RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 MAPK8IP3Q9UPT6 1336 aa23.79■■□□□ 1.4
CTNS-204ENST00000452111 YBX3P16989 372 aaKnown RBP eCLIP23.78■■□□□ 1.4
CTNS-204ENST00000452111 FKBP8Q14318 412 aa23.78■■□□□ 1.4
CTNS-204ENST00000452111 COL15A1P39059 1388 aa23.78■■□□□ 1.4
CTNS-204ENST00000452111 ZPR1O75312 459 aa23.77■■□□□ 1.4
CTNS-204ENST00000452111 PNNQ9H307 717 aaKnown RBP23.77■■□□□ 1.4
CTNS-204ENST00000452111 WWC3Q9ULE0 1092 aa23.77■■□□□ 1.4
CTNS-204ENST00000452111 PARP3Q9Y6F1 533 aa23.77■■□□□ 1.4
CTNS-204ENST00000452111 NFE2L2Q16236 605 aa23.76■■□□□ 1.39
CTNS-204ENST00000452111 USPL1Q5W0Q7 1092 aa23.76■■□□□ 1.39
CTNS-204ENST00000452111 TEX13AQ9BXU3 409 aaPredicted RBP23.75■■□□□ 1.39
CTNS-204ENST00000452111 NARFQ9UHQ1 456 aa23.73■■□□□ 1.39
CTNS-204ENST00000452111 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
CTNS-204ENST00000452111 DDR1Q08345 913 aa23.72■■□□□ 1.39
CTNS-204ENST00000452111 TAF7Q15545 349 aaPredicted RBP23.72■■□□□ 1.39
CTNS-204ENST00000452111 THUMPD2Q9BTF0 503 aaKnown RBP23.72■■□□□ 1.39
CTNS-204ENST00000452111 PRKRIP1Q9H875 184 aaPredicted RBP23.72■■□□□ 1.39
CTNS-204ENST00000452111 MIS18AQ9NYP9 233 aa23.72■■□□□ 1.39
CTNS-204ENST00000452111 C10orf71Q711Q0 1435 aa23.72■■□□□ 1.39
CTNS-204ENST00000452111 GRIN3BO60391 1043 aa23.71■■□□□ 1.39
CTNS-204ENST00000452111 EIF5P55010 431 aaKnown RBP23.71■■□□□ 1.39
CTNS-204ENST00000452111 PRAMEF22A3QJZ6 481 aa23.7■■□□□ 1.38
CTNS-204ENST00000452111 A1BGP04217 495 aa23.7■■□□□ 1.38
CTNS-204ENST00000452111 PXDNLA1KZ92 1463 aa23.69■■□□□ 1.38
CTNS-204ENST00000452111 SNRPA1P09661 255 aaKnown RBP23.69■■□□□ 1.38
CTNS-204ENST00000452111 WDR43Q15061 677 aaKnown RBP eCLIP23.69■■□□□ 1.38
CTNS-204ENST00000452111 USP16Q9Y5T5 823 aa23.69■■□□□ 1.38
CTNS-204ENST00000452111 A0A087WZG4 1122 aa23.68■■□□□ 1.38
CTNS-204ENST00000452111 POLRMTO00411 1230 aaKnown RBP23.68■■□□□ 1.38
CTNS-204ENST00000452111 CCDC146Q8IYE0 955 aa23.68■■□□□ 1.38
CTNS-204ENST00000452111 BCL2L12Q9HB09 334 aa23.68■■□□□ 1.38
CTNS-204ENST00000452111 TM4SF1P30408 202 aa23.67■■□□□ 1.38
CTNS-204ENST00000452111 IL6STP40189 918 aaPredicted RBP23.67■■□□□ 1.38
CTNS-204ENST00000452111 PIP4K2AP48426 406 aaPredicted RBP23.67■■□□□ 1.38
CTNS-204ENST00000452111 TGFB2P61812 414 aa23.67■■□□□ 1.38
CTNS-204ENST00000452111 NFIXQ14938 502 aa23.67■■□□□ 1.38
CTNS-204ENST00000452111 A0A0G2JLW4 131 aa23.66■■□□□ 1.38
CTNS-204ENST00000452111 RIPK4P57078 832 aa23.66■■□□□ 1.38
CTNS-204ENST00000452111 NPM2Q86SE8 214 aaKnown RBP23.66■■□□□ 1.38
CTNS-204ENST00000452111 PNISRQ8TF01 805 aaKnown RBP23.66■■□□□ 1.38
CTNS-204ENST00000452111 TBC1D2BQ9UPU7 963 aa23.65■■□□□ 1.38
CTNS-204ENST00000452111 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
CTNS-204ENST00000452111 DPEP1P16444 411 aa23.64■■□□□ 1.37
CTNS-204ENST00000452111 TMPOP42166 694 aaKnown RBP23.64■■□□□ 1.37
CTNS-204ENST00000452111 RRP7AQ9Y3A4 280 aaKnown RBP23.64■■□□□ 1.37
CTNS-204ENST00000452111 BICDL1Q6ZP65 573 aa23.63■■□□□ 1.37
CTNS-204ENST00000452111 ZNF784Q8NCA9 323 aaPredicted RBP23.63■■□□□ 1.37
CTNS-204ENST00000452111 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
CTNS-204ENST00000452111 ADAMTS8Q9UP79 889 aa23.62■■□□□ 1.37
CTNS-204ENST00000452111 NEUROD2Q15784 382 aa23.61■■□□□ 1.37
CTNS-204ENST00000452111 BCS1LQ9Y276 419 aa23.61■■□□□ 1.37
CTNS-204ENST00000452111 CHD4Q14839 1912 aa23.61■■□□□ 1.37
CTNS-204ENST00000452111 KIAA1551Q9HCM1 1747 aa23.6■■□□□ 1.37
CTNS-204ENST00000452111 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
CTNS-204ENST00000452111 SERPINB2P05120 415 aa23.6■■□□□ 1.37
CTNS-204ENST00000452111 LMOD3Q0VAK6 560 aa23.6■■□□□ 1.37
CTNS-204ENST00000452111 TBC1D9BQ66K14 1250 aa23.6■■□□□ 1.37
CTNS-204ENST00000452111 DZIP3Q86Y13 1208 aaKnown RBP23.6■■□□□ 1.37
CTNS-204ENST00000452111 RUNDC1Q96C34 613 aa23.6■■□□□ 1.37
CTNS-204ENST00000452111 CAMTA2O94983 1202 aa23.59■■□□□ 1.37
CTNS-204ENST00000452111 EIF4A1P60842 406 aaKnown RBP23.59■■□□□ 1.37
CTNS-204ENST00000452111 TSPYL4Q9UJ04 414 aa23.59■■□□□ 1.37
CTNS-204ENST00000452111 N4BP2Q86UW6 1770 aaPredicted RBP23.59■■□□□ 1.37
CTNS-204ENST00000452111 NBPF26B4DH59 902 aa23.58■■□□□ 1.37
CTNS-204ENST00000452111 GIGYF1O75420 1035 aaPredicted RBP23.58■■□□□ 1.37
CTNS-204ENST00000452111 NBPF10Q6P3W6 841 aaKnown RBP23.58■■□□□ 1.37
CTNS-204ENST00000452111 NBPF15Q8N660 670 aa23.58■■□□□ 1.37
CTNS-204ENST00000452111 SCN7AQ01118 1682 aa23.57■■□□□ 1.36
CTNS-204ENST00000452111 KCNA3P22001 575 aa23.57■■□□□ 1.36
CTNS-204ENST00000452111 CHRNA5P30532 468 aa23.57■■□□□ 1.36
CTNS-204ENST00000452111 KDM3BQ7LBC6 1761 aa23.57■■□□□ 1.36
CTNS-204ENST00000452111 PIM2Q9P1W9 311 aa23.55■■□□□ 1.36
CTNS-204ENST00000452111 CARMIL3Q8ND23 1372 aa23.53■■□□□ 1.36
CTNS-204ENST00000452111 NGEFQ8N5V2 710 aa23.52■■□□□ 1.36
CTNS-204ENST00000452111 SETDB2Q96T68 719 aa23.52■■□□□ 1.36
CTNS-204ENST00000452111 TRIM35Q9UPQ4 493 aa23.52■■□□□ 1.36
CTNS-204ENST00000452111 NRXN2Q9P2S2 1712 aa23.51■■□□□ 1.35
CTNS-204ENST00000452111 LAMB4A4D0S4 1761 aa23.51■■□□□ 1.35
CTNS-204ENST00000452111 DALRD3Q5D0E6 543 aaKnown RBP23.51■■□□□ 1.35
CTNS-204ENST00000452111 CCDC24Q8N4L8 307 aa23.51■■□□□ 1.35
CTNS-204ENST00000452111 ZNF652Q9Y2D9 606 aa23.51■■□□□ 1.35
CTNS-204ENST00000452111 AFDNP55196 1824 aaKnown RBP23.51■■□□□ 1.35
CTNS-204ENST00000452111 BABAM1Q9NWV8 329 aa23.5■■□□□ 1.35
CTNS-204ENST00000452111 LAS1LQ9Y4W2 734 aaKnown RBP23.5■■□□□ 1.35
CTNS-204ENST00000452111 NPHP1O15259 732 aa23.49■■□□□ 1.35
CTNS-204ENST00000452111 MYL6BP14649 208 aa23.49■■□□□ 1.35
CTNS-204ENST00000452111 CCDC184Q52MB2 194 aa23.49■■□□□ 1.35
CTNS-204ENST00000452111 PRR5LQ6MZQ0 368 aa23.49■■□□□ 1.35
CTNS-204ENST00000452111 CLEC4GQ6UXB4 293 aa23.49■■□□□ 1.35
CTNS-204ENST00000452111 ARHGAP27Q6ZUM4 889 aa23.49■■□□□ 1.35
CTNS-204ENST00000452111 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
CTNS-204ENST00000452111 C2CD5Q86YS7 1000 aa23.48■■□□□ 1.35
CTNS-204ENST00000452111 CNBD1Q8NA66 436 aa23.48■■□□□ 1.35
CTNS-204ENST00000452111 APAF1O14727 1248 aa23.47■■□□□ 1.35
CTNS-204ENST00000452111 ATP10DQ9P241 1426 aa23.47■■□□□ 1.35
CTNS-204ENST00000452111 H0YIN7 160 aa23.46■■□□□ 1.35
CTNS-204ENST00000452111 ANP32CO43423 234 aa23.46■■□□□ 1.35
CTNS-204ENST00000452111 ADCY9O60503 1353 aa23.46■■□□□ 1.35
CTNS-204ENST00000452111 EIF2S2P20042 333 aaKnown RBP23.46■■□□□ 1.35
CTNS-204ENST00000452111 BRCA1P38398 1863 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms