RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 NLRP8Q86W28 1048 aa9.68□□□□□ -0.86
SEMA3A-205ENST00000448879 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
SEMA3A-205ENST00000448879 ZCCHC2Q9C0B9 1178 aaKnown RBP9.68□□□□□ -0.86
SEMA3A-205ENST00000448879 ALG2Q9H553 416 aa9.68□□□□□ -0.86
SEMA3A-205ENST00000448879 PCDHGA11Q9Y5H2 935 aa9.68□□□□□ -0.86
SEMA3A-205ENST00000448879 A0A1W2PNR3 127 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 DCDC2BA2VCK2 349 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 SHISA8B8ZZ34 492 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 CTBSQ01459 385 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 FLIIQ13045 1269 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 DEPDC4Q8N2C3 294 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 DCAF5Q96JK2 942 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 MKL2Q9ULH7 1088 aa9.67□□□□□ -0.86
SEMA3A-205ENST00000448879 USP17L5A8MUK1 530 aa9.66□□□□□ -0.86
SEMA3A-205ENST00000448879 SUZ12Q15022 739 aaKnown RBP9.66□□□□□ -0.86
SEMA3A-205ENST00000448879 BICDL1Q6ZP65 573 aa9.66□□□□□ -0.86
SEMA3A-205ENST00000448879 NDFIP2Q9NV92 336 aa9.66□□□□□ -0.86
SEMA3A-205ENST00000448879 GGA1Q9UJY5 639 aa9.66□□□□□ -0.86
SEMA3A-205ENST00000448879 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
SEMA3A-205ENST00000448879 C2CD2LO14523 706 aa9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 KHNYNO15037 678 aaKnown RBP9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 SNRPNP63162 240 aaKnown RBP9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 MTFR1Q15390 333 aa9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 C1orf229Q6ZS94 237 aaPredicted RBP9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 DNAAF2Q9NVR5 837 aaKnown RBP9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 USP3Q9Y6I4 520 aa9.65□□□□□ -0.86
SEMA3A-205ENST00000448879 SLCO4C1Q6ZQN7 724 aa9.64□□□□□ -0.87
SEMA3A-205ENST00000448879 ZNF358Q9NW07 568 aa9.64□□□□□ -0.87
SEMA3A-205ENST00000448879 ZDHHC3Q9NYG2 299 aa9.64□□□□□ -0.87
SEMA3A-205ENST00000448879 IQSEC3Q9UPP2 1182 aaPredicted RBP9.64□□□□□ -0.87
SEMA3A-205ENST00000448879 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
SEMA3A-205ENST00000448879 TRIM50Q86XT4 487 aa9.63□□□□□ -0.87
SEMA3A-205ENST00000448879 POM121CA8CG34 1229 aa9.62□□□□□ -0.87
SEMA3A-205ENST00000448879 NEURL1BA8MQ27 555 aa9.62□□□□□ -0.87
SEMA3A-205ENST00000448879 MSTNO14793 375 aa9.62□□□□□ -0.87
SEMA3A-205ENST00000448879 ARAFP10398 606 aa9.62□□□□□ -0.87
SEMA3A-205ENST00000448879 MAPTP10636 758 aaKnown RBP9.62□□□□□ -0.87
SEMA3A-205ENST00000448879 CD33P20138 364 aa9.62□□□□□ -0.87
SEMA3A-205ENST00000448879 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
SEMA3A-205ENST00000448879 ZIC5Q96T25 663 aa9.61□□□□□ -0.87
SEMA3A-205ENST00000448879 NEUROD4Q9HD90 331 aa9.61□□□□□ -0.87
SEMA3A-205ENST00000448879 SCHIP1Q9P0W5 487 aaPredicted RBP9.61□□□□□ -0.87
SEMA3A-205ENST00000448879 PRR12Q9ULL5 1215 aa9.61□□□□□ -0.87
SEMA3A-205ENST00000448879 PIK3R2O00459 728 aa9.6□□□□□ -0.87
SEMA3A-205ENST00000448879 ATP1A2P50993 1020 aa9.6□□□□□ -0.87
SEMA3A-205ENST00000448879 TNP2Q05952 138 aa9.6□□□□□ -0.87
SEMA3A-205ENST00000448879 TBCELQ5QJ74 424 aa9.6□□□□□ -0.87
SEMA3A-205ENST00000448879 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
SEMA3A-205ENST00000448879 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 EPXP11678 715 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 ADH6P28332 368 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 TXLNAP40222 546 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 GRIN2CQ14957 1233 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 SLC9A9Q8IVB4 645 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 TPCN2Q8NHX9 752 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 L3MBTL2Q969R5 705 aa9.59□□□□□ -0.87
SEMA3A-205ENST00000448879 FAM157BP0CG42 384 aa9.58□□□□□ -0.88
SEMA3A-205ENST00000448879 TNS4Q8IZW8 715 aa9.58□□□□□ -0.88
SEMA3A-205ENST00000448879 BTBD6Q96KE9 485 aa9.58□□□□□ -0.88
SEMA3A-205ENST00000448879 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
SEMA3A-205ENST00000448879 RBM19Q9Y4C8 960 aaKnown RBP9.58□□□□□ -0.88
SEMA3A-205ENST00000448879 NOS2P35228 1153 aa9.57□□□□□ -0.88
SEMA3A-205ENST00000448879 FAM182BQ5T319 152 aa9.57□□□□□ -0.88
SEMA3A-205ENST00000448879 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
SEMA3A-205ENST00000448879 ZDHHC1Q8WTX9 485 aa9.57□□□□□ -0.88
SEMA3A-205ENST00000448879 SPOCK3Q9BQ16 436 aa9.57□□□□□ -0.88
SEMA3A-205ENST00000448879 SERTM1A2A2V5 107 aa9.56□□□□□ -0.88
SEMA3A-205ENST00000448879 ATP9BO43861 1147 aa9.56□□□□□ -0.88
SEMA3A-205ENST00000448879 TEAD4Q15561 434 aa9.56□□□□□ -0.88
SEMA3A-205ENST00000448879 CCDC102BQ68D86 513 aa9.56□□□□□ -0.88
SEMA3A-205ENST00000448879 LRRC69Q6ZNQ3 347 aa9.56□□□□□ -0.88
SEMA3A-205ENST00000448879 PLEKHM2Q8IWE5 1019 aa9.56□□□□□ -0.88
SEMA3A-205ENST00000448879 MARK1Q9P0L2 795 aa9.56□□□□□ -0.88
SEMA3A-205ENST00000448879 GNB5O14775 395 aa9.55□□□□□ -0.88
SEMA3A-205ENST00000448879 PCBP4P57723 403 aaKnown RBP9.55□□□□□ -0.88
SEMA3A-205ENST00000448879 SAMD5Q5TGI4 173 aa9.55□□□□□ -0.88
SEMA3A-205ENST00000448879 ALYREFQ86V81 257 aaKnown RBP9.55□□□□□ -0.88
SEMA3A-205ENST00000448879 CHSY3Q70JA7 882 aa9.54□□□□□ -0.88
SEMA3A-205ENST00000448879 OGFOD1Q8N543 542 aa9.54□□□□□ -0.88
SEMA3A-205ENST00000448879 RHPN1Q8TCX5 695 aa9.54□□□□□ -0.88
SEMA3A-205ENST00000448879 AVENQ9NQS1 362 aaPredicted RBP9.54□□□□□ -0.88
SEMA3A-205ENST00000448879 MKRN1Q9UHC7 482 aaKnown RBP9.54□□□□□ -0.88
SEMA3A-205ENST00000448879 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
SEMA3A-205ENST00000448879 EPHA4P54764 986 aa9.53□□□□□ -0.88
SEMA3A-205ENST00000448879 CLDN10P78369 228 aa9.53□□□□□ -0.88
SEMA3A-205ENST00000448879 LAMC2Q13753 1193 aa9.53□□□□□ -0.88
SEMA3A-205ENST00000448879 ZNF468Q5VIY5 522 aaPredicted RBP9.53□□□□□ -0.88
SEMA3A-205ENST00000448879 UCN2Q96RP3 112 aa9.53□□□□□ -0.88
SEMA3A-205ENST00000448879 SUV39H2Q9H5I1 410 aa9.53□□□□□ -0.88
SEMA3A-205ENST00000448879 NOP53Q9NZM5 478 aaKnown RBP9.53□□□□□ -0.88
SEMA3A-205ENST00000448879 KRBA1A5PL33 1030 aa9.52□□□□□ -0.89
SEMA3A-205ENST00000448879 ITGB2P05107 769 aa9.52□□□□□ -0.89
SEMA3A-205ENST00000448879 COL8A1P27658 744 aa9.52□□□□□ -0.89
SEMA3A-205ENST00000448879 LINC00114Q6XXX2 140 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms