RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 GOLGB1Q14789 3259 aaKnown RBP8.38□□□□□ -1.07
USP46-202ENST00000451218 C4AP0C0L4 1744 aa8.38□□□□□ -1.07
USP46-202ENST00000451218 C4BP0C0L5 1744 aa8.38□□□□□ -1.07
USP46-202ENST00000451218 ZNF530Q6P9A1 599 aaPredicted RBP8.38□□□□□ -1.07
USP46-202ENST00000451218 OTUD7AQ8TE49 926 aaPredicted RBP8.38□□□□□ -1.07
USP46-202ENST00000451218 COL24A1Q17RW2 1714 aa8.38□□□□□ -1.07
USP46-202ENST00000451218 C14orf37Q86TY3 774 aa8.38□□□□□ -1.07
USP46-202ENST00000451218 CHPF2Q9P2E5 772 aa8.38□□□□□ -1.07
USP46-202ENST00000451218 SCN7AQ01118 1682 aa8.38□□□□□ -1.07
USP46-202ENST00000451218 PNMA6EA0A0J9YXQ4 647 aa8.38□□□□□ -1.07
USP46-202ENST00000451218 POLA2Q14181 598 aa8.37□□□□□ -1.07
USP46-202ENST00000451218 FTSJ3Q8IY81 847 aaKnown RBP8.37□□□□□ -1.07
USP46-202ENST00000451218 BTAF1O14981 1849 aa8.37□□□□□ -1.07
USP46-202ENST00000451218 IPO8O15397 1037 aaKnown RBP8.37□□□□□ -1.07
USP46-202ENST00000451218 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
USP46-202ENST00000451218 BCL9LQ86UU0 1499 aa8.37□□□□□ -1.07
USP46-202ENST00000451218 API5Q9BZZ5 524 aaKnown RBP8.37□□□□□ -1.07
USP46-202ENST00000451218 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
USP46-202ENST00000451218 BRWD3Q6RI45 1802 aa8.37□□□□□ -1.07
USP46-202ENST00000451218 CHD1LQ86WJ1 897 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
USP46-202ENST00000451218 COL15A1P39059 1388 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 PLEKHM2Q8IWE5 1019 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 C16orf71Q8IYS4 520 aaPredicted RBP8.36□□□□□ -1.07
USP46-202ENST00000451218 BCL9O00512 1426 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 SPEF2Q9C093 1822 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 CASP7P55210 303 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 ZNF790Q6PG37 636 aa8.36□□□□□ -1.07
USP46-202ENST00000451218 MYO5AQ9Y4I1 1855 aaKnown RBP8.36□□□□□ -1.07
USP46-202ENST00000451218 ANXA1P04083 346 aa8.35□□□□□ -1.07
USP46-202ENST00000451218 IGKV5-2P06315 115 aa8.35□□□□□ -1.07
USP46-202ENST00000451218 PLEKHO1Q53GL0 409 aaPredicted RBP8.35□□□□□ -1.07
USP46-202ENST00000451218 SLC4A9Q96Q91 983 aa8.35□□□□□ -1.07
USP46-202ENST00000451218 BTBD11A6QL63 1104 aa8.35□□□□□ -1.07
USP46-202ENST00000451218 RGS3P49796 1198 aa8.35□□□□□ -1.07
USP46-202ENST00000451218 RWDD1Q9H446 243 aaPredicted RBP8.35□□□□□ -1.07
USP46-202ENST00000451218 LAMA4Q16363 1823 aa8.35□□□□□ -1.07
USP46-202ENST00000451218 NBPF26B4DH59 902 aa8.34□□□□□ -1.07
USP46-202ENST00000451218 SLC39A6Q13433 755 aa8.34□□□□□ -1.07
USP46-202ENST00000451218 NBPF14Q5TI25 921 aa8.34□□□□□ -1.07
USP46-202ENST00000451218 NBPF10Q6P3W6 841 aaKnown RBP8.34□□□□□ -1.07
USP46-202ENST00000451218 NBPF15Q8N660 670 aa8.34□□□□□ -1.07
USP46-202ENST00000451218 IPO9Q96P70 1041 aaKnown RBP8.34□□□□□ -1.07
USP46-202ENST00000451218 AKAP11Q9UKA4 1901 aa8.34□□□□□ -1.07
USP46-202ENST00000451218 NBPF7P0C2Y1 421 aaPredicted RBP8.34□□□□□ -1.07
USP46-202ENST00000451218 NFATC2IPQ8NCF5 419 aa8.34□□□□□ -1.07
USP46-202ENST00000451218 RTF1Q92541 710 aaKnown RBP8.34□□□□□ -1.07
USP46-202ENST00000451218 ZNF496Q96IT1 587 aaPredicted RBP8.34□□□□□ -1.07
USP46-202ENST00000451218 TBC1D32Q96NH3 1257 aa8.34□□□□□ -1.07
USP46-202ENST00000451218 CANXP27824 592 aaKnown RBP8.34□□□□□ -1.07
USP46-202ENST00000451218 HOXD11P31277 338 aaPredicted RBP8.34□□□□□ -1.07
USP46-202ENST00000451218 MTX1Q13505 466 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
USP46-202ENST00000451218 NECTIN2Q92692 538 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 DOCK2Q92608 1830 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 DDIT3P35638 169 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 CCDC30Q5VVM6 783 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 OSBPL3Q9H4L5 887 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 SSH3Q8TE77 659 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 DCAF5Q96JK2 942 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 IL25Q9H293 177 aa8.33□□□□□ -1.08
USP46-202ENST00000451218 NEFMP07197 916 aa8.32□□□□□ -1.08
USP46-202ENST00000451218 BMP2KLQ5H9B9 411 aa8.32□□□□□ -1.08
USP46-202ENST00000451218 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
USP46-202ENST00000451218 ANTXR1Q9H6X2 564 aa8.32□□□□□ -1.08
USP46-202ENST00000451218 PLEKHG5O94827 1062 aa8.32□□□□□ -1.08
USP46-202ENST00000451218 CCT4P50991 539 aaKnown RBP8.31□□□□□ -1.08
USP46-202ENST00000451218 LNPKQ9C0E8 428 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 MYH7P12883 1935 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 IFNL2Q8IZJ0 200 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 TAF1P21675 1872 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 PI4KAP2A4QPH2 592 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 SMARCA5O60264 1052 aaPredicted RBP8.31□□□□□ -1.08
USP46-202ENST00000451218 ATP8B2P98198 1209 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 RPAP2Q8IXW5 612 aaPredicted RBP8.31□□□□□ -1.08
USP46-202ENST00000451218 PI4KAP1Q8N8J0 262 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 IL17RAQ96F46 866 aa8.31□□□□□ -1.08
USP46-202ENST00000451218 USP42Q9H9J4 1324 aaKnown RBP8.31□□□□□ -1.08
USP46-202ENST00000451218 LMOD2Q6P5Q4 547 aa8.3□□□□□ -1.08
USP46-202ENST00000451218 UBR3Q6ZT12 1888 aa8.3□□□□□ -1.08
USP46-202ENST00000451218 RFX5P48382 616 aaPredicted RBP8.3□□□□□ -1.08
USP46-202ENST00000451218 EPHA10Q5JZY3 1008 aa8.3□□□□□ -1.08
USP46-202ENST00000451218 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP46-202ENST00000451218 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
USP46-202ENST00000451218 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
USP46-202ENST00000451218 ATF5Q9Y2D1 282 aaPredicted RBP8.3□□□□□ -1.08
USP46-202ENST00000451218 LRRFIP2Q9Y608 721 aaKnown RBP8.3□□□□□ -1.08
USP46-202ENST00000451218 ZBTB7CA1YPR0 619 aa8.3□□□□□ -1.08
USP46-202ENST00000451218 SPATA31A1Q5TZJ5 1347 aa8.29□□□□□ -1.08
USP46-202ENST00000451218 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
USP46-202ENST00000451218 PI4K2BQ8TCG2 481 aa8.29□□□□□ -1.08
USP46-202ENST00000451218 ZNF646O15015 1829 aaPredicted RBP8.29□□□□□ -1.08
USP46-202ENST00000451218 TTC22Q5TAA0 569 aa8.29□□□□□ -1.08
USP46-202ENST00000451218 TATP17735 454 aaPredicted RBP8.29□□□□□ -1.08
USP46-202ENST00000451218 CWF19L2Q2TBE0 894 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms