RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 IL25Q9H293 177 aa21.43■■□□□ 1.02
PTPN6-204ENST00000456013 IL1RAPL2Q9NP60 686 aa21.43■■□□□ 1.02
PTPN6-204ENST00000456013 USP54Q70EL1 1684 aa21.43■■□□□ 1.02
PTPN6-204ENST00000456013 WDR33Q9C0J8 1336 aaKnown RBP21.43■■□□□ 1.02
PTPN6-204ENST00000456013 HOXC9P31274 260 aa21.43■■□□□ 1.02
PTPN6-204ENST00000456013 POLA2Q14181 598 aa21.43■■□□□ 1.02
PTPN6-204ENST00000456013 CCDC39Q9UFE4 941 aa21.43■■□□□ 1.02
PTPN6-204ENST00000456013 TSPY26PQ9H489 355 aa21.42■■□□□ 1.02
PTPN6-204ENST00000456013 NLRP6P59044 892 aa21.41■■□□□ 1.02
PTPN6-204ENST00000456013 NUTM1Q86Y26 1132 aa21.41■■□□□ 1.02
PTPN6-204ENST00000456013 PI4K2BQ8TCG2 481 aa21.4■■□□□ 1.02
PTPN6-204ENST00000456013 KIF13AQ9H1H9 1805 aa21.4■■□□□ 1.02
PTPN6-204ENST00000456013 HDGFL1Q5TGJ6 251 aa21.4■■□□□ 1.02
PTPN6-204ENST00000456013 PPP1R42Q7Z4L9 355 aa21.4■■□□□ 1.02
PTPN6-204ENST00000456013 EID1Q9Y6B2 187 aa21.4■■□□□ 1.02
PTPN6-204ENST00000456013 RAD50Q92878 1312 aa21.4■■□□□ 1.02
PTPN6-204ENST00000456013 SURF6O75683 361 aaKnown RBP21.39■■□□□ 1.02
PTPN6-204ENST00000456013 RHPN1Q8TCX5 695 aa21.39■■□□□ 1.02
PTPN6-204ENST00000456013 PHAXQ9H814 394 aaKnown RBP21.39■■□□□ 1.02
PTPN6-204ENST00000456013 TBX22Q9Y458 520 aa21.39■■□□□ 1.02
PTPN6-204ENST00000456013 SGSM2O43147 1006 aa21.39■■□□□ 1.01
PTPN6-204ENST00000456013 PHF14O94880 888 aa21.39■■□□□ 1.01
PTPN6-204ENST00000456013 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
PTPN6-204ENST00000456013 USP48Q86UV5 1035 aa21.38■■□□□ 1.01
PTPN6-204ENST00000456013 RNF214Q8ND24 703 aa21.38■■□□□ 1.01
PTPN6-204ENST00000456013 TMEM87AQ8NBN3 555 aa21.38■■□□□ 1.01
PTPN6-204ENST00000456013 KIF1BPQ96EK5 621 aa21.38■■□□□ 1.01
PTPN6-204ENST00000456013 SLIT1O75093 1534 aa21.37■■□□□ 1.01
PTPN6-204ENST00000456013 GADD45BO75293 160 aaPredicted RBP21.37■■□□□ 1.01
PTPN6-204ENST00000456013 XPCQ01831 940 aaPredicted RBP21.37■■□□□ 1.01
PTPN6-204ENST00000456013 CSPP1Q1MSJ5 1256 aa21.37■■□□□ 1.01
PTPN6-204ENST00000456013 RPAP1Q9BWH6 1393 aaPredicted RBP21.37■■□□□ 1.01
PTPN6-204ENST00000456013 TTC14Q96N46 770 aa21.37■■□□□ 1.01
PTPN6-204ENST00000456013 SNX14Q9Y5W7 946 aa21.37■■□□□ 1.01
PTPN6-204ENST00000456013 R3HCC1Q9Y3T6 440 aaKnown RBP21.36■■□□□ 1.01
PTPN6-204ENST00000456013 ANKARQ7Z5J8 1434 aa21.36■■□□□ 1.01
PTPN6-204ENST00000456013 ARHGAP23Q9P227 1491 aa21.36■■□□□ 1.01
PTPN6-204ENST00000456013 CNTROBQ8N137 903 aa21.36■■□□□ 1.01
PTPN6-204ENST00000456013 LSG1Q9H089 658 aaKnown RBP21.36■■□□□ 1.01
PTPN6-204ENST00000456013 PDCL3Q9H2J4 239 aa21.36■■□□□ 1.01
PTPN6-204ENST00000456013 GDPD2Q9HCC8 539 aa21.36■■□□□ 1.01
PTPN6-204ENST00000456013 MAP4K4O95819 1239 aaPredicted RBP21.35■■□□□ 1.01
PTPN6-204ENST00000456013 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
PTPN6-204ENST00000456013 CEMIPQ8WUJ3 1361 aa21.34■■□□□ 1.01
PTPN6-204ENST00000456013 KDM3BQ7LBC6 1761 aa21.34■■□□□ 1.01
PTPN6-204ENST00000456013 MED1Q15648 1581 aaPredicted RBP21.34■■□□□ 1.01
PTPN6-204ENST00000456013 FOXD4L6Q3SYB3 417 aaPredicted RBP21.33■■□□□ 1.01
PTPN6-204ENST00000456013 FOXD4L3Q6VB84 417 aaPredicted RBP21.33■■□□□ 1.01
PTPN6-204ENST00000456013 FAM184AQ8NB25 1140 aa21.33■■□□□ 1.01
PTPN6-204ENST00000456013 USP42Q9H9J4 1324 aaKnown RBP21.33■■□□□ 1.01
PTPN6-204ENST00000456013 UVSSAQ2YD98 709 aa21.33■■□□□ 1
PTPN6-204ENST00000456013 HSP90AB4PQ58FF6 505 aa21.33■■□□□ 1
PTPN6-204ENST00000456013 HOXB7P09629 217 aa21.32■■□□□ 1
PTPN6-204ENST00000456013 NBPF7P0C2Y1 421 aaPredicted RBP21.32■■□□□ 1
PTPN6-204ENST00000456013 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
PTPN6-204ENST00000456013 AK2P54819 239 aa21.32■■□□□ 1
PTPN6-204ENST00000456013 BEND3Q5T5X7 828 aa21.32■■□□□ 1
PTPN6-204ENST00000456013 NUTM2GQ5VZR2 741 aa21.32■■□□□ 1
PTPN6-204ENST00000456013 LTV1Q96GA3 475 aaPredicted RBP21.32■■□□□ 1
PTPN6-204ENST00000456013 LIMCH1Q9UPQ0 1083 aa21.32■■□□□ 1
PTPN6-204ENST00000456013 LTN1O94822 1766 aa21.32■■□□□ 1
PTPN6-204ENST00000456013 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
PTPN6-204ENST00000456013 RASEFQ8IZ41 740 aa21.31■■□□□ 1
PTPN6-204ENST00000456013 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
PTPN6-204ENST00000456013 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.31■■□□□ 1
PTPN6-204ENST00000456013 CCDC183Q5T5S1 534 aa21.31■■□□□ 1
PTPN6-204ENST00000456013 DNAAF4Q8WXU2 420 aa21.31■■□□□ 1
PTPN6-204ENST00000456013 TTC41PQ6P2S7 1318 aa21.3■■□□□ 1
PTPN6-204ENST00000456013 RUFY3Q7L099 469 aa21.3■■□□□ 1
PTPN6-204ENST00000456013 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
PTPN6-204ENST00000456013 ABTB2Q8N961 1025 aa21.3■■□□□ 1
PTPN6-204ENST00000456013 STX6O43752 255 aa21.29■■□□□ 1
PTPN6-204ENST00000456013 LETM1O95202 739 aaPredicted RBP21.29■■□□□ 1
PTPN6-204ENST00000456013 CNPY2Q9Y2B0 182 aa21.29■■□□□ 1
PTPN6-204ENST00000456013 PTMAP06454 111 aaKnown RBP21.29■■□□□ 1
PTPN6-204ENST00000456013 SYT1P21579 422 aa21.29■■□□□ 1
PTPN6-204ENST00000456013 PI4KAP2A4QPH2 592 aa21.28■■□□□ 1
PTPN6-204ENST00000456013 GLRX3O76003 335 aaKnown RBP21.28■■□□□ 1
PTPN6-204ENST00000456013 CWC27Q6UX04 472 aaKnown RBP21.28■■□□□ 1
PTPN6-204ENST00000456013 USHBP1Q8N6Y0 703 aa21.28■■□□□ 1
PTPN6-204ENST00000456013 PI4KAP1Q8N8J0 262 aa21.28■■□□□ 1
PTPN6-204ENST00000456013 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
PTPN6-204ENST00000456013 UBE2HP62256 183 aa21.28■■□□□ 1
PTPN6-204ENST00000456013 F13A1P00488 732 aa21.27■■□□□ 1
PTPN6-204ENST00000456013 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
PTPN6-204ENST00000456013 KLHL34Q8N239 644 aa21.27■■□□□ 1
PTPN6-204ENST00000456013 SMC3Q9UQE7 1217 aa21.27■■□□□ 1
PTPN6-204ENST00000456013 UQCRHLA0A096LP55 91 aa21.26■□□□□ 0.99
PTPN6-204ENST00000456013 UQCRHP07919 91 aa21.26■□□□□ 0.99
PTPN6-204ENST00000456013 MTX1Q13505 466 aa21.26■□□□□ 0.99
PTPN6-204ENST00000456013 RUFY2Q8WXA3 655 aa21.26■□□□□ 0.99
PTPN6-204ENST00000456013 ATP6V1DQ9Y5K8 247 aa21.26■□□□□ 0.99
PTPN6-204ENST00000456013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.26■□□□□ 0.99
PTPN6-204ENST00000456013 SPG7Q9UQ90 795 aa21.26■□□□□ 0.99
PTPN6-204ENST00000456013 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
PTPN6-204ENST00000456013 CASTP20810 708 aaKnown RBP21.25■□□□□ 0.99
PTPN6-204ENST00000456013 KIAA2012Q0VF49 1180 aa21.25■□□□□ 0.99
PTPN6-204ENST00000456013 SASS6Q6UVJ0 657 aa21.25■□□□□ 0.99
PTPN6-204ENST00000456013 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
PTPN6-204ENST00000456013 DIAPH3Q9NSV4 1193 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms