RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 GLMNQ92990 594 aa7.96□□□□□ -1.14
USP40-209ENST00000452724 ACDQ96AP0 544 aa7.96□□□□□ -1.14
USP40-209ENST00000452724 OXCT2Q9BYC2 517 aaPredicted RBP7.96□□□□□ -1.14
USP40-209ENST00000452724 ZNF358Q9NW07 568 aa7.96□□□□□ -1.14
USP40-209ENST00000452724 GDF11O95390 407 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 THBS1P07996 1170 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 BMP4P12644 408 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 RASSF7Q02833 373 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 KANK3Q6NY19 840 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP40-209ENST00000452724 ADAMTS19Q8TE59 1207 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 GDF2Q9UK05 429 aaPredicted RBP7.95□□□□□ -1.14
USP40-209ENST00000452724 PCDHGC4Q9Y5F7 938 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
USP40-209ENST00000452724 PHF20L1A8MW92 1017 aa7.94□□□□□ -1.14
USP40-209ENST00000452724 ATP4AP20648 1035 aa7.94□□□□□ -1.14
USP40-209ENST00000452724 FGFR3P22607 806 aa7.94□□□□□ -1.14
USP40-209ENST00000452724 ABHD17AQ96GS6 310 aa7.94□□□□□ -1.14
USP40-209ENST00000452724 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
USP40-209ENST00000452724 SCHIP1Q9P0W5 487 aaPredicted RBP7.94□□□□□ -1.14
USP40-209ENST00000452724 IQSEC3Q9UPP2 1182 aaPredicted RBP7.94□□□□□ -1.14
USP40-209ENST00000452724 OIP5O43482 229 aa7.93□□□□□ -1.14
USP40-209ENST00000452724 IRS1P35568 1242 aa7.93□□□□□ -1.14
USP40-209ENST00000452724 UBAP2LQ14157 1087 aaKnown RBP7.93□□□□□ -1.14
USP40-209ENST00000452724 BEND7Q8N7W2 519 aaPredicted RBP7.93□□□□□ -1.14
USP40-209ENST00000452724 GOLGA6L1Q8N7Z2 621 aa7.93□□□□□ -1.14
USP40-209ENST00000452724 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
USP40-209ENST00000452724 KLRG1Q96E93 195 aa7.93□□□□□ -1.14
USP40-209ENST00000452724 C1orf115Q9H7X2 142 aa7.93□□□□□ -1.14
USP40-209ENST00000452724 DNAAF2Q9NVR5 837 aaKnown RBP7.93□□□□□ -1.14
USP40-209ENST00000452724 CHMP3Q9Y3E7 222 aa7.93□□□□□ -1.14
USP40-209ENST00000452724 A0A1W2PNR3 127 aa7.92□□□□□ -1.14
USP40-209ENST00000452724 PALM3A6NDB9 673 aaPredicted RBP7.92□□□□□ -1.14
USP40-209ENST00000452724 ATXN7O15265 892 aaPredicted RBP7.92□□□□□ -1.14
USP40-209ENST00000452724 BNIP3LO60238 219 aa7.92□□□□□ -1.14
USP40-209ENST00000452724 CCDC102BQ68D86 513 aa7.92□□□□□ -1.14
USP40-209ENST00000452724 BICDL1Q6ZP65 573 aa7.92□□□□□ -1.14
USP40-209ENST00000452724 LARGE2Q8N3Y3 721 aa7.92□□□□□ -1.14
USP40-209ENST00000452724 UCN2Q96RP3 112 aa7.92□□□□□ -1.14
USP40-209ENST00000452724 ZCCHC2Q9C0B9 1178 aaKnown RBP7.92□□□□□ -1.14
USP40-209ENST00000452724 MKRN1Q9UHC7 482 aaKnown RBP7.92□□□□□ -1.14
USP40-209ENST00000452724 SLC9A9Q8IVB4 645 aa7.91□□□□□ -1.14
USP40-209ENST00000452724 ZNF295-AS1Q8N0V1 137 aa7.91□□□□□ -1.14
USP40-209ENST00000452724 OGFOD1Q8N543 542 aa7.91□□□□□ -1.14
USP40-209ENST00000452724 NDFIP2Q9NV92 336 aa7.91□□□□□ -1.14
USP40-209ENST00000452724 ZNF232Q9UNY5 417 aa7.91□□□□□ -1.14
USP40-209ENST00000452724 GSK3AP49840 483 aa7.9□□□□□ -1.14
USP40-209ENST00000452724 TEAD4Q15561 434 aa7.9□□□□□ -1.14
USP40-209ENST00000452724 L3MBTL2Q969R5 705 aa7.9□□□□□ -1.14
USP40-209ENST00000452724 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
USP40-209ENST00000452724 PARP3Q9Y6F1 533 aa7.9□□□□□ -1.14
USP40-209ENST00000452724 USP3Q9Y6I4 520 aa7.9□□□□□ -1.14
USP40-209ENST00000452724 M0R2N6 131 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 NOS2P35228 1153 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 CLDN10P78369 228 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 FOXK2Q01167 660 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 TNS4Q8IZW8 715 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 KCTD17Q8N5Z5 321 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 GALNT6Q8NCL4 622 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 ZIC5Q96T25 663 aa7.89□□□□□ -1.15
USP40-209ENST00000452724 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
USP40-209ENST00000452724 DNMT3AQ9Y6K1 912 aaPredicted RBP7.89□□□□□ -1.15
USP40-209ENST00000452724 SERTM1A2A2V5 107 aa7.88□□□□□ -1.15
USP40-209ENST00000452724 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
USP40-209ENST00000452724 KHNYNO15037 678 aaKnown RBP7.88□□□□□ -1.15
USP40-209ENST00000452724 ZBTB7BO15156 539 aaPredicted RBP7.88□□□□□ -1.15
USP40-209ENST00000452724 ARAFP10398 606 aa7.88□□□□□ -1.15
USP40-209ENST00000452724 EPHA4P54764 986 aa7.88□□□□□ -1.15
USP40-209ENST00000452724 CTBSQ01459 385 aa7.88□□□□□ -1.15
USP40-209ENST00000452724 SIX5Q8N196 739 aa7.88□□□□□ -1.15
USP40-209ENST00000452724 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
USP40-209ENST00000452724 CCDC97Q96F63 343 aaPredicted RBP7.88□□□□□ -1.15
USP40-209ENST00000452724 TFIP11Q9UBB9 837 aaKnown RBP7.88□□□□□ -1.15
USP40-209ENST00000452724 PIK3R2O00459 728 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 FAM157BP0CG42 384 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 MAPTP10636 758 aaKnown RBP7.87□□□□□ -1.15
USP40-209ENST00000452724 RASA1P20936 1047 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 PSMA6P60900 246 aaKnown RBP7.87□□□□□ -1.15
USP40-209ENST00000452724 TNP2Q05952 138 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 FAM182BQ5T319 152 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 SAMD5Q5TGI4 173 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 LARP1Q6PKG0 1096 aaKnown RBP7.87□□□□□ -1.15
USP40-209ENST00000452724 SLCO4C1Q6ZQN7 724 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 EDARADDQ8WWZ3 215 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 ZNF594Q96JF6 807 aaPredicted RBP7.87□□□□□ -1.15
USP40-209ENST00000452724 KIAA1024Q9UPX6 916 aa7.87□□□□□ -1.15
USP40-209ENST00000452724 C2CD2LO14523 706 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 AMPD1P23109 780 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 TXLNAP40222 546 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 LAMC2Q13753 1193 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 ZDHHC1Q8WTX9 485 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 RRAGCQ9HB90 399 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 AVENQ9NQS1 362 aaPredicted RBP7.86□□□□□ -1.15
USP40-209ENST00000452724 GGA1Q9UJY5 639 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 SERPINA10Q9UK55 444 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 MKL2Q9ULH7 1088 aa7.86□□□□□ -1.15
USP40-209ENST00000452724 MAFBQ9Y5Q3 323 aaPredicted RBP7.86□□□□□ -1.15
USP40-209ENST00000452724 CNTNAP5Q8WYK1 1306 aa7.85□□□□□ -1.15
USP40-209ENST00000452724 ADH6P28332 368 aa7.85□□□□□ -1.15
USP40-209ENST00000452724 TBCELQ5QJ74 424 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms