RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 NAALADL2Q58DX5 795 aa7.07□□□□□ -1.28
HMGB1P4-201ENST00000455362 NPAS4Q8IUM7 802 aa7.07□□□□□ -1.28
HMGB1P4-201ENST00000455362 ANKRD13AQ8IZ07 590 aa7.07□□□□□ -1.28
HMGB1P4-201ENST00000455362 C14orf93Q9H972 538 aaKnown RBP7.07□□□□□ -1.28
HMGB1P4-201ENST00000455362 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP47Q96K76 1375 aa7.07□□□□□ -1.28
HMGB1P4-201ENST00000455362 KDM5AP29375 1690 aaKnown RBP7.06□□□□□ -1.28
HMGB1P4-201ENST00000455362 NLRP1Q9C000 1473 aa7.06□□□□□ -1.28
HMGB1P4-201ENST00000455362 DIEXFQ68CQ4 756 aaKnown RBP7.06□□□□□ -1.28
HMGB1P4-201ENST00000455362 SLF2Q8IX21 1173 aa7.06□□□□□ -1.28
HMGB1P4-201ENST00000455362 UBR1Q8IWV7 1749 aa7.06□□□□□ -1.28
HMGB1P4-201ENST00000455362 LAMC1P11047 1609 aa7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 PIK3C2GO75747 1445 aa7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 RIMS2Q9UQ26 1411 aa7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 ST20-MTHFSA0A0A6YYL1 179 aa7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 C11orf95C9JLR9 678 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 GUCA2AQ02747 115 aa7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 THEMISQ8N1K5 641 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 EPS8L1Q8TE68 723 aa7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L3A6NCW0 530 aa7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L4A6NCW7 530 aa7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 ATP2B4P23634 1241 aa7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 LARP1Q6PKG0 1096 aaKnown RBP7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L2Q6R6M4 530 aa7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L1Q7RTZ2 530 aa7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 FAM200AQ8TCP9 573 aa7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 TMEM2Q9UHN6 1383 aa7.04□□□□□ -1.28
HMGB1P4-201ENST00000455362 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 ANKRD62A6NC57 917 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 FAM196BA6NMK8 535 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L15C9J2P7 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L10C9JJH3 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L13C9JLJ4 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L12C9JPN9 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L11C9JVI0 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L21D6R901 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L18D6R9N7 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L22D6RA61 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L17D6RBQ6 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L19D6RCP7 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 CFAP99D6REC4 459 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L20D6RJB6 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 SLC10A3P09131 477 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 SKIP12755 728 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 USP17L24Q0WX57 530 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 TMEM132EQ6IEE7 984 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 NFATC2IPQ8NCF5 419 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 CLP1Q92989 425 aaKnown RBP7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 RABGEF1Q9UJ41 708 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 PTPRMP28827 1452 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 SETBP1Q9Y6X0 1596 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 IQGAP1P46940 1657 aa7.03□□□□□ -1.28
HMGB1P4-201ENST00000455362 LTKP29376 864 aa7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 ATP6V1AP38606 617 aa7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 DDX10Q13206 875 aaKnown RBP7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 NR6A1Q15406 480 aa7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 TSNAXIP1Q2TAA8 658 aa7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 HLA-CQ95604 372 aa7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 TESK2Q96S53 571 aa7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 CWC22Q9HCG8 908 aaKnown RBP7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 SCAF11Q99590 1463 aaKnown RBP7.02□□□□□ -1.29
HMGB1P4-201ENST00000455362 MYO3AQ8NEV4 1616 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 ADGRB1O14514 1584 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 ARHGAP23Q9P227 1491 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 CCDC7Q96M83 1385 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 USP17L5A8MUK1 530 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 RECKO95980 971 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 ERCC5P28715 1186 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 FUT2Q10981 343 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 KMT5BQ4FZB7 885 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 PLEKHM2Q8IWE5 1019 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 EID1Q9Y6B2 187 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 POLR1AO95602 1720 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 ALKQ9UM73 1620 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 SLIT1O75093 1534 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 KIF7Q2M1P5 1343 aa7.01□□□□□ -1.29
HMGB1P4-201ENST00000455362 CEP170BQ9Y4F5 1589 aaPredicted RBP7□□□□□ -1.29
HMGB1P4-201ENST00000455362 CFHP08603 1231 aa7□□□□□ -1.29
HMGB1P4-201ENST00000455362 RASA1P20936 1047 aa7□□□□□ -1.29
HMGB1P4-201ENST00000455362 NR1H3Q13133 447 aa7□□□□□ -1.29
HMGB1P4-201ENST00000455362 Q3C1V9 767 aa7□□□□□ -1.29
HMGB1P4-201ENST00000455362 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
HMGB1P4-201ENST00000455362 RETREG3Q86VR2 466 aa7□□□□□ -1.29
HMGB1P4-201ENST00000455362 CDCA7Q9BWT1 371 aaPredicted RBP7□□□□□ -1.29
HMGB1P4-201ENST00000455362 SLAIN2Q9P270 581 aa7□□□□□ -1.29
HMGB1P4-201ENST00000455362 MKRN1Q9UHC7 482 aaKnown RBP7□□□□□ -1.29
HMGB1P4-201ENST00000455362 TRAK1Q9UPV9 953 aa7□□□□□ -1.29
HMGB1P4-201ENST00000455362 EIF3AQ14152 1382 aaKnown RBP6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 PLEKHG1Q9ULL1 1385 aa6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 NRXN3Q9Y4C0 1643 aa6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 ABL1P00519 1130 aa6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 FAM98CQ17RN3 349 aaKnown RBP6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 DEPDC4Q8N2C3 294 aa6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 ZNF592Q92610 1267 aa6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 STK26Q9P289 416 aa6.99□□□□□ -1.29
HMGB1P4-201ENST00000455362 ZNF142P52746 1687 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms