RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 METTL14Q9HCE5 456 aaKnown RBP6.08□□□□□ -1.44
HMGB3P21-201ENST00000452483 ANKRD33BA6NCL7 494 aa6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 USP17L5A8MUK1 530 aa6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 INSM1Q01101 510 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 SETQ01105 290 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 HSP90AB4PQ58FF6 505 aa6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 CCDC181Q5TID7 509 aa6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 LYSMD3Q7Z3D4 306 aa6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 TFIP11Q9UBB9 837 aaKnown RBP6.07□□□□□ -1.44
HMGB3P21-201ENST00000452483 PPFIA3O75145 1194 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 IL2RAP01589 272 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 ARID4AP29374 1257 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 IGBP1P78318 339 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 NCOA4Q13772 614 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 TSNAXIP1Q2TAA8 658 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 EML3Q32P44 896 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 SLC27A3Q5K4L6 730 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 PRICKLE2Q7Z3G6 844 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 CCDC155Q8N6L0 562 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 IRF7Q92985 503 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 CNKSR1Q969H4 720 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 DNAJC2Q99543 621 aaKnown RBP6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 ETNK1Q9HBU6 452 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 SLC52A1Q9NWF4 448 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 BIN2Q9UBW5 565 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 SBNO2Q9Y2G9 1366 aa6.06□□□□□ -1.44
HMGB3P21-201ENST00000452483 ERBB4Q15303 1308 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 hCG_2014768A0A024R1R8 64 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 SENP3-EIF4A1A0A087X0R7 540 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 SLC35F4A4IF30 521 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 SOWAHDA6NJG2 315 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 STAU1O95793 577 aaKnown RBP6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 RECKO95980 971 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 VSIG8P0DPA2 414 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 NPAS4Q8IUM7 802 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 MORC4Q8TE76 937 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 ESYT1Q9BSJ8 1104 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 TANGO6Q9C0B7 1094 aa6.05□□□□□ -1.44
HMGB3P21-201ENST00000452483 USP17L3A6NCW0 530 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 USP17L4A6NCW7 530 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 CENPBP07199 599 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 RHOQP17081 205 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 SCNN1DP51172 638 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 SUZ12Q15022 739 aaKnown RBP6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 USP17L2Q6R6M4 530 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 TBC1D9Q6ZT07 1266 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 USP17L1Q7RTZ2 530 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 DEPDC4Q8N2C3 294 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 PLCD4Q9BRC7 762 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 GRIP2Q9C0E4 1043 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 LNPKQ9C0E8 428 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 NOD1Q9Y239 953 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 HRH3Q9Y5N1 445 aa6.04□□□□□ -1.44
HMGB3P21-201ENST00000452483 TLDC2A0PJX2 215 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 HMGB1P1B2RPK0 211 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 ATP9BO43861 1147 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 LZTS3O60299 673 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 PTMSP20962 102 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 IBSPP21815 317 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 ITGA6P23229 1130 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 GDF10P55107 478 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 ANAPC15P60006 121 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 GTF2IP78347 998 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 PLEKHM2Q8IWE5 1019 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 XAGE2Q96GT9 111 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 KLHL42Q9P2K6 505 aa6.03□□□□□ -1.44
HMGB3P21-201ENST00000452483 SPATA31C2B4DYI2 1134 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 WASLO00401 505 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 MAFGO15525 162 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 WIPF1O43516 503 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 PEX14O75381 377 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 GMPRP36959 345 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 CENPCQ03188 943 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 TLR1Q15399 786 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 PTPROQ16827 1216 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 SDE2Q6IQ49 451 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 PHLDB3Q6NSJ2 640 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 NBPF10Q6P3W6 841 aaKnown RBP6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 NBPF15Q8N660 670 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 GPATCH3Q96I76 525 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 CCDC136Q96JN2 1154 aa6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 ZSCAN10Q96SZ4 725 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 FHDC1Q9C0D6 1143 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 CUEDC1Q9NWM3 386 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 MAFBQ9Y5Q3 323 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P21-201ENST00000452483 INHAP05111 366 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 PSME1Q06323 249 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 POU4F2Q12837 409 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 TMEM164Q5U3C3 297 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 TAS1R3Q7RTX0 852 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 LARGE2Q8N3Y3 721 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 VTI1AQ96AJ9 217 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 MAGEC2Q9UBF1 373 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 PCDHGA11Q9Y5H2 935 aa6.01□□□□□ -1.45
HMGB3P21-201ENST00000452483 CDC14CA4D256 554 aa6□□□□□ -1.45
HMGB3P21-201ENST00000452483 TMEM229AB2RXF0 380 aa6□□□□□ -1.45
HMGB3P21-201ENST00000452483 MAP4K4O95819 1239 aaPredicted RBP6□□□□□ -1.45
HMGB3P21-201ENST00000452483 GTF2E1P29083 439 aaPredicted RBP6□□□□□ -1.45
HMGB3P21-201ENST00000452483 FGD1P98174 961 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms