RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 STARD3NLO95772 234 aa39.77■■■■□ 3.96
CCDC117-206ENST00000453543 COL15A1P39059 1388 aa39.75■■■■□ 3.95
CCDC117-206ENST00000453543 GPR162Q16538 588 aa39.75■■■■□ 3.95
CCDC117-206ENST00000453543 CANXP27824 592 aaKnown RBP39.74■■■■□ 3.95
CCDC117-206ENST00000453543 PELP1Q8IZL8 1130 aaKnown RBP39.74■■■■□ 3.95
CCDC117-206ENST00000453543 FKBP8Q14318 412 aa39.73■■■■□ 3.95
CCDC117-206ENST00000453543 TEX13AQ9BXU3 409 aaPredicted RBP39.73■■■■□ 3.95
CCDC117-206ENST00000453543 TAF7Q15545 349 aaPredicted RBP39.71■■■■□ 3.95
CCDC117-206ENST00000453543 THUMPD2Q9BTF0 503 aaKnown RBP39.71■■■■□ 3.95
CCDC117-206ENST00000453543 YY1P25490 414 aa39.69■■■■□ 3.94
CCDC117-206ENST00000453543 USPL1Q5W0Q7 1092 aa39.69■■■■□ 3.94
CCDC117-206ENST00000453543 MIS18AQ9NYP9 233 aa39.69■■■■□ 3.94
CCDC117-206ENST00000453543 ZNF316A6NFI3 1004 aaPredicted RBP39.68■■■■□ 3.94
CCDC117-206ENST00000453543 ZPR1O75312 459 aa39.68■■■■□ 3.94
CCDC117-206ENST00000453543 PRAMEF22A3QJZ6 481 aa39.67■■■■□ 3.94
CCDC117-206ENST00000453543 WDR43Q15061 677 aaKnown RBP eCLIP39.67■■■■□ 3.94
CCDC117-206ENST00000453543 KIF13BQ9NQT8 1826 aa39.67■■■■□ 3.94
CCDC117-206ENST00000453543 YBX3P16989 372 aaKnown RBP eCLIP39.66■■■■□ 3.94
CCDC117-206ENST00000453543 EIF5P55010 431 aaKnown RBP39.66■■■■□ 3.94
CCDC117-206ENST00000453543 CCDC146Q8IYE0 955 aa39.66■■■■□ 3.94
CCDC117-206ENST00000453543 NARFQ9UHQ1 456 aa39.66■■■■□ 3.94
CCDC117-206ENST00000453543 PARP3Q9Y6F1 533 aa39.66■■■■□ 3.94
CCDC117-206ENST00000453543 KDM3BQ7LBC6 1761 aa39.65■■■■□ 3.94
CCDC117-206ENST00000453543 A1BGP04217 495 aa39.65■■■■□ 3.94
CCDC117-206ENST00000453543 C10orf71Q711Q0 1435 aa39.65■■■■□ 3.94
CCDC117-206ENST00000453543 DDR1Q08345 913 aa39.64■■■■□ 3.94
CCDC117-206ENST00000453543 USP16Q9Y5T5 823 aa39.64■■■■□ 3.94
CCDC117-206ENST00000453543 SNRPA1P09661 255 aaKnown RBP39.62■■■■□ 3.93
CCDC117-206ENST00000453543 TMPOP42166 694 aaKnown RBP39.62■■■■□ 3.93
CCDC117-206ENST00000453543 RIPK4P57078 832 aa39.62■■■■□ 3.93
CCDC117-206ENST00000453543 KIAA1551Q9HCM1 1747 aa39.62■■■■□ 3.93
CCDC117-206ENST00000453543 BCL2L12Q9HB09 334 aa39.61■■■■□ 3.93
CCDC117-206ENST00000453543 ADAMTS8Q9UP79 889 aa39.61■■■■□ 3.93
CCDC117-206ENST00000453543 CHD4Q14839 1912 aa39.6■■■■□ 3.93
CCDC117-206ENST00000453543 ZNF330Q9Y3S2 320 aaPredicted RBP39.6■■■■□ 3.93
CCDC117-206ENST00000453543 TM4SF1P30408 202 aa39.59■■■■□ 3.93
CCDC117-206ENST00000453543 PNISRQ8TF01 805 aaKnown RBP39.59■■■■□ 3.93
CCDC117-206ENST00000453543 RRP7AQ9Y3A4 280 aaKnown RBP39.59■■■■□ 3.93
CCDC117-206ENST00000453543 PXDNLA1KZ92 1463 aa39.59■■■■□ 3.93
CCDC117-206ENST00000453543 IL6STP40189 918 aaPredicted RBP39.58■■■■□ 3.93
CCDC117-206ENST00000453543 WWC3Q9ULE0 1092 aa39.58■■■■□ 3.93
CCDC117-206ENST00000453543 PIP4K2AP48426 406 aaPredicted RBP39.57■■■■□ 3.93
CCDC117-206ENST00000453543 N4BP2Q86UW6 1770 aaPredicted RBP39.56■■■■□ 3.92
CCDC117-206ENST00000453543 A0A087WZG4 1122 aa39.56■■■■□ 3.92
CCDC117-206ENST00000453543 POLRMTO00411 1230 aaKnown RBP39.56■■■■□ 3.92
CCDC117-206ENST00000453543 RUNDC1Q96C34 613 aa39.56■■■■□ 3.92
CCDC117-206ENST00000453543 SCN7AQ01118 1682 aa39.56■■■■□ 3.92
CCDC117-206ENST00000453543 NFIXQ14938 502 aa39.55■■■■□ 3.92
CCDC117-206ENST00000453543 TBC1D2BQ9UPU7 963 aa39.54■■■■□ 3.92
CCDC117-206ENST00000453543 LAMB4A4D0S4 1761 aa39.54■■■■□ 3.92
CCDC117-206ENST00000453543 NEUROD2Q15784 382 aa39.53■■■■□ 3.92
CCDC117-206ENST00000453543 GRIN3BO60391 1043 aa39.51■■■■□ 3.92
CCDC117-206ENST00000453543 EIF4A1P60842 406 aaKnown RBP39.51■■■■□ 3.92
CCDC117-206ENST00000453543 TGFB2P61812 414 aa39.51■■■■□ 3.92
CCDC117-206ENST00000453543 LMOD3Q0VAK6 560 aa39.51■■■■□ 3.92
CCDC117-206ENST00000453543 AFDNP55196 1824 aaKnown RBP39.5■■■■□ 3.91
CCDC117-206ENST00000453543 A0A0G2JLW4 131 aa39.49■■■■□ 3.91
CCDC117-206ENST00000453543 NBPF26B4DH59 902 aa39.47■■■■□ 3.91
CCDC117-206ENST00000453543 GIGYF1O75420 1035 aaPredicted RBP39.47■■■■□ 3.91
CCDC117-206ENST00000453543 NBPF10Q6P3W6 841 aaKnown RBP39.47■■■■□ 3.91
CCDC117-206ENST00000453543 NPM2Q86SE8 214 aaKnown RBP39.47■■■■□ 3.91
CCDC117-206ENST00000453543 NBPF15Q8N660 670 aa39.47■■■■□ 3.91
CCDC117-206ENST00000453543 TSPYL4Q9UJ04 414 aa39.47■■■■□ 3.91
CCDC117-206ENST00000453543 NRXN2Q9P2S2 1712 aa39.47■■■■□ 3.91
CCDC117-206ENST00000453543 BCORQ6W2J9 1755 aa39.46■■■■□ 3.91
CCDC117-206ENST00000453543 DPEP1P16444 411 aa39.46■■■■□ 3.91
CCDC117-206ENST00000453543 CCDC184Q52MB2 194 aa39.46■■■■□ 3.91
CCDC117-206ENST00000453543 BICDL1Q6ZP65 573 aa39.46■■■■□ 3.91
CCDC117-206ENST00000453543 CAMTA2O94983 1202 aa39.45■■■■□ 3.91
CCDC117-206ENST00000453543 DZIP3Q86Y13 1208 aaKnown RBP39.45■■■■□ 3.91
CCDC117-206ENST00000453543 TRIM35Q9UPQ4 493 aa39.45■■■■□ 3.91
CCDC117-206ENST00000453543 TBC1D9BQ66K14 1250 aa39.44■■■■□ 3.9
CCDC117-206ENST00000453543 SERPINB2P05120 415 aa39.42■■■■□ 3.9
CCDC117-206ENST00000453543 BRCA1P38398 1863 aaKnown RBP39.42■■■■□ 3.9
CCDC117-206ENST00000453543 KCNA3P22001 575 aa39.39■■■■□ 3.9
CCDC117-206ENST00000453543 BABAM1Q9NWV8 329 aa39.37■■■■□ 3.89
CCDC117-206ENST00000453543 CHRNA5P30532 468 aa39.36■■■■□ 3.89
CCDC117-206ENST00000453543 BCS1LQ9Y276 419 aa39.36■■■■□ 3.89
CCDC117-206ENST00000453543 ANP32CO43423 234 aa39.35■■■■□ 3.89
CCDC117-206ENST00000453543 CARMIL3Q8ND23 1372 aa39.34■■■■□ 3.89
CCDC117-206ENST00000453543 APAF1O14727 1248 aa39.34■■■■□ 3.89
CCDC117-206ENST00000453543 ZNF784Q8NCA9 323 aaPredicted RBP39.33■■■■□ 3.89
CCDC117-206ENST00000453543 LAS1LQ9Y4W2 734 aaKnown RBP39.31■■■■□ 3.88
CCDC117-206ENST00000453543 CHL1O00533 1208 aa39.3■■■■□ 3.88
CCDC117-206ENST00000453543 SETDB2Q96T68 719 aa39.3■■■■□ 3.88
CCDC117-206ENST00000453543 NGEFQ8N5V2 710 aa39.29■■■■□ 3.88
CCDC117-206ENST00000453543 PIM2Q9P1W9 311 aa39.29■■■■□ 3.88
CCDC117-206ENST00000453543 MYL6BP14649 208 aa39.27■■■■□ 3.88
CCDC117-206ENST00000453543 CLEC4GQ6UXB4 293 aa39.27■■■■□ 3.88
CCDC117-206ENST00000453543 ANKRD31Q8N7Z5 1873 aa39.27■■■■□ 3.88
CCDC117-206ENST00000453543 ZNF652Q9Y2D9 606 aa39.27■■■■□ 3.88
CCDC117-206ENST00000453543 PRR5LQ6MZQ0 368 aa39.26■■■■□ 3.88
CCDC117-206ENST00000453543 CCDC24Q8N4L8 307 aa39.26■■■■□ 3.88
CCDC117-206ENST00000453543 ARFGEF1Q9Y6D6 1849 aa39.26■■■■□ 3.87
CCDC117-206ENST00000453543 KRT24Q2M2I5 525 aa39.25■■■■□ 3.87
CCDC117-206ENST00000453543 MRS2Q9HD23 443 aa39.25■■■■□ 3.87
CCDC117-206ENST00000453543 DLEC1Q9Y238 1755 aa39.24■■■■□ 3.87
CCDC117-206ENST00000453543 EIF2S2P20042 333 aaKnown RBP39.24■■■■□ 3.87
CCDC117-206ENST00000453543 HLFQ16534 295 aa39.24■■■■□ 3.87
CCDC117-206ENST00000453543 ERBB4Q15303 1308 aa39.23■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms