RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 GOLGA6L3A6NEY3 463 aa18.89■□□□□ 0.62
CCHCR1-208ENST00000451521 SRCIN1Q9C0H9 1055 aa18.89■□□□□ 0.62
CCHCR1-208ENST00000451521 TBC1D9Q6ZT07 1266 aa18.89■□□□□ 0.61
CCHCR1-208ENST00000451521 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
CCHCR1-208ENST00000451521 ABCA3Q99758 1704 aa18.89■□□□□ 0.61
CCHCR1-208ENST00000451521 CLCN1P35523 988 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 BEND3Q5T5X7 828 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 IFNL2Q8IZJ0 200 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 DNAAF4Q8WXU2 420 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 ADCY9O60503 1353 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 TBC1D2Q9BYX2 928 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 PRDM11Q9NQV5 511 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 LRRFIP2Q9Y608 721 aaKnown RBP18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 CDC45O75419 566 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 UBTFL1P0CB47 393 aaPredicted RBP18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 PANK2Q9BZ23 570 aa18.88■□□□□ 0.61
CCHCR1-208ENST00000451521 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
CCHCR1-208ENST00000451521 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
CCHCR1-208ENST00000451521 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
CCHCR1-208ENST00000451521 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
CCHCR1-208ENST00000451521 PARP4Q9UKK3 1724 aaKnown RBP18.87■□□□□ 0.61
CCHCR1-208ENST00000451521 C5P01031 1676 aa18.86■□□□□ 0.61
CCHCR1-208ENST00000451521 NHSL1Q5SYE7 1610 aa18.86■□□□□ 0.61
CCHCR1-208ENST00000451521 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
CCHCR1-208ENST00000451521 STRN4Q9NRL3 753 aa18.86■□□□□ 0.61
CCHCR1-208ENST00000451521 IBTKQ9P2D0 1353 aaPredicted RBP18.86■□□□□ 0.61
CCHCR1-208ENST00000451521 DCAF5Q96JK2 942 aa18.85■□□□□ 0.61
CCHCR1-208ENST00000451521 PRAMEF22A3QJZ6 481 aa18.85■□□□□ 0.61
CCHCR1-208ENST00000451521 CYP27B1O15528 508 aa18.85■□□□□ 0.61
CCHCR1-208ENST00000451521 ANXA1P04083 346 aa18.85■□□□□ 0.61
CCHCR1-208ENST00000451521 SSH3Q8TE77 659 aa18.85■□□□□ 0.61
CCHCR1-208ENST00000451521 HYPKQ9NX55 129 aa18.85■□□□□ 0.61
CCHCR1-208ENST00000451521 WDR17Q8IZU2 1322 aa18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 SALL3Q9BXA9 1300 aa18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 APBB1O00213 710 aa18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 HSP90AB1P08238 724 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 MCM4P33991 863 aa18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 PROSER3Q2NL68 480 aa18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 GZF1Q9H116 711 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
CCHCR1-208ENST00000451521 POLA2Q14181 598 aa18.83■□□□□ 0.6
CCHCR1-208ENST00000451521 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
CCHCR1-208ENST00000451521 DDX21Q9NR30 783 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCHCR1-208ENST00000451521 COL5A2P05997 1499 aaPredicted RBP18.83■□□□□ 0.6
CCHCR1-208ENST00000451521 PIP4K2BP78356 416 aa18.83■□□□□ 0.6
CCHCR1-208ENST00000451521 KSR2Q6VAB6 950 aa18.83■□□□□ 0.6
CCHCR1-208ENST00000451521 LRRCC1Q9C099 1032 aa18.83■□□□□ 0.6
CCHCR1-208ENST00000451521 ALDH1L1O75891 902 aa18.82■□□□□ 0.6
CCHCR1-208ENST00000451521 PDIA6Q15084 440 aa18.82■□□□□ 0.6
CCHCR1-208ENST00000451521 NBPF7P0C2Y1 421 aaPredicted RBP18.81■□□□□ 0.6
CCHCR1-208ENST00000451521 SDSP20132 328 aa18.81■□□□□ 0.6
CCHCR1-208ENST00000451521 PDE1AP54750 535 aa18.81■□□□□ 0.6
CCHCR1-208ENST00000451521 SLC39A6Q13433 755 aa18.81■□□□□ 0.6
CCHCR1-208ENST00000451521 MAP3K2Q9Y2U5 619 aa18.81■□□□□ 0.6
CCHCR1-208ENST00000451521 TOM1L2Q6ZVM7 507 aa18.79■□□□□ 0.6
CCHCR1-208ENST00000451521 PPP1R42Q7Z4L9 355 aa18.79■□□□□ 0.6
CCHCR1-208ENST00000451521 SPRYD3Q8NCJ5 442 aa18.79■□□□□ 0.6
CCHCR1-208ENST00000451521 KIF2CQ99661 725 aa18.79■□□□□ 0.6
CCHCR1-208ENST00000451521 RAB11FIP3O75154 756 aa18.79■□□□□ 0.6
CCHCR1-208ENST00000451521 SNX21Q969T3 373 aa18.79■□□□□ 0.6
CCHCR1-208ENST00000451521 GLI3P10071 1580 aa18.78■□□□□ 0.6
CCHCR1-208ENST00000451521 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
CCHCR1-208ENST00000451521 DDX58O95786 925 aaKnown RBP18.78■□□□□ 0.6
CCHCR1-208ENST00000451521 MTX1Q13505 466 aa18.78■□□□□ 0.6
CCHCR1-208ENST00000451521 ZNF496Q96IT1 587 aaPredicted RBP18.78■□□□□ 0.6
CCHCR1-208ENST00000451521 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
CCHCR1-208ENST00000451521 TRAK2O60296 914 aa18.77■□□□□ 0.6
CCHCR1-208ENST00000451521 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.6
CCHCR1-208ENST00000451521 MRE11P49959 708 aa18.77■□□□□ 0.59
CCHCR1-208ENST00000451521 CARD10Q9BWT7 1032 aa18.77■□□□□ 0.59
CCHCR1-208ENST00000451521 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.59
CCHCR1-208ENST00000451521 SHANK3Q9BYB0 1731 aa18.76■□□□□ 0.59
CCHCR1-208ENST00000451521 PCDH11XQ9BZA7 1347 aa18.76■□□□□ 0.59
CCHCR1-208ENST00000451521 PCDH11YQ9BZA8 1340 aa18.76■□□□□ 0.59
CCHCR1-208ENST00000451521 LINS1Q8NG48 757 aa18.76■□□□□ 0.59
CCHCR1-208ENST00000451521 UTYO14607 1347 aa18.76■□□□□ 0.59
CCHCR1-208ENST00000451521 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
CCHCR1-208ENST00000451521 HDAC5Q9UQL6 1122 aa18.76■□□□□ 0.59
CCHCR1-208ENST00000451521 AOX1Q06278 1338 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 MX1P20591 662 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 CABP4P57796 275 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 FMNL2Q96PY5 1086 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 CASC1Q6TDU7 716 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 TTC5Q8N0Z6 440 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 CHMP5Q9NZZ3 219 aa18.75■□□□□ 0.59
CCHCR1-208ENST00000451521 NKX1-1Q15270 411 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-208ENST00000451521 LRP10Q7Z4F1 713 aa18.74■□□□□ 0.59
CCHCR1-208ENST00000451521 UBR2Q8IWV8 1755 aa18.74■□□□□ 0.59
CCHCR1-208ENST00000451521 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
CCHCR1-208ENST00000451521 HSCBQ8IWL3 235 aa18.74■□□□□ 0.59
CCHCR1-208ENST00000451521 SURF6O75683 361 aaKnown RBP18.73■□□□□ 0.59
CCHCR1-208ENST00000451521 ADAMTS2O95450 1211 aa18.73■□□□□ 0.59
CCHCR1-208ENST00000451521 USP26Q9BXU7 913 aa18.73■□□□□ 0.59
CCHCR1-208ENST00000451521 PAPPAQ13219 1627 aa18.73■□□□□ 0.59
CCHCR1-208ENST00000451521 EVA1CP58658 441 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms