RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 STK31Q9BXU1 1019 aa18.02■□□□□ 0.47
SHMT2-203ENST00000449049 RREB1Q92766 1687 aa18.02■□□□□ 0.47
SHMT2-203ENST00000449049 ERBB4Q15303 1308 aa18.01■□□□□ 0.47
SHMT2-203ENST00000449049 ATP6V1AP38606 617 aa18.01■□□□□ 0.47
SHMT2-203ENST00000449049 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
SHMT2-203ENST00000449049 DBF4Q9UBU7 674 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-203ENST00000449049 KIF16BQ96L93 1317 aa18■□□□□ 0.47
SHMT2-203ENST00000449049 RRP1P56182 461 aaKnown RBP18■□□□□ 0.47
SHMT2-203ENST00000449049 ITPK1Q13572 414 aa18■□□□□ 0.47
SHMT2-203ENST00000449049 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
SHMT2-203ENST00000449049 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-203ENST00000449049 PDIA6Q15084 440 aa17.99■□□□□ 0.47
SHMT2-203ENST00000449049 DDX21Q9NR30 783 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHMT2-203ENST00000449049 TAF1LQ8IZX4 1826 aa17.99■□□□□ 0.47
SHMT2-203ENST00000449049 PLSCR1O15162 318 aa17.99■□□□□ 0.47
SHMT2-203ENST00000449049 STARD3NLO95772 234 aa17.99■□□□□ 0.47
SHMT2-203ENST00000449049 EP400Q96L91 3159 aa17.98■□□□□ 0.47
SHMT2-203ENST00000449049 CCNL1Q9UK58 526 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-203ENST00000449049 APBA3O96018 575 aa17.97■□□□□ 0.47
SHMT2-203ENST00000449049 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
SHMT2-203ENST00000449049 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
SHMT2-203ENST00000449049 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
SHMT2-203ENST00000449049 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
SHMT2-203ENST00000449049 A1BGP04217 495 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 ARHGAP45Q92619 1136 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 NBPF26B4DH59 902 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 NBPF14Q5TI25 921 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 NBPF10Q6P3W6 841 aaKnown RBP17.96■□□□□ 0.47
SHMT2-203ENST00000449049 G2E3Q7L622 706 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 NBPF15Q8N660 670 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 LINC00116Q8NCU8 138 aa17.96■□□□□ 0.47
SHMT2-203ENST00000449049 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.47
SHMT2-203ENST00000449049 PTPRCP08575 1304 aa17.96■□□□□ 0.46
SHMT2-203ENST00000449049 ANXA1P04083 346 aa17.95■□□□□ 0.46
SHMT2-203ENST00000449049 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
SHMT2-203ENST00000449049 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
SHMT2-203ENST00000449049 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
SHMT2-203ENST00000449049 PLIN1O60240 522 aa17.95■□□□□ 0.46
SHMT2-203ENST00000449049 FLIIQ13045 1269 aa17.95■□□□□ 0.46
SHMT2-203ENST00000449049 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
SHMT2-203ENST00000449049 KCNQ4P56696 695 aa17.94■□□□□ 0.46
SHMT2-203ENST00000449049 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
SHMT2-203ENST00000449049 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
SHMT2-203ENST00000449049 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
SHMT2-203ENST00000449049 MYL6BP14649 208 aa17.93■□□□□ 0.46
SHMT2-203ENST00000449049 CANXP27824 592 aaKnown RBP17.93■□□□□ 0.46
SHMT2-203ENST00000449049 CRKLP46109 303 aaKnown RBP17.93■□□□□ 0.46
SHMT2-203ENST00000449049 PIP4K2AP48426 406 aaPredicted RBP17.93■□□□□ 0.46
SHMT2-203ENST00000449049 INTS5Q6P9B9 1019 aaKnown RBP17.93■□□□□ 0.46
SHMT2-203ENST00000449049 ATF7IPQ6VMQ6 1270 aa17.93■□□□□ 0.46
SHMT2-203ENST00000449049 ZBTB1Q9Y2K1 713 aa17.93■□□□□ 0.46
SHMT2-203ENST00000449049 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
SHMT2-203ENST00000449049 TRIM27P14373 513 aa17.93■□□□□ 0.46
SHMT2-203ENST00000449049 TXNRD1Q16881 649 aa17.93■□□□□ 0.46
SHMT2-203ENST00000449049 PROM2Q8N271 834 aa17.93■□□□□ 0.46
SHMT2-203ENST00000449049 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
SHMT2-203ENST00000449049 API5Q9BZZ5 524 aaKnown RBP17.92■□□□□ 0.46
SHMT2-203ENST00000449049 IL6STP40189 918 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-203ENST00000449049 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
SHMT2-203ENST00000449049 PDE3AQ14432 1141 aa17.9■□□□□ 0.46
SHMT2-203ENST00000449049 CCDC125Q86Z20 511 aa17.9■□□□□ 0.46
SHMT2-203ENST00000449049 TNNQ9UQP3 1299 aa17.9■□□□□ 0.46
SHMT2-203ENST00000449049 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-203ENST00000449049 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
SHMT2-203ENST00000449049 FKBP5Q13451 457 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-203ENST00000449049 XAGE3Q8WTP9 111 aa17.9■□□□□ 0.46
SHMT2-203ENST00000449049 ABCC4O15439 1325 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 MS4A1P11836 297 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 C20orf194Q5TEA3 1177 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 CAMKK2Q96RR4 588 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 ADCY9O60503 1353 aa17.89■□□□□ 0.45
SHMT2-203ENST00000449049 EIF5P55010 431 aaKnown RBP17.89■□□□□ 0.45
SHMT2-203ENST00000449049 BAG6P46379 1132 aa17.88■□□□□ 0.45
SHMT2-203ENST00000449049 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
SHMT2-203ENST00000449049 ARFGEF2Q9Y6D5 1785 aa17.88■□□□□ 0.45
SHMT2-203ENST00000449049 DDX58O95786 925 aaKnown RBP17.87■□□□□ 0.45
SHMT2-203ENST00000449049 AIMP1Q12904 312 aaKnown RBP17.87■□□□□ 0.45
SHMT2-203ENST00000449049 RLBP1P12271 317 aa17.87■□□□□ 0.45
SHMT2-203ENST00000449049 EN1Q05925 392 aaPredicted RBP17.87■□□□□ 0.45
SHMT2-203ENST00000449049 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
SHMT2-203ENST00000449049 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
SHMT2-203ENST00000449049 EZH2Q15910 746 aaKnown RBP17.86■□□□□ 0.45
SHMT2-203ENST00000449049 KSR2Q6VAB6 950 aa17.86■□□□□ 0.45
SHMT2-203ENST00000449049 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
SHMT2-203ENST00000449049 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
SHMT2-203ENST00000449049 COL15A1P39059 1388 aa17.86■□□□□ 0.45
SHMT2-203ENST00000449049 PI4KAP2A4QPH2 592 aa17.86■□□□□ 0.45
SHMT2-203ENST00000449049 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
SHMT2-203ENST00000449049 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
SHMT2-203ENST00000449049 PI4KAP1Q8N8J0 262 aa17.86■□□□□ 0.45
SHMT2-203ENST00000449049 F6X3S4 739 aa17.85■□□□□ 0.45
SHMT2-203ENST00000449049 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
SHMT2-203ENST00000449049 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
SHMT2-203ENST00000449049 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
SHMT2-203ENST00000449049 BCORQ6W2J9 1755 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms