RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 CDK12Q9NYV4 1490 aaPredicted RBP23.54■■□□□ 1.36
LMBR1-213ENST00000454132 F13A1P00488 732 aa23.54■■□□□ 1.36
LMBR1-213ENST00000454132 CASTP20810 708 aaKnown RBP23.54■■□□□ 1.36
LMBR1-213ENST00000454132 NECAB1Q8N987 351 aa23.54■■□□□ 1.36
LMBR1-213ENST00000454132 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
LMBR1-213ENST00000454132 PTGS1P23219 599 aa23.53■■□□□ 1.36
LMBR1-213ENST00000454132 ATP8B2P98198 1209 aa23.53■■□□□ 1.36
LMBR1-213ENST00000454132 NAA30Q147X3 362 aaPredicted RBP23.53■■□□□ 1.36
LMBR1-213ENST00000454132 ALKQ9UM73 1620 aa23.53■■□□□ 1.36
LMBR1-213ENST00000454132 MLECQ14165 292 aa23.53■■□□□ 1.36
LMBR1-213ENST00000454132 GJB2P29033 226 aa23.53■■□□□ 1.36
LMBR1-213ENST00000454132 CKAP2LQ8IYA6 745 aa23.53■■□□□ 1.36
LMBR1-213ENST00000454132 KIAA0232Q92628 1395 aa23.52■■□□□ 1.36
LMBR1-213ENST00000454132 LRMPQ12912 555 aa23.52■■□□□ 1.36
LMBR1-213ENST00000454132 KIAA1524Q8TCG1 905 aa23.52■■□□□ 1.36
LMBR1-213ENST00000454132 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
LMBR1-213ENST00000454132 MLH3Q9UHC1 1453 aa23.52■■□□□ 1.36
LMBR1-213ENST00000454132 LUZP1Q86V48 1076 aa23.51■■□□□ 1.35
LMBR1-213ENST00000454132 PLEKHG5O94827 1062 aa23.51■■□□□ 1.35
LMBR1-213ENST00000454132 SPTLC3Q9NUV7 552 aa23.51■■□□□ 1.35
LMBR1-213ENST00000454132 COL9A3Q14050 684 aaPredicted RBP23.5■■□□□ 1.35
LMBR1-213ENST00000454132 ADCK5Q3MIX3 580 aa23.5■■□□□ 1.35
LMBR1-213ENST00000454132 DRC7Q8IY82 874 aa23.5■■□□□ 1.35
LMBR1-213ENST00000454132 C16orf45Q96MC5 204 aaPredicted RBP23.5■■□□□ 1.35
LMBR1-213ENST00000454132 NRBP1Q9UHY1 535 aa23.5■■□□□ 1.35
LMBR1-213ENST00000454132 CCDC61Q9Y6R9 512 aa23.5■■□□□ 1.35
LMBR1-213ENST00000454132 TCEANC2Q96MN5 208 aa23.49■■□□□ 1.35
LMBR1-213ENST00000454132 GTF2F1P35269 517 aaKnown RBP eCLIP23.49■■□□□ 1.352e-7■■■■■ 37.4
LMBR1-213ENST00000454132 LIMCH1Q9UPQ0 1083 aa23.49■■□□□ 1.35
LMBR1-213ENST00000454132 CHAF1AQ13111 956 aaPredicted RBP23.49■■□□□ 1.35
LMBR1-213ENST00000454132 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
LMBR1-213ENST00000454132 FUCA2Q9BTY2 467 aa23.48■■□□□ 1.35
LMBR1-213ENST00000454132 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
LMBR1-213ENST00000454132 ATP7BP35670 1465 aa23.48■■□□□ 1.35
LMBR1-213ENST00000454132 GNAI3P08754 354 aa23.48■■□□□ 1.35
LMBR1-213ENST00000454132 PPP1R42Q7Z4L9 355 aa23.48■■□□□ 1.35
LMBR1-213ENST00000454132 PHAXQ9H814 394 aaKnown RBP23.48■■□□□ 1.35
LMBR1-213ENST00000454132 UBTFL1P0CB47 393 aaPredicted RBP23.47■■□□□ 1.35
LMBR1-213ENST00000454132 JAKMIP1Q96N16 626 aaKnown RBP23.47■■□□□ 1.35
LMBR1-213ENST00000454132 TTC14Q96N46 770 aa23.47■■□□□ 1.35
LMBR1-213ENST00000454132 USP44Q9H0E7 712 aa23.47■■□□□ 1.35
LMBR1-213ENST00000454132 SGSM2O43147 1006 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 PRPF40BQ6NWY9 871 aaKnown RBP23.46■■□□□ 1.35
LMBR1-213ENST00000454132 TMEM87AQ8NBN3 555 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 AATKQ6ZMQ8 1374 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 PTH1RQ03431 593 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 CCDC186Q7Z3E2 898 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 TFIP11Q9UBB9 837 aaKnown RBP23.46■■□□□ 1.35
LMBR1-213ENST00000454132 STAP2Q9UGK3 403 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 CRB1P82279 1406 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 LIG1P18858 919 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 LSG1Q9H089 658 aaKnown RBP23.46■■□□□ 1.35
LMBR1-213ENST00000454132 MTMR6Q9Y217 621 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.46■■□□□ 1.35
LMBR1-213ENST00000454132 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
LMBR1-213ENST00000454132 RAD50Q92878 1312 aa23.45■■□□□ 1.34
LMBR1-213ENST00000454132 LETM1O95202 739 aaPredicted RBP23.45■■□□□ 1.34
LMBR1-213ENST00000454132 EIF2S2P20042 333 aaKnown RBP23.44■■□□□ 1.34
LMBR1-213ENST00000454132 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
LMBR1-213ENST00000454132 SRGAP3O43295 1099 aa23.44■■□□□ 1.34
LMBR1-213ENST00000454132 PI4K2BQ8TCG2 481 aa23.44■■□□□ 1.34
LMBR1-213ENST00000454132 ZNF592Q92610 1267 aa23.44■■□□□ 1.34
LMBR1-213ENST00000454132 RHPN1Q8TCX5 695 aa23.43■■□□□ 1.34
LMBR1-213ENST00000454132 DIAPH3Q9NSV4 1193 aa23.43■■□□□ 1.34
LMBR1-213ENST00000454132 METP08581 1390 aa23.43■■□□□ 1.34
LMBR1-213ENST00000454132 SOS1Q07889 1333 aaPredicted RBP23.43■■□□□ 1.34
LMBR1-213ENST00000454132 ANXA1P04083 346 aa23.42■■□□□ 1.34
LMBR1-213ENST00000454132 UTP14CQ5TAP6 766 aaKnown RBP23.42■■□□□ 1.34
LMBR1-213ENST00000454132 TTC6Q86TZ1 520 aa23.42■■□□□ 1.34
LMBR1-213ENST00000454132 PDRG1Q9NUG6 133 aa23.42■■□□□ 1.34
LMBR1-213ENST00000454132 HYPKQ9NX55 129 aa23.42■■□□□ 1.34
LMBR1-213ENST00000454132 CCDC192P0DO97 292 aa23.42■■□□□ 1.34
LMBR1-213ENST00000454132 OS9Q13438 667 aaPredicted RBP23.42■■□□□ 1.34
LMBR1-213ENST00000454132 LTV1Q96GA3 475 aaPredicted RBP23.42■■□□□ 1.34
LMBR1-213ENST00000454132 NBPF7P0C2Y1 421 aaPredicted RBP23.41■■□□□ 1.34
LMBR1-213ENST00000454132 ME3Q16798 604 aa23.41■■□□□ 1.34
LMBR1-213ENST00000454132 ST3GAL1Q11201 340 aa23.4■■□□□ 1.34
LMBR1-213ENST00000454132 CDC37L1Q7L3B6 337 aa23.4■■□□□ 1.34
LMBR1-213ENST00000454132 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.4■■□□□ 1.34
LMBR1-213ENST00000454132 V9GYY5 206 aaPredicted RBP23.4■■□□□ 1.34
LMBR1-213ENST00000454132 STK3Q13188 491 aa23.4■■□□□ 1.34
LMBR1-213ENST00000454132 CCDC30Q5VVM6 783 aa23.4■■□□□ 1.34
LMBR1-213ENST00000454132 TTC21BQ7Z4L5 1316 aa23.4■■□□□ 1.34
LMBR1-213ENST00000454132 ANO6Q4KMQ2 910 aa23.39■■□□□ 1.34
LMBR1-213ENST00000454132 NUTM2GQ5VZR2 741 aa23.39■■□□□ 1.34
LMBR1-213ENST00000454132 TRIM5Q9C035 493 aa23.39■■□□□ 1.34
LMBR1-213ENST00000454132 ATP6V1DQ9Y5K8 247 aa23.39■■□□□ 1.34
LMBR1-213ENST00000454132 LARP1BQ659C4 914 aaKnown RBP23.39■■□□□ 1.33
LMBR1-213ENST00000454132 MRVI1Q9Y6F6 885 aa23.39■■□□□ 1.33
LMBR1-213ENST00000454132 TYRO3Q06418 890 aa23.39■■□□□ 1.33
LMBR1-213ENST00000454132 CNTROBQ8N137 903 aa23.39■■□□□ 1.33
LMBR1-213ENST00000454132 DACT1Q9NYF0 836 aa23.39■■□□□ 1.33
LMBR1-213ENST00000454132 RIMS1Q86UR5 1692 aaKnown RBP23.39■■□□□ 1.33
LMBR1-213ENST00000454132 SSH2Q76I76 1423 aa23.39■■□□□ 1.33
LMBR1-213ENST00000454132 ACEP12821 1306 aa23.38■■□□□ 1.33
LMBR1-213ENST00000454132 KCNJ4P48050 445 aa23.38■■□□□ 1.33
LMBR1-213ENST00000454132 NCBP1Q09161 790 aaKnown RBP23.38■■□□□ 1.33
LMBR1-213ENST00000454132 A0A087WWV3 80 aa23.37■■□□□ 1.33
LMBR1-213ENST00000454132 GOLGA6L6A8MZA4 724 aa23.37■■□□□ 1.33
LMBR1-213ENST00000454132 NUP62CLQ9H1M0 184 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms