RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 USPL1Q5W0Q7 1092 aa27.11■■□□□ 1.93
CCHCR1-209ENST00000455279 VSIG10Q8N0Z9 540 aa27.11■■□□□ 1.93
CCHCR1-209ENST00000455279 C10orf71Q711Q0 1435 aa27.1■■□□□ 1.93
CCHCR1-209ENST00000455279 BTBD11A6QL63 1104 aa27.1■■□□□ 1.93
CCHCR1-209ENST00000455279 BCL2L12Q9HB09 334 aa27.1■■□□□ 1.93
CCHCR1-209ENST00000455279 PXDNLA1KZ92 1463 aa27.1■■□□□ 1.93
CCHCR1-209ENST00000455279 COL15A1P39059 1388 aa27.09■■□□□ 1.93
CCHCR1-209ENST00000455279 RALBP1Q15311 655 aa27.08■■□□□ 1.93
CCHCR1-209ENST00000455279 THUMPD2Q9BTF0 503 aaKnown RBP27.08■■□□□ 1.93
CCHCR1-209ENST00000455279 MIS18AQ9NYP9 233 aa27.08■■□□□ 1.93
CCHCR1-209ENST00000455279 PIP4K2AP48426 406 aaPredicted RBP27.07■■□□□ 1.92
CCHCR1-209ENST00000455279 A1BGP04217 495 aa27.06■■□□□ 1.92
CCHCR1-209ENST00000455279 ZNF784Q8NCA9 323 aaPredicted RBP27.06■■□□□ 1.92
CCHCR1-209ENST00000455279 RTF1Q92541 710 aaKnown RBP27.05■■□□□ 1.92
CCHCR1-209ENST00000455279 FMNL2Q96PY5 1086 aa27.05■■□□□ 1.92
CCHCR1-209ENST00000455279 USP16Q9Y5T5 823 aa27.05■■□□□ 1.92
CCHCR1-209ENST00000455279 PARP3Q9Y6F1 533 aa27.05■■□□□ 1.92
CCHCR1-209ENST00000455279 A0A0G2JLW4 131 aa27.04■■□□□ 1.92
CCHCR1-209ENST00000455279 TM4SF1P30408 202 aa27.04■■□□□ 1.92
CCHCR1-209ENST00000455279 POLRMTO00411 1230 aaKnown RBP27.03■■□□□ 1.92
CCHCR1-209ENST00000455279 EIF5P55010 431 aaKnown RBP27.03■■□□□ 1.92
CCHCR1-209ENST00000455279 NARFQ9UHQ1 456 aa27.03■■□□□ 1.92
CCHCR1-209ENST00000455279 MYBBP1AQ9BQG0 1328 aaKnown RBP27.02■■□□□ 1.92
CCHCR1-209ENST00000455279 DPEP1P16444 411 aa27.02■■□□□ 1.92
CCHCR1-209ENST00000455279 NFIXQ14938 502 aa27.02■■□□□ 1.92
CCHCR1-209ENST00000455279 AFDNP55196 1824 aaKnown RBP27.02■■□□□ 1.92
CCHCR1-209ENST00000455279 ZPR1O75312 459 aa27.01■■□□□ 1.91
CCHCR1-209ENST00000455279 NFE2L2Q16236 605 aa27.01■■□□□ 1.91
CCHCR1-209ENST00000455279 ZNF330Q9Y3S2 320 aaPredicted RBP27.01■■□□□ 1.91
CCHCR1-209ENST00000455279 HTATSF1O43719 755 aaKnown RBP27■■□□□ 1.91
CCHCR1-209ENST00000455279 STARD3NLO95772 234 aa27■■□□□ 1.91
CCHCR1-209ENST00000455279 TBC1D2BQ9UPU7 963 aa26.99■■□□□ 1.91
CCHCR1-209ENST00000455279 BRCA1P38398 1863 aaKnown RBP26.99■■□□□ 1.91
CCHCR1-209ENST00000455279 GRIN3BO60391 1043 aa26.98■■□□□ 1.91
CCHCR1-209ENST00000455279 KCNA3P22001 575 aa26.98■■□□□ 1.91
CCHCR1-209ENST00000455279 KDM3BQ7LBC6 1761 aa26.98■■□□□ 1.91
CCHCR1-209ENST00000455279 TAF7Q15545 349 aaPredicted RBP26.97■■□□□ 1.91
CCHCR1-209ENST00000455279 CCDC146Q8IYE0 955 aa26.97■■□□□ 1.91
CCHCR1-209ENST00000455279 SCN7AQ01118 1682 aa26.97■■□□□ 1.91
CCHCR1-209ENST00000455279 CHRNA5P30532 468 aa26.96■■□□□ 1.91
CCHCR1-209ENST00000455279 BICDL1Q6ZP65 573 aa26.96■■□□□ 1.91
CCHCR1-209ENST00000455279 NRXN2Q9P2S2 1712 aa26.96■■□□□ 1.91
CCHCR1-209ENST00000455279 TGFB2P61812 414 aa26.95■■□□□ 1.9
CCHCR1-209ENST00000455279 TEX13AQ9BXU3 409 aaPredicted RBP26.95■■□□□ 1.9
CCHCR1-209ENST00000455279 PRKRIP1Q9H875 184 aaPredicted RBP26.95■■□□□ 1.9
CCHCR1-209ENST00000455279 RRP7AQ9Y3A4 280 aaKnown RBP26.95■■□□□ 1.9
CCHCR1-209ENST00000455279 CARMIL3Q8ND23 1372 aa26.95■■□□□ 1.9
CCHCR1-209ENST00000455279 TBC1D9BQ66K14 1250 aa26.94■■□□□ 1.9
CCHCR1-209ENST00000455279 MAPK8IP3Q9UPT6 1336 aa26.93■■□□□ 1.9
CCHCR1-209ENST00000455279 NBPF26B4DH59 902 aa26.93■■□□□ 1.9
CCHCR1-209ENST00000455279 IL6STP40189 918 aaPredicted RBP26.93■■□□□ 1.9
CCHCR1-209ENST00000455279 NBPF10Q6P3W6 841 aaKnown RBP26.93■■□□□ 1.9
CCHCR1-209ENST00000455279 NBPF15Q8N660 670 aa26.93■■□□□ 1.9
CCHCR1-209ENST00000455279 BCS1LQ9Y276 419 aa26.93■■□□□ 1.9
CCHCR1-209ENST00000455279 CAMTA2O94983 1202 aa26.92■■□□□ 1.9
CCHCR1-209ENST00000455279 SNRPA1P09661 255 aaKnown RBP26.92■■□□□ 1.9
CCHCR1-209ENST00000455279 SERPINB2P05120 415 aa26.91■■□□□ 1.9
CCHCR1-209ENST00000455279 NEFMP07197 916 aa26.91■■□□□ 1.9
CCHCR1-209ENST00000455279 CCDC24Q8N4L8 307 aa26.91■■□□□ 1.9
CCHCR1-209ENST00000455279 BCORQ6W2J9 1755 aa26.91■■□□□ 1.9
CCHCR1-209ENST00000455279 TMPOP42166 694 aaKnown RBP26.89■■□□□ 1.9
CCHCR1-209ENST00000455279 RIPK4P57078 832 aa26.89■■□□□ 1.9
CCHCR1-209ENST00000455279 LAMB4A4D0S4 1761 aa26.89■■□□□ 1.89
CCHCR1-209ENST00000455279 A0A087WZG4 1122 aa26.88■■□□□ 1.89
CCHCR1-209ENST00000455279 EIF4A1P60842 406 aaKnown RBP26.88■■□□□ 1.89
CCHCR1-209ENST00000455279 ADAMTS8Q9UP79 889 aa26.88■■□□□ 1.89
CCHCR1-209ENST00000455279 ANKRD31Q8N7Z5 1873 aa26.87■■□□□ 1.89
CCHCR1-209ENST00000455279 DZIP3Q86Y13 1208 aaKnown RBP26.87■■□□□ 1.89
CCHCR1-209ENST00000455279 ADCY9O60503 1353 aa26.86■■□□□ 1.89
CCHCR1-209ENST00000455279 NEUROD2Q15784 382 aa26.86■■□□□ 1.89
CCHCR1-209ENST00000455279 CCDC184Q52MB2 194 aa26.86■■□□□ 1.89
CCHCR1-209ENST00000455279 ATP10DQ9P241 1426 aa26.86■■□□□ 1.89
CCHCR1-209ENST00000455279 GIGYF1O75420 1035 aaPredicted RBP26.85■■□□□ 1.89
CCHCR1-209ENST00000455279 PNNQ9H307 717 aaKnown RBP26.84■■□□□ 1.89
CCHCR1-209ENST00000455279 ARFGEF1Q9Y6D6 1849 aa26.83■■□□□ 1.89
CCHCR1-209ENST00000455279 PIM2Q9P1W9 311 aa26.82■■□□□ 1.88
CCHCR1-209ENST00000455279 TRIM35Q9UPQ4 493 aa26.82■■□□□ 1.88
CCHCR1-209ENST00000455279 PRR5LQ6MZQ0 368 aa26.81■■□□□ 1.88
CCHCR1-209ENST00000455279 PNISRQ8TF01 805 aaKnown RBP26.81■■□□□ 1.88
CCHCR1-209ENST00000455279 COL11A2P13942 1736 aaPredicted RBP26.81■■□□□ 1.88
CCHCR1-209ENST00000455279 DLEC1Q9Y238 1755 aa26.8■■□□□ 1.88
CCHCR1-209ENST00000455279 ZEB1P37275 1124 aaPredicted RBP26.8■■□□□ 1.88
CCHCR1-209ENST00000455279 WDR43Q15061 677 aaKnown RBP eCLIP26.8■■□□□ 1.88
CCHCR1-209ENST00000455279 HLFQ16534 295 aa26.8■■□□□ 1.88
CCHCR1-209ENST00000455279 ARHGAP27Q6ZUM4 889 aa26.8■■□□□ 1.88
CCHCR1-209ENST00000455279 NGEFQ8N5V2 710 aa26.8■■□□□ 1.88
CCHCR1-209ENST00000455279 ZNF526Q8TF50 670 aaPredicted RBP26.79■■□□□ 1.88
CCHCR1-209ENST00000455279 RUNDC1Q96C34 613 aa26.79■■□□□ 1.88
CCHCR1-209ENST00000455279 TSPYL4Q9UJ04 414 aa26.79■■□□□ 1.88
CCHCR1-209ENST00000455279 KRT24Q2M2I5 525 aa26.78■■□□□ 1.88
CCHCR1-209ENST00000455279 DALRD3Q5D0E6 543 aaKnown RBP26.78■■□□□ 1.88
CCHCR1-209ENST00000455279 TTLL7Q6ZT98 887 aa26.77■■□□□ 1.88
CCHCR1-209ENST00000455279 C2CD5Q86YS7 1000 aa26.77■■□□□ 1.88
CCHCR1-209ENST00000455279 SENP3-EIF4A1A0A087X0R7 540 aa26.75■■□□□ 1.87
CCHCR1-209ENST00000455279 MYL6BP14649 208 aa26.75■■□□□ 1.87
CCHCR1-209ENST00000455279 NPM2Q86SE8 214 aaKnown RBP26.75■■□□□ 1.87
CCHCR1-209ENST00000455279 ANXA1P04083 346 aa26.74■■□□□ 1.87
CCHCR1-209ENST00000455279 SETDB2Q96T68 719 aa26.74■■□□□ 1.87
CCHCR1-209ENST00000455279 PRELPP51888 382 aa26.73■■□□□ 1.87
CCHCR1-209ENST00000455279 PROSER3Q2NL68 480 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms