RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TICAM2Q86XR7 235 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 L3MBTL2Q969R5 705 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 VCX3BQ9H321 246 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 RMND1Q9NWS8 449 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 CCDC9Q9Y3X0 531 aaKnown RBP6.03□□□□□ -1.44
CSMD3-204ENST00000455883 STK24Q9Y6E0 443 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 TRHP20396 242 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-204ENST00000455883 MAP2K1Q02750 393 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-204ENST00000455883 KLHL40Q2TBA0 621 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 PPFIBP2Q8ND30 876 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 IL16Q14005 1332 aa6.03□□□□□ -1.44
CSMD3-204ENST00000455883 STK38Q15208 465 aa6.02□□□□□ -1.44
CSMD3-204ENST00000455883 VCXQ9H320 206 aa6.02□□□□□ -1.44
CSMD3-204ENST00000455883 SERPINC1P01008 464 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 RPAP2Q8IXW5 612 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-204ENST00000455883 AMPHP49418 695 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 AMPD3Q01432 767 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 ARHGAP5Q13017 1502 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 KNTC1P50748 2209 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 EBAG9O00559 213 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 GNAI2P04899 355 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 CCDC14Q49A88 953 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 DIAPH1O60610 1272 aaKnown RBP6.02□□□□□ -1.45
CSMD3-204ENST00000455883 LUC7L3O95232 432 aaKnown RBP6.02□□□□□ -1.45
CSMD3-204ENST00000455883 HAUS2Q9NVX0 235 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 GRIN2BQ13224 1484 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 MYO5CQ9NQX4 1742 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 UBTFL1P0CB47 393 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-204ENST00000455883 MCM4P33991 863 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 MAP3K9P80192 1104 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 ERCC6LQ2NKX8 1250 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 NFXL1Q6ZNB6 911 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 VPS37DQ86XT2 251 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 KDM5DQ9BY66 1539 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 TCHPQ9BT92 498 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 AKAP2Q9Y2D5 859 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 TACC1O75410 805 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 THEGQ9P2T0 379 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 HSP90AB3PQ58FF7 597 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 VPS37CA5D8V6 355 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-204ENST00000455883 USP5P45974 858 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 PPFIA1Q13136 1202 aa6.02□□□□□ -1.45
CSMD3-204ENST00000455883 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-204ENST00000455883 CTDP1Q9Y5B0 961 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-204ENST00000455883 FRAT2O75474 233 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 FERP16591 822 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 SLC52A1Q9NWF4 448 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 TNIP1Q15025 636 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 FSD1Q9BTV5 496 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 HIRIP3Q9BW71 556 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 YEATS4O95619 227 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 NOL3O60936 208 aaKnown RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 UBE2HP62256 183 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 TMED8Q6PL24 325 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 BICDL1Q6ZP65 573 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 LMBR1Q8WVP7 490 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 PTPRCP08575 1304 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 SMAP1Q8IYB5 467 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 NLRP5P59047 1200 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 TRIM14Q14142 442 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 GBP6Q6ZN66 633 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 LUC7L2Q9Y383 392 aaKnown RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 PPFIA2O75334 1257 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 IRX3P78415 501 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 RNF41Q9H4P4 317 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-204ENST00000455883 G3V3G9 751 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 DCAF8Q5TAQ9 597 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 CCDC174Q6PII3 467 aa6.01□□□□□ -1.45
CSMD3-204ENST00000455883 FOXD1Q16676 465 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 BMP2KLQ5H9B9 411 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 PHLDB2Q86SQ0 1253 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 IKBKGQ9Y6K9 419 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 FANCD2Q9BXW9 1451 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 LRPPRCP42704 1394 aaKnown RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 APOBRQ0VD83 1088 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 C9orf84Q5VXU9 1444 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 IBTKQ9P2D0 1353 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 DNAJC8O75937 253 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 DEUP1Q05D60 604 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 GIGYF1O75420 1035 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 AMOTQ4VCS5 1084 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 CCDC155Q8N6L0 562 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 KRI1Q8N9T8 703 aaKnown RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 ZNF692Q9BU19 519 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 FEZ2Q9UHY8 353 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 GOLGA6CA6NDK9 693 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 GOLGA6BA6NDN3 693 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 EVI5O60447 810 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 GOLGA6DP0CG33 693 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 TSNAXIP1Q2TAA8 658 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 KLHL10Q6JEL2 608 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 SLF2Q8IX21 1173 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 SPATA32Q96LK8 384 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 C16orf45Q96MC5 204 aaPredicted RBP6□□□□□ -1.45
CSMD3-204ENST00000455883 GOLGA6AQ9NYA3 693 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 ANKRD62A6NC57 917 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 STMN1P16949 149 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 LMOD2Q6P5Q4 547 aa6□□□□□ -1.45
CSMD3-204ENST00000455883 KCNG1Q9UIX4 513 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms