RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 DDB1Q16531 1140 aa10.45□□□□□ -0.74
NECAP1-202ENST00000450991 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
NECAP1-202ENST00000450991 CHMP4BQ9H444 224 aaKnown RBP10.45□□□□□ -0.74
NECAP1-202ENST00000450991 RWDD1Q9H446 243 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-202ENST00000450991 VPS72Q15906 364 aa10.44□□□□□ -0.74
NECAP1-202ENST00000450991 UBE2Q2Q8WVN8 375 aa10.44□□□□□ -0.74
NECAP1-202ENST00000450991 CHPF2Q9P2E5 772 aa10.44□□□□□ -0.74
NECAP1-202ENST00000450991 THRAP3Q9Y2W1 955 aaKnown RBP10.44□□□□□ -0.74
NECAP1-202ENST00000450991 ERVV-2B6SEH9 535 aa10.44□□□□□ -0.74
NECAP1-202ENST00000450991 F6X3S4 739 aa10.44□□□□□ -0.74
NECAP1-202ENST00000450991 SYTL4Q96C24 671 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-202ENST00000450991 PHAXQ9H814 394 aaKnown RBP10.44□□□□□ -0.74
NECAP1-202ENST00000450991 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
NECAP1-202ENST00000450991 AFF2P51816 1311 aa10.43□□□□□ -0.74
NECAP1-202ENST00000450991 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
NECAP1-202ENST00000450991 TNS2Q63HR2 1409 aa10.43□□□□□ -0.74
NECAP1-202ENST00000450991 PTCD1O75127 700 aaKnown RBP10.43□□□□□ -0.74
NECAP1-202ENST00000450991 FLIIQ13045 1269 aa10.43□□□□□ -0.74
NECAP1-202ENST00000450991 PROSER3Q2NL68 480 aa10.43□□□□□ -0.74
NECAP1-202ENST00000450991 PIP4K2AP48426 406 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-202ENST00000450991 FKBP5Q13451 457 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-202ENST00000450991 SLC4A10Q6U841 1118 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 BARGINQ6ZT62 677 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-202ENST00000450991 PIGBQ92521 554 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 ACSBG1Q96GR2 724 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 CDCA7Q9BWT1 371 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-202ENST00000450991 TPRNQ4KMQ1 711 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 CHMP4AQ9BY43 222 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
NECAP1-202ENST00000450991 ATP10DQ9P241 1426 aa10.41□□□□□ -0.74
NECAP1-202ENST00000450991 PRIM1P49642 420 aaKnown RBP10.41□□□□□ -0.74
NECAP1-202ENST00000450991 ASAP1Q9ULH1 1129 aa10.41□□□□□ -0.74
NECAP1-202ENST00000450991 USP16Q9Y5T5 823 aa10.41□□□□□ -0.74
NECAP1-202ENST00000450991 C1orf115Q9H7X2 142 aa10.41□□□□□ -0.74
NECAP1-202ENST00000450991 KCPQ6ZWJ8 1503 aa10.4□□□□□ -0.74
NECAP1-202ENST00000450991 DOT1LQ8TEK3 1739 aa10.4□□□□□ -0.74
NECAP1-202ENST00000450991 ARFGEF2Q9Y6D5 1785 aa10.4□□□□□ -0.74
NECAP1-202ENST00000450991 SNRPA1P09661 255 aaKnown RBP10.4□□□□□ -0.74
NECAP1-202ENST00000450991 CCT4P50991 539 aaKnown RBP10.4□□□□□ -0.74
NECAP1-202ENST00000450991 SMC5Q8IY18 1101 aa10.4□□□□□ -0.74
NECAP1-202ENST00000450991 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.74
NECAP1-202ENST00000450991 AFDNP55196 1824 aaKnown RBP10.4□□□□□ -0.74
NECAP1-202ENST00000450991 MYL6BP14649 208 aa10.39□□□□□ -0.75
NECAP1-202ENST00000450991 FAM182BQ5T319 152 aa10.39□□□□□ -0.75
NECAP1-202ENST00000450991 SIRT2Q8IXJ6 389 aa10.39□□□□□ -0.75
NECAP1-202ENST00000450991 ATG3Q9NT62 314 aa10.39□□□□□ -0.75
NECAP1-202ENST00000450991 DBF4Q9UBU7 674 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-202ENST00000450991 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.39□□□□□ -0.75
NECAP1-202ENST00000450991 RGS3P49796 1198 aa10.38□□□□□ -0.75
NECAP1-202ENST00000450991 AIMP1Q12904 312 aaKnown RBP10.38□□□□□ -0.75
NECAP1-202ENST00000450991 PDIA6Q15084 440 aa10.38□□□□□ -0.75
NECAP1-202ENST00000450991 GJD4Q96KN9 370 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-202ENST00000450991 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
NECAP1-202ENST00000450991 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
NECAP1-202ENST00000450991 PDE4AP27815 886 aa10.38□□□□□ -0.75
NECAP1-202ENST00000450991 MEIS3Q99687 375 aa10.38□□□□□ -0.75
NECAP1-202ENST00000450991 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
NECAP1-202ENST00000450991 KCNQ2O43526 872 aa10.37□□□□□ -0.75
NECAP1-202ENST00000450991 ADCY9O60503 1353 aa10.37□□□□□ -0.75
NECAP1-202ENST00000450991 PI4KAP2A4QPH2 592 aa10.37□□□□□ -0.75
NECAP1-202ENST00000450991 BCL9O00512 1426 aa10.37□□□□□ -0.75
NECAP1-202ENST00000450991 PI4KAP1Q8N8J0 262 aa10.37□□□□□ -0.75
NECAP1-202ENST00000450991 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
NECAP1-202ENST00000450991 DDX21Q9NR30 783 aaKnown RBP eCLIP10.37□□□□□ -0.75
NECAP1-202ENST00000450991 KAT6BQ8WYB5 2073 aa10.36□□□□□ -0.75
NECAP1-202ENST00000450991 A1BGP04217 495 aa10.36□□□□□ -0.75
NECAP1-202ENST00000450991 ANKRD44Q8N8A2 993 aa10.36□□□□□ -0.75
NECAP1-202ENST00000450991 TRPC5Q9UL62 973 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-202ENST00000450991 GCC1Q96CN9 775 aa10.36□□□□□ -0.75
NECAP1-202ENST00000450991 CEP85Q6P2H3 762 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 PTF1AQ7RTS3 328 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 DNAJC10Q8IXB1 793 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 RPAP2Q8IXW5 612 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-202ENST00000450991 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 SLC4A9Q96Q91 983 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 HYPKQ9NX55 129 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 ATRNO75882 1429 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 NUCB1Q02818 461 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 C8orf34Q49A92 452 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 NBPF14Q5TI25 921 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 NBPF10Q6P3W6 841 aaKnown RBP10.35□□□□□ -0.75
NECAP1-202ENST00000450991 COPS6Q7L5N1 327 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 NBPF15Q8N660 670 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 DNAAF4Q8WXU2 420 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 MAP3K2Q9Y2U5 619 aa10.35□□□□□ -0.75
NECAP1-202ENST00000450991 TJP1Q07157 1748 aa10.34□□□□□ -0.75
NECAP1-202ENST00000450991 TUBGCP6Q96RT7 1819 aa10.34□□□□□ -0.75
NECAP1-202ENST00000450991 SEPT12Q8IYM1 358 aa10.34□□□□□ -0.75
NECAP1-202ENST00000450991 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-202ENST00000450991 FAM161AQ3B820 660 aa10.34□□□□□ -0.75
NECAP1-202ENST00000450991 BEND3Q5T5X7 828 aa10.34□□□□□ -0.75
NECAP1-202ENST00000450991 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
NECAP1-202ENST00000450991 GNAI3P08754 354 aa10.33□□□□□ -0.76
NECAP1-202ENST00000450991 USP44Q9H0E7 712 aa10.33□□□□□ -0.76
NECAP1-202ENST00000450991 DCTPP1Q9H773 170 aa10.33□□□□□ -0.76
NECAP1-202ENST00000450991 GNAI2P04899 355 aa10.33□□□□□ -0.76
NECAP1-202ENST00000450991 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms