RNA–Protein interactions for RNA: ENST00000448413.5

SUMF1-204, Transcript of sulfatase modifying factor 1, humanhuman

TSL 2

Gene SUMF1, Length 3,150 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-204ENST00000448413 NRXN3Q9Y4C0 1643 aa17.2■□□□□ 0.34
SUMF1-204ENST00000448413 AP5Z1O43299 807 aa17.2■□□□□ 0.34
SUMF1-204ENST00000448413 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
SUMF1-204ENST00000448413 GSPT1P15170 499 aaKnown RBP17.19■□□□□ 0.34
SUMF1-204ENST00000448413 GYS2P54840 703 aa17.19■□□□□ 0.34
SUMF1-204ENST00000448413 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
SUMF1-204ENST00000448413 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
SUMF1-204ENST00000448413 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
SUMF1-204ENST00000448413 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
SUMF1-204ENST00000448413 PTGS1P23219 599 aa17.18■□□□□ 0.34
SUMF1-204ENST00000448413 WDR63Q8IWG1 891 aa17.18■□□□□ 0.34
SUMF1-204ENST00000448413 KCNG1Q9UIX4 513 aa17.18■□□□□ 0.34
SUMF1-204ENST00000448413 LRMPQ12912 555 aa17.18■□□□□ 0.34
SUMF1-204ENST00000448413 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
SUMF1-204ENST00000448413 RAD51AP2Q09MP3 1159 aa17.18■□□□□ 0.34
SUMF1-204ENST00000448413 USP48Q86UV5 1035 aa17.18■□□□□ 0.34
SUMF1-204ENST00000448413 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
SUMF1-204ENST00000448413 MAP3K19Q56UN5 1328 aa17.17■□□□□ 0.34
SUMF1-204ENST00000448413 IL13P35225 146 aa17.17■□□□□ 0.34
SUMF1-204ENST00000448413 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
SUMF1-204ENST00000448413 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
SUMF1-204ENST00000448413 GTF3C6Q969F1 213 aa17.17■□□□□ 0.34
SUMF1-204ENST00000448413 MORC2Q9Y6X9 1032 aaPredicted RBP17.17■□□□□ 0.34
SUMF1-204ENST00000448413 EDC4Q6P2E9 1401 aaKnown RBP17.16■□□□□ 0.34
SUMF1-204ENST00000448413 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
SUMF1-204ENST00000448413 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
SUMF1-204ENST00000448413 NEK4P51957 841 aa17.16■□□□□ 0.34
SUMF1-204ENST00000448413 C10orf67Q8IYJ2 551 aa17.16■□□□□ 0.34
SUMF1-204ENST00000448413 KDM4AO75164 1064 aa17.16■□□□□ 0.34
SUMF1-204ENST00000448413 FCHSD2O94868 740 aa17.16■□□□□ 0.34
SUMF1-204ENST00000448413 TNNT1P13805 278 aa17.15■□□□□ 0.34
SUMF1-204ENST00000448413 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
SUMF1-204ENST00000448413 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
SUMF1-204ENST00000448413 DRC7Q8IY82 874 aa17.15■□□□□ 0.34
SUMF1-204ENST00000448413 NEK11Q8NG66 645 aa17.15■□□□□ 0.34
SUMF1-204ENST00000448413 ATP7BP35670 1465 aa17.14■□□□□ 0.34
SUMF1-204ENST00000448413 PLEKHG3A1L390 1219 aa17.14■□□□□ 0.33
SUMF1-204ENST00000448413 GPATCH11Q8N954 259 aa17.14■□□□□ 0.33
SUMF1-204ENST00000448413 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
SUMF1-204ENST00000448413 TRIM66O15016 1216 aa17.14■□□□□ 0.33
SUMF1-204ENST00000448413 PHF14O94880 888 aa17.14■□□□□ 0.33
SUMF1-204ENST00000448413 KMT5BQ4FZB7 885 aa17.14■□□□□ 0.33
SUMF1-204ENST00000448413 CCDC112Q8NEF3 446 aa17.14■□□□□ 0.33
SUMF1-204ENST00000448413 CABLES1Q8TDN4 633 aa17.14■□□□□ 0.33
SUMF1-204ENST00000448413 GTF2A1P52655 376 aaPredicted RBP17.14■□□□□ 0.33
SUMF1-204ENST00000448413 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
SUMF1-204ENST00000448413 CHMP3Q9Y3E7 222 aa17.13■□□□□ 0.33
SUMF1-204ENST00000448413 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
SUMF1-204ENST00000448413 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
SUMF1-204ENST00000448413 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
SUMF1-204ENST00000448413 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
SUMF1-204ENST00000448413 NOL10Q9BSC4 688 aaKnown RBP17.12■□□□□ 0.33
SUMF1-204ENST00000448413 POLR3GO15318 223 aaPredicted RBP17.12■□□□□ 0.33
SUMF1-204ENST00000448413 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
SUMF1-204ENST00000448413 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
SUMF1-204ENST00000448413 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
SUMF1-204ENST00000448413 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
SUMF1-204ENST00000448413 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
SUMF1-204ENST00000448413 CNPY4Q8N129 248 aa17.11■□□□□ 0.33
SUMF1-204ENST00000448413 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
SUMF1-204ENST00000448413 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.11■□□□□ 0.33
SUMF1-204ENST00000448413 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
SUMF1-204ENST00000448413 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
SUMF1-204ENST00000448413 ATF3P18847 181 aa17.1■□□□□ 0.33
SUMF1-204ENST00000448413 TPD52L1Q16890 204 aaPredicted RBP17.1■□□□□ 0.33
SUMF1-204ENST00000448413 USP6P35125 1406 aa17.1■□□□□ 0.33
SUMF1-204ENST00000448413 BRD1O95696 1058 aa17.1■□□□□ 0.33
SUMF1-204ENST00000448413 ELF2Q15723 593 aa17.1■□□□□ 0.33
SUMF1-204ENST00000448413 FIBPO43427 364 aa17.09■□□□□ 0.33
SUMF1-204ENST00000448413 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
SUMF1-204ENST00000448413 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
SUMF1-204ENST00000448413 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
SUMF1-204ENST00000448413 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
SUMF1-204ENST00000448413 SMTNL1A8MU46 457 aa17.09■□□□□ 0.33
SUMF1-204ENST00000448413 ZNF215Q9UL58 517 aaPredicted RBP17.09■□□□□ 0.33
SUMF1-204ENST00000448413 CCDC183Q5T5S1 534 aa17.08■□□□□ 0.33
SUMF1-204ENST00000448413 FBXO38Q6PIJ6 1188 aa17.08■□□□□ 0.33
SUMF1-204ENST00000448413 PLEKHM2Q8IWE5 1019 aa17.08■□□□□ 0.33
SUMF1-204ENST00000448413 RBM6P78332 1123 aaKnown RBP17.08■□□□□ 0.32
SUMF1-204ENST00000448413 EYA1Q99502 592 aa17.08■□□□□ 0.32
SUMF1-204ENST00000448413 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
SUMF1-204ENST00000448413 SYT10Q6XYQ8 523 aa17.08■□□□□ 0.32
SUMF1-204ENST00000448413 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
SUMF1-204ENST00000448413 TSPYL1Q9H0U9 437 aa17.08■□□□□ 0.32
SUMF1-204ENST00000448413 RASSF4Q9H2L5 321 aa17.07■□□□□ 0.32
SUMF1-204ENST00000448413 LCMT1Q9UIC8 334 aa17.07■□□□□ 0.32
SUMF1-204ENST00000448413 TECPR2O15040 1411 aa17.07■□□□□ 0.32
SUMF1-204ENST00000448413 DHX16O60231 1041 aaKnown RBP17.07■□□□□ 0.32
SUMF1-204ENST00000448413 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
SUMF1-204ENST00000448413 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
SUMF1-204ENST00000448413 PSEN1P49768 467 aa17.06■□□□□ 0.32
SUMF1-204ENST00000448413 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
SUMF1-204ENST00000448413 MBIPQ9NS73 344 aa17.06■□□□□ 0.32
SUMF1-204ENST00000448413 TCHHQ07283 1943 aa17.06■□□□□ 0.32
SUMF1-204ENST00000448413 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
SUMF1-204ENST00000448413 ZNF397Q8NF99 534 aaPredicted RBP17.06■□□□□ 0.32
SUMF1-204ENST00000448413 NPHP4O75161 1426 aaPredicted RBP17.06■□□□□ 0.32
SUMF1-204ENST00000448413 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
SUMF1-204ENST00000448413 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
SUMF1-204ENST00000448413 SDSP20132 328 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms