RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CNTNAP3Q9BZ76 1288 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 IQSEC3Q9UPP2 1182 aaPredicted RBP7.73□□□□□ -1.17
LINC00393-202ENST00000452852 USP3Q9Y6I4 520 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 EPHA4P54764 986 aa7.72□□□□□ -1.17
LINC00393-202ENST00000452852 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
LINC00393-202ENST00000452852 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
LINC00393-202ENST00000452852 TNS4Q8IZW8 715 aa7.72□□□□□ -1.17
LINC00393-202ENST00000452852 NIFKQ9BYG3 293 aaKnown RBP7.72□□□□□ -1.17
LINC00393-202ENST00000452852 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 A0A1B0GTH6 734 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 F11P03951 625 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 PLA2G4AP47712 749 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 PTK7Q13308 1070 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 DBN1Q16643 649 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 CDCA8Q53HL2 280 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 ZNF295-AS1Q8N0V1 137 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 GPAMQ9HCL2 828 aa7.71□□□□□ -1.18
LINC00393-202ENST00000452852 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L21D6R901 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 TBCELQ5QJ74 424 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 CABP1Q9NZU7 370 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
LINC00393-202ENST00000452852 NACADO15069 1562 aa7.7□□□□□ -1.18
LINC00393-202ENST00000452852 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 H7C1W4 665 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 M0R2N6 131 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 MSX1P28360 303 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 DPYDQ12882 1025 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
LINC00393-202ENST00000452852 TSEN2Q8NCE0 465 aaKnown RBP7.69□□□□□ -1.18
LINC00393-202ENST00000452852 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
LINC00393-202ENST00000452852 SEC13P55735 322 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 ZNF385CQ66K41 422 aaPredicted RBP7.68□□□□□ -1.18
LINC00393-202ENST00000452852 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 ANKMY2Q8IV38 441 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 CCDC82Q8N4S0 544 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 GALNT6Q8NCL4 622 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 AIDAQ96BJ3 306 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
LINC00393-202ENST00000452852 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 COL25A1Q9BXS0 654 aaPredicted RBP7.68□□□□□ -1.18
LINC00393-202ENST00000452852 SERPINA10Q9UK55 444 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 PARP3Q9Y6F1 533 aa7.68□□□□□ -1.18
LINC00393-202ENST00000452852 THBS1P07996 1170 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 KRT76Q01546 638 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 ZDHHC1Q8WTX9 485 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 GTPBP3Q969Y2 492 aaKnown RBP7.67□□□□□ -1.18
LINC00393-202ENST00000452852 NUCKS1Q9H1E3 243 aaKnown RBP7.67□□□□□ -1.18
LINC00393-202ENST00000452852 TSPAN10Q9H1Z9 355 aaPredicted RBP7.67□□□□□ -1.18
LINC00393-202ENST00000452852 RUBCNLQ9H714 662 aa7.67□□□□□ -1.18
LINC00393-202ENST00000452852 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.66□□□□□ -1.18
LINC00393-202ENST00000452852 GPR25O00155 361 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 NOS2P35228 1153 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 Q8N3U1 123 aa7.66□□□□□ -1.18
LINC00393-202ENST00000452852 LGR5O75473 907 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 CSB-PGBD3P0DP91 1061 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 ATP4AP20648 1035 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 SRPK2P78362 688 aaKnown RBP7.65□□□□□ -1.18
LINC00393-202ENST00000452852 TEAD4Q15561 434 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 PGBD3Q8N328 593 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 L3MBTL2Q969R5 705 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 HINFPQ9BQA5 517 aa7.65□□□□□ -1.18
LINC00393-202ENST00000452852 TXLNAP40222 546 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 NBPF1Q3BBV0 1214 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 SH3PXD2AQ5TCZ1 1133 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 C1orf216Q8TAB5 229 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 SPOCK3Q9BQ16 436 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
LINC00393-202ENST00000452852 ATAD2Q6PL18 1390 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 SERTM1A2A2V5 107 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 K7ELQ4 463 aaPredicted RBP7.63□□□□□ -1.19
LINC00393-202ENST00000452852 C21orf2O43822 256 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 PSMA6P60900 246 aaKnown RBP7.63□□□□□ -1.19
LINC00393-202ENST00000452852 GAS6Q14393 721 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 EFHC2Q5JST6 749 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 FAM200AQ8TCP9 573 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 SCG3Q8WXD2 468 aaKnown RBP7.63□□□□□ -1.19
LINC00393-202ENST00000452852 CRISPLD1Q9H336 500 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 ZDHHC3Q9NYG2 299 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 UNC13AQ9UPW8 1703 aa7.63□□□□□ -1.19
LINC00393-202ENST00000452852 PPP1R12BO60237 982 aaPredicted RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 PDIA4P13667 645 aaKnown RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 TATP17735 454 aaPredicted RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 UBAP2LQ14157 1087 aaKnown RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 LBRQ14739 615 aaKnown RBP7.62□□□□□ -1.19
LINC00393-202ENST00000452852 PLA2G4EQ3MJ16 856 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms