RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 ABL2P42684 1182 aa7.97□□□□□ -1.13
R3HDM1-212ENST00000456040 NLRP8Q86W28 1048 aa7.97□□□□□ -1.13
R3HDM1-212ENST00000456040 C1orf216Q8TAB5 229 aa7.97□□□□□ -1.13
R3HDM1-212ENST00000456040 AVENQ9NQS1 362 aaPredicted RBP7.97□□□□□ -1.13
R3HDM1-212ENST00000456040 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
R3HDM1-212ENST00000456040 EIF4G2P78344 907 aaKnown RBP eCLIP7.96□□□□□ -1.14
R3HDM1-212ENST00000456040 IRF5Q13568 498 aa7.96□□□□□ -1.14
R3HDM1-212ENST00000456040 PLVAPQ9BX97 442 aa7.96□□□□□ -1.14
R3HDM1-212ENST00000456040 ZCCHC2Q9C0B9 1178 aaKnown RBP7.96□□□□□ -1.14
R3HDM1-212ENST00000456040 ZFP64Q9NPA5 681 aa7.96□□□□□ -1.14
R3HDM1-212ENST00000456040 PRR12Q9ULL5 1215 aa7.96□□□□□ -1.14
R3HDM1-212ENST00000456040 ATXN7O15265 892 aaPredicted RBP7.95□□□□□ -1.14
R3HDM1-212ENST00000456040 ALAS2P22557 587 aa7.95□□□□□ -1.14
R3HDM1-212ENST00000456040 WASHC4Q2M389 1173 aa7.95□□□□□ -1.14
R3HDM1-212ENST00000456040 FHDC1Q9C0D6 1143 aaPredicted RBP7.95□□□□□ -1.14
R3HDM1-212ENST00000456040 RAD21O60216 631 aa7.94□□□□□ -1.14
R3HDM1-212ENST00000456040 USP4Q13107 963 aa7.94□□□□□ -1.14
R3HDM1-212ENST00000456040 TLR1Q15399 786 aa7.94□□□□□ -1.14
R3HDM1-212ENST00000456040 PPARGC1BQ86YN6 1023 aaKnown RBP7.94□□□□□ -1.14
R3HDM1-212ENST00000456040 AIDAQ96BJ3 306 aa7.94□□□□□ -1.14
R3HDM1-212ENST00000456040 COG6Q9Y2V7 657 aa7.94□□□□□ -1.14
R3HDM1-212ENST00000456040 GJA3Q9Y6H8 435 aa7.94□□□□□ -1.14
R3HDM1-212ENST00000456040 UBTFP17480 764 aaKnown RBP7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 ITGB7P26010 798 aa7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 PLA2G4AP47712 749 aa7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 ARSJQ5FYB0 599 aaPredicted RBP7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 FAM182BQ5T319 152 aa7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 SIRT1Q96EB6 747 aa7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 HRH3Q9Y5N1 445 aa7.93□□□□□ -1.14
R3HDM1-212ENST00000456040 VAC14Q08AM6 782 aa7.92□□□□□ -1.14
R3HDM1-212ENST00000456040 KRTAP1-3Q8IUG1 177 aa7.92□□□□□ -1.14
R3HDM1-212ENST00000456040 NACC1Q96RE7 527 aa7.92□□□□□ -1.14
R3HDM1-212ENST00000456040 KHNYNO15037 678 aaKnown RBP7.91□□□□□ -1.14
R3HDM1-212ENST00000456040 RSPO4Q2I0M5 234 aaPredicted RBP7.91□□□□□ -1.14
R3HDM1-212ENST00000456040 NBPF1Q3BBV0 1214 aa7.91□□□□□ -1.14
R3HDM1-212ENST00000456040 ARTNQ5T4W7 220 aa7.91□□□□□ -1.14
R3HDM1-212ENST00000456040 NIFKQ9BYG3 293 aaKnown RBP7.91□□□□□ -1.14
R3HDM1-212ENST00000456040 CEP126Q9P2H0 1117 aa7.91□□□□□ -1.14
R3HDM1-212ENST00000456040 MAPTP10636 758 aaKnown RBP7.9□□□□□ -1.14
R3HDM1-212ENST00000456040 TATP17735 454 aaPredicted RBP7.9□□□□□ -1.14
R3HDM1-212ENST00000456040 SOX11P35716 441 aa7.9□□□□□ -1.14
R3HDM1-212ENST00000456040 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
R3HDM1-212ENST00000456040 CD33P20138 364 aa7.89□□□□□ -1.15
R3HDM1-212ENST00000456040 TRIM11Q96F44 468 aa7.89□□□□□ -1.15
R3HDM1-212ENST00000456040 POM121Q96HA1 1249 aa7.89□□□□□ -1.15
R3HDM1-212ENST00000456040 BTBD11A6QL63 1104 aa7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 PCBP4P57723 403 aaKnown RBP7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 TNP2Q05952 138 aa7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 TRIM28Q13263 835 aaKnown RBP7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 SEMA3FQ13275 785 aa7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 NKAPLQ5M9Q1 402 aa7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 ZNF468Q5VIY5 522 aaPredicted RBP7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 FCHSD1Q86WN1 690 aa7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 CDCA7Q9BWT1 371 aaPredicted RBP7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 DOLKQ9UPQ8 538 aa7.88□□□□□ -1.15
R3HDM1-212ENST00000456040 A0A1W2PNR3 127 aa7.87□□□□□ -1.15
R3HDM1-212ENST00000456040 DYRK3O43781 588 aa7.87□□□□□ -1.15
R3HDM1-212ENST00000456040 SLFNL1Q499Z3 407 aa7.87□□□□□ -1.15
R3HDM1-212ENST00000456040 LCE3BQ5TA77 95 aa7.87□□□□□ -1.15
R3HDM1-212ENST00000456040 TPSG1Q9NRR2 321 aa7.87□□□□□ -1.15
R3HDM1-212ENST00000456040 DNAAF2Q9NVR5 837 aaKnown RBP7.87□□□□□ -1.15
R3HDM1-212ENST00000456040 ELOA3CA0A087WX78 387 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-212ENST00000456040 ELOA3DA6NLF2 546 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-212ENST00000456040 ELOA3BQ3SY89 546 aa7.86□□□□□ -1.15
R3HDM1-212ENST00000456040 ELOA3Q8NG57 546 aa7.86□□□□□ -1.15
R3HDM1-212ENST00000456040 CCDC85AQ96PX6 553 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-212ENST00000456040 ETNK1Q9HBU6 452 aa7.86□□□□□ -1.15
R3HDM1-212ENST00000456040 MARK1Q9P0L2 795 aa7.86□□□□□ -1.15
R3HDM1-212ENST00000456040 KLF15Q9UIH9 416 aa7.85□□□□□ -1.15
R3HDM1-212ENST00000456040 FAM157BP0CG42 384 aa7.84□□□□□ -1.15
R3HDM1-212ENST00000456040 LAMC2Q13753 1193 aa7.84□□□□□ -1.15
R3HDM1-212ENST00000456040 PRSS36Q5K4E3 855 aa7.84□□□□□ -1.15
R3HDM1-212ENST00000456040 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.15
R3HDM1-212ENST00000456040 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
R3HDM1-212ENST00000456040 ATP4AP20648 1035 aa7.83□□□□□ -1.16
R3HDM1-212ENST00000456040 NEUROD4Q9HD90 331 aa7.83□□□□□ -1.16
R3HDM1-212ENST00000456040 INHAP05111 366 aa7.82□□□□□ -1.16
R3HDM1-212ENST00000456040 SMTNP53814 917 aa7.82□□□□□ -1.16
R3HDM1-212ENST00000456040 GDF10P55107 478 aa7.82□□□□□ -1.16
R3HDM1-212ENST00000456040 NEUROD1Q13562 356 aa7.82□□□□□ -1.16
R3HDM1-212ENST00000456040 OXLD1Q5BKU9 147 aa7.82□□□□□ -1.16
R3HDM1-212ENST00000456040 ZDHHC3Q9NYG2 299 aa7.82□□□□□ -1.16
R3HDM1-212ENST00000456040 C9orf172C9J069 976 aa7.81□□□□□ -1.16
R3HDM1-212ENST00000456040 LRP8Q14114 963 aa7.81□□□□□ -1.16
R3HDM1-212ENST00000456040 CLUAP1Q96AJ1 413 aa7.81□□□□□ -1.16
R3HDM1-212ENST00000456040 ALG2Q9H553 416 aa7.81□□□□□ -1.16
R3HDM1-212ENST00000456040 CHIC2Q9UKJ5 165 aa7.81□□□□□ -1.16
R3HDM1-212ENST00000456040 MAP7D1Q3KQU3 841 aa7.8□□□□□ -1.16
R3HDM1-212ENST00000456040 TSGA10IPQ3SY00 556 aa7.8□□□□□ -1.16
R3HDM1-212ENST00000456040 FOXD4L6Q3SYB3 417 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-212ENST00000456040 SAMD5Q5TGI4 173 aa7.8□□□□□ -1.16
R3HDM1-212ENST00000456040 FOXD4L3Q6VB84 417 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-212ENST00000456040 SYT9Q86SS6 491 aa7.8□□□□□ -1.16
R3HDM1-212ENST00000456040 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-212ENST00000456040 M0R082 166 aa7.79□□□□□ -1.16
R3HDM1-212ENST00000456040 SIN3BO75182 1162 aa7.79□□□□□ -1.16
R3HDM1-212ENST00000456040 H2AFB1P0C5Y9 115 aa7.79□□□□□ -1.16
R3HDM1-212ENST00000456040 H2AFB2P0C5Z0 115 aa7.79□□□□□ -1.16
R3HDM1-212ENST00000456040 ZNF417Q8TAU3 575 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms