RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 WWC3Q9ULE0 1092 aa23.07■■□□□ 1.28
CLTCL1-203ENST00000449918 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
CLTCL1-203ENST00000449918 COL15A1P39059 1388 aa23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 C4AP0C0L4 1744 aa23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 A0A087WZG4 1122 aa23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 A0A0G2JLW4 131 aa23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 TM4SF1P30408 202 aa23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 RALBP1Q15311 655 aa23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 MCM10Q7L590 875 aa23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
CLTCL1-203ENST00000449918 DDR1Q08345 913 aa23.04■■□□□ 1.28
CLTCL1-203ENST00000449918 DDX10Q13206 875 aaKnown RBP23.04■■□□□ 1.28
CLTCL1-203ENST00000449918 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
CLTCL1-203ENST00000449918 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
CLTCL1-203ENST00000449918 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
CLTCL1-203ENST00000449918 DPEP1P16444 411 aa23.03■■□□□ 1.28
CLTCL1-203ENST00000449918 EIF5P55010 431 aaKnown RBP23.03■■□□□ 1.28
CLTCL1-203ENST00000449918 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
CLTCL1-203ENST00000449918 KCNQ3O43525 872 aa23.02■■□□□ 1.28
CLTCL1-203ENST00000449918 DCTN1Q14203 1278 aa23.01■■□□□ 1.27
CLTCL1-203ENST00000449918 BCS1LQ9Y276 419 aa23.01■■□□□ 1.27
CLTCL1-203ENST00000449918 IL6STP40189 918 aaPredicted RBP23■■□□□ 1.27
CLTCL1-203ENST00000449918 NFIXQ14938 502 aa23■■□□□ 1.27
CLTCL1-203ENST00000449918 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
CLTCL1-203ENST00000449918 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
CLTCL1-203ENST00000449918 KIF13BQ9NQT8 1826 aa23■■□□□ 1.27
CLTCL1-203ENST00000449918 SIPA1L3O60292 1781 aaPredicted RBP22.99■■□□□ 1.27
CLTCL1-203ENST00000449918 SNRPA1P09661 255 aaKnown RBP22.99■■□□□ 1.27
CLTCL1-203ENST00000449918 BCL2L12Q9HB09 334 aa22.99■■□□□ 1.27
CLTCL1-203ENST00000449918 PIM2Q9P1W9 311 aa22.99■■□□□ 1.27
CLTCL1-203ENST00000449918 ZNF330Q9Y3S2 320 aaPredicted RBP22.99■■□□□ 1.27
CLTCL1-203ENST00000449918 A1BGP04217 495 aa22.98■■□□□ 1.27
CLTCL1-203ENST00000449918 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
CLTCL1-203ENST00000449918 SERPINB2P05120 415 aa22.96■■□□□ 1.27
CLTCL1-203ENST00000449918 KCNA3P22001 575 aa22.96■■□□□ 1.27
CLTCL1-203ENST00000449918 NFE2L2Q16236 605 aa22.96■■□□□ 1.27
CLTCL1-203ENST00000449918 PNISRQ8TF01 805 aaKnown RBP22.96■■□□□ 1.27
CLTCL1-203ENST00000449918 USP16Q9Y5T5 823 aa22.96■■□□□ 1.27
CLTCL1-203ENST00000449918 DALRD3Q5D0E6 543 aaKnown RBP22.95■■□□□ 1.26
CLTCL1-203ENST00000449918 TBC1D2BQ9UPU7 963 aa22.95■■□□□ 1.26
CLTCL1-203ENST00000449918 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
CLTCL1-203ENST00000449918 ARHGAP27Q6ZUM4 889 aa22.94■■□□□ 1.26
CLTCL1-203ENST00000449918 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
CLTCL1-203ENST00000449918 BICDL1Q6ZP65 573 aa22.93■■□□□ 1.26
CLTCL1-203ENST00000449918 N4BP2Q86UW6 1770 aaPredicted RBP22.93■■□□□ 1.26
CLTCL1-203ENST00000449918 ATP10DQ9P241 1426 aa22.92■■□□□ 1.26
CLTCL1-203ENST00000449918 KIAA1551Q9HCM1 1747 aa22.92■■□□□ 1.26
CLTCL1-203ENST00000449918 CHRNA5P30532 468 aa22.92■■□□□ 1.26
CLTCL1-203ENST00000449918 MIS18AQ9NYP9 233 aa22.92■■□□□ 1.26
CLTCL1-203ENST00000449918 PRAMEF22A3QJZ6 481 aa22.91■■□□□ 1.26
CLTCL1-203ENST00000449918 C1QTNF8P60827 252 aa22.91■■□□□ 1.26
CLTCL1-203ENST00000449918 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
CLTCL1-203ENST00000449918 DZIP3Q86Y13 1208 aaKnown RBP22.91■■□□□ 1.26
CLTCL1-203ENST00000449918 GPBP1L1Q9HC44 474 aaPredicted RBP22.9■■□□□ 1.26
CLTCL1-203ENST00000449918 ADCY9O60503 1353 aa22.89■■□□□ 1.26
CLTCL1-203ENST00000449918 CAMTA2O94983 1202 aa22.89■■□□□ 1.25
CLTCL1-203ENST00000449918 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
CLTCL1-203ENST00000449918 PIP4K2AP48426 406 aaPredicted RBP22.87■■□□□ 1.25
CLTCL1-203ENST00000449918 THUMPD2Q9BTF0 503 aaKnown RBP22.87■■□□□ 1.25
CLTCL1-203ENST00000449918 CARMIL3Q8ND23 1372 aa22.87■■□□□ 1.25
CLTCL1-203ENST00000449918 H0YIN7 160 aa22.86■■□□□ 1.25
CLTCL1-203ENST00000449918 RIPK4P57078 832 aa22.86■■□□□ 1.25
CLTCL1-203ENST00000449918 CLEC4GQ6UXB4 293 aa22.86■■□□□ 1.25
CLTCL1-203ENST00000449918 C2CD5Q86YS7 1000 aa22.86■■□□□ 1.25
CLTCL1-203ENST00000449918 ZNF526Q8TF50 670 aaPredicted RBP22.86■■□□□ 1.25
CLTCL1-203ENST00000449918 PDZRN3Q9UPQ7 1066 aa22.86■■□□□ 1.25
CLTCL1-203ENST00000449918 ZNF652Q9Y2D9 606 aa22.86■■□□□ 1.25
CLTCL1-203ENST00000449918 NPHP1O15259 732 aa22.85■■□□□ 1.25
CLTCL1-203ENST00000449918 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
CLTCL1-203ENST00000449918 BRIP1Q9BX63 1249 aa22.85■■□□□ 1.25
CLTCL1-203ENST00000449918 NBPF26B4DH59 902 aa22.84■■□□□ 1.25
CLTCL1-203ENST00000449918 PDE6BP35913 854 aa22.84■■□□□ 1.25
CLTCL1-203ENST00000449918 EIF4A1P60842 406 aaKnown RBP22.84■■□□□ 1.25
CLTCL1-203ENST00000449918 WDR43Q15061 677 aaKnown RBP eCLIP22.84■■□□□ 1.25
CLTCL1-203ENST00000449918 NBPF10Q6P3W6 841 aaKnown RBP22.84■■□□□ 1.25
CLTCL1-203ENST00000449918 NBPF15Q8N660 670 aa22.84■■□□□ 1.25
CLTCL1-203ENST00000449918 NRXN2Q9P2S2 1712 aa22.83■■□□□ 1.25
CLTCL1-203ENST00000449918 RGL2O15211 777 aa22.83■■□□□ 1.25
CLTCL1-203ENST00000449918 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
CLTCL1-203ENST00000449918 TTLL6Q8N841 843 aa22.83■■□□□ 1.25
CLTCL1-203ENST00000449918 BRCA1P38398 1863 aaKnown RBP22.82■■□□□ 1.24
CLTCL1-203ENST00000449918 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
CLTCL1-203ENST00000449918 PRR5LQ6MZQ0 368 aa22.82■■□□□ 1.24
CLTCL1-203ENST00000449918 CNBD1Q8NA66 436 aa22.82■■□□□ 1.24
CLTCL1-203ENST00000449918 AFDNP55196 1824 aaKnown RBP22.82■■□□□ 1.24
CLTCL1-203ENST00000449918 ST5P78524 1137 aa22.81■■□□□ 1.24
CLTCL1-203ENST00000449918 PRKRIP1Q9H875 184 aaPredicted RBP22.81■■□□□ 1.24
CLTCL1-203ENST00000449918 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
CLTCL1-203ENST00000449918 TSPYL4Q9UJ04 414 aa22.81■■□□□ 1.24
CLTCL1-203ENST00000449918 SCN7AQ01118 1682 aa22.81■■□□□ 1.24
CLTCL1-203ENST00000449918 DLG5Q8TDM6 1919 aa22.8■■□□□ 1.24
CLTCL1-203ENST00000449918 C9orf131Q5VYM1 1079 aa22.8■■□□□ 1.24
CLTCL1-203ENST00000449918 NBPF5PQ86XG9 351 aaPredicted RBP22.79■■□□□ 1.24
CLTCL1-203ENST00000449918 ZNF622Q969S3 477 aaKnown RBP eCLIP22.79■■□□□ 1.24
CLTCL1-203ENST00000449918 RUNDC1Q96C34 613 aa22.79■■□□□ 1.24
CLTCL1-203ENST00000449918 ARFGEF1Q9Y6D6 1849 aa22.78■■□□□ 1.24
CLTCL1-203ENST00000449918 CCDC146Q8IYE0 955 aa22.78■■□□□ 1.24
CLTCL1-203ENST00000449918 CCDC24Q8N4L8 307 aa22.78■■□□□ 1.24
CLTCL1-203ENST00000449918 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.24
CLTCL1-203ENST00000449918 NEUROD2Q15784 382 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms