RNA–Protein interactions for RNA: ENST00000456128.5

TOM1-212, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 1,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-212ENST00000456128 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
TOM1-212ENST00000456128 RIPK4P57078 832 aa20.69■□□□□ 0.9
TOM1-212ENST00000456128 CCDC146Q8IYE0 955 aa20.69■□□□□ 0.9
TOM1-212ENST00000456128 RUNDC1Q96C34 613 aa20.69■□□□□ 0.9
TOM1-212ENST00000456128 PNISRQ8TF01 805 aaKnown RBP20.68■□□□□ 0.9
TOM1-212ENST00000456128 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
TOM1-212ENST00000456128 USP42Q9H9J4 1324 aaKnown RBP20.68■□□□□ 0.9
TOM1-212ENST00000456128 C4AP0C0L4 1744 aa20.67■□□□□ 0.9
TOM1-212ENST00000456128 MMP10P09238 476 aa20.67■□□□□ 0.9
TOM1-212ENST00000456128 LMOD3Q0VAK6 560 aa20.67■□□□□ 0.9
TOM1-212ENST00000456128 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
TOM1-212ENST00000456128 COL15A1P39059 1388 aa20.67■□□□□ 0.9
TOM1-212ENST00000456128 ANP32CO43423 234 aa20.66■□□□□ 0.9
TOM1-212ENST00000456128 SNRPA1P09661 255 aaKnown RBP20.66■□□□□ 0.9
TOM1-212ENST00000456128 CANXP27824 592 aaKnown RBP20.66■□□□□ 0.9
TOM1-212ENST00000456128 SRP68Q9UHB9 627 aaKnown RBP20.66■□□□□ 0.9
TOM1-212ENST00000456128 CD2APQ9Y5K6 639 aa20.66■□□□□ 0.9
TOM1-212ENST00000456128 ZPR1O75312 459 aa20.65■□□□□ 0.9
TOM1-212ENST00000456128 NLGN2Q8NFZ4 835 aa20.65■□□□□ 0.9
TOM1-212ENST00000456128 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.89
TOM1-212ENST00000456128 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
TOM1-212ENST00000456128 FKBP8Q14318 412 aa20.63■□□□□ 0.89
TOM1-212ENST00000456128 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
TOM1-212ENST00000456128 NARFQ9UHQ1 456 aa20.63■□□□□ 0.89
TOM1-212ENST00000456128 USP16Q9Y5T5 823 aa20.63■□□□□ 0.89
TOM1-212ENST00000456128 PRAMEF22A3QJZ6 481 aa20.62■□□□□ 0.89
TOM1-212ENST00000456128 A1BGP04217 495 aa20.62■□□□□ 0.89
TOM1-212ENST00000456128 IL6STP40189 918 aaPredicted RBP20.62■□□□□ 0.89
TOM1-212ENST00000456128 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
TOM1-212ENST00000456128 A0A087WZG4 1122 aa20.61■□□□□ 0.89
TOM1-212ENST00000456128 CCDC184Q52MB2 194 aa20.61■□□□□ 0.89
TOM1-212ENST00000456128 PARP3Q9Y6F1 533 aa20.61■□□□□ 0.89
TOM1-212ENST00000456128 KDM3BQ7LBC6 1761 aa20.6■□□□□ 0.89
TOM1-212ENST00000456128 EIF4A1P60842 406 aaKnown RBP20.6■□□□□ 0.89
TOM1-212ENST00000456128 BABAM1Q9NWV8 329 aa20.6■□□□□ 0.89
TOM1-212ENST00000456128 TRIM35Q9UPQ4 493 aa20.6■□□□□ 0.89
TOM1-212ENST00000456128 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
TOM1-212ENST00000456128 TSPYL4Q9UJ04 414 aa20.59■□□□□ 0.89
TOM1-212ENST00000456128 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.89
TOM1-212ENST00000456128 TM4SF1P30408 202 aa20.58■□□□□ 0.89
TOM1-212ENST00000456128 ZNF330Q9Y3S2 320 aaPredicted RBP20.58■□□□□ 0.89
TOM1-212ENST00000456128 GPR162Q16538 588 aa20.57■□□□□ 0.88
TOM1-212ENST00000456128 BCL2L12Q9HB09 334 aa20.57■□□□□ 0.88
TOM1-212ENST00000456128 C10orf71Q711Q0 1435 aa20.56■□□□□ 0.88
TOM1-212ENST00000456128 APAF1O14727 1248 aa20.56■□□□□ 0.88
TOM1-212ENST00000456128 DDR1Q08345 913 aa20.56■□□□□ 0.88
TOM1-212ENST00000456128 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
TOM1-212ENST00000456128 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
TOM1-212ENST00000456128 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
TOM1-212ENST00000456128 TBC1D2BQ9UPU7 963 aa20.55■□□□□ 0.88
TOM1-212ENST00000456128 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
TOM1-212ENST00000456128 NFIXQ14938 502 aa20.54■□□□□ 0.88
TOM1-212ENST00000456128 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
TOM1-212ENST00000456128 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
TOM1-212ENST00000456128 NBPF15Q8N660 670 aa20.54■□□□□ 0.88
TOM1-212ENST00000456128 CHL1O00533 1208 aa20.53■□□□□ 0.88
TOM1-212ENST00000456128 TGFB2P61812 414 aa20.53■□□□□ 0.88
TOM1-212ENST00000456128 LAMB4A4D0S4 1761 aa20.52■□□□□ 0.88
TOM1-212ENST00000456128 CAMTA2O94983 1202 aa20.52■□□□□ 0.88
TOM1-212ENST00000456128 DZIP3Q86Y13 1208 aaKnown RBP20.52■□□□□ 0.88
TOM1-212ENST00000456128 SCN7AQ01118 1682 aa20.51■□□□□ 0.87
TOM1-212ENST00000456128 PXDNLA1KZ92 1463 aa20.51■□□□□ 0.87
TOM1-212ENST00000456128 KIF13BQ9NQT8 1826 aa20.51■□□□□ 0.87
TOM1-212ENST00000456128 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
TOM1-212ENST00000456128 LAS1LQ9Y4W2 734 aaKnown RBP20.5■□□□□ 0.87
TOM1-212ENST00000456128 GRIN3BO60391 1043 aa20.49■□□□□ 0.87
TOM1-212ENST00000456128 TBC1D9BQ66K14 1250 aa20.49■□□□□ 0.87
TOM1-212ENST00000456128 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
TOM1-212ENST00000456128 SERPINB2P05120 415 aa20.48■□□□□ 0.87
TOM1-212ENST00000456128 YY1P25490 414 aa20.48■□□□□ 0.87
TOM1-212ENST00000456128 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
TOM1-212ENST00000456128 CLEC4GQ6UXB4 293 aa20.48■□□□□ 0.87
TOM1-212ENST00000456128 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
TOM1-212ENST00000456128 ERBB4Q15303 1308 aa20.48■□□□□ 0.87
TOM1-212ENST00000456128 A0A0G2JLW4 131 aa20.47■□□□□ 0.87
TOM1-212ENST00000456128 RGL2O15211 777 aa20.47■□□□□ 0.87
TOM1-212ENST00000456128 ZNF652Q9Y2D9 606 aa20.47■□□□□ 0.87
TOM1-212ENST00000456128 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
TOM1-212ENST00000456128 DPEP1P16444 411 aa20.46■□□□□ 0.87
TOM1-212ENST00000456128 KIAA1551Q9HCM1 1747 aa20.46■□□□□ 0.87
TOM1-212ENST00000456128 NRXN2Q9P2S2 1712 aa20.46■□□□□ 0.87
TOM1-212ENST00000456128 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
TOM1-212ENST00000456128 ZNF853P0CG23 659 aa20.45■□□□□ 0.86
TOM1-212ENST00000456128 SETDB2Q96T68 719 aa20.45■□□□□ 0.86
TOM1-212ENST00000456128 IFT57Q9NWB7 429 aa20.45■□□□□ 0.86
TOM1-212ENST00000456128 WWC3Q9ULE0 1092 aa20.45■□□□□ 0.86
TOM1-212ENST00000456128 MYL6BP14649 208 aa20.44■□□□□ 0.86
TOM1-212ENST00000456128 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
TOM1-212ENST00000456128 GNAI1P63096 354 aa20.44■□□□□ 0.86
TOM1-212ENST00000456128 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
TOM1-212ENST00000456128 KCNA3P22001 575 aa20.43■□□□□ 0.86
TOM1-212ENST00000456128 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
TOM1-212ENST00000456128 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
TOM1-212ENST00000456128 NGEFQ8N5V2 710 aa20.43■□□□□ 0.86
TOM1-212ENST00000456128 MBIPQ9NS73 344 aa20.43■□□□□ 0.86
TOM1-212ENST00000456128 N4BP2Q86UW6 1770 aaPredicted RBP20.42■□□□□ 0.86
TOM1-212ENST00000456128 AFDNP55196 1824 aaKnown RBP20.42■□□□□ 0.86
TOM1-212ENST00000456128 ERVV-1B6SEH8 477 aa20.42■□□□□ 0.86
TOM1-212ENST00000456128 HOXB7P09629 217 aa20.42■□□□□ 0.86
TOM1-212ENST00000456128 PDIA6Q15084 440 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms