RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 UBE2HP62256 183 aa24.61■■□□□ 1.53
SMARCD2-203ENST00000448276 RUFY3Q7L099 469 aa24.61■■□□□ 1.53
SMARCD2-203ENST00000448276 CHMP3Q9Y3E7 222 aa24.61■■□□□ 1.53
SMARCD2-203ENST00000448276 NUTM2FA1L443 756 aa24.6■■□□□ 1.53
SMARCD2-203ENST00000448276 IGSF3O75054 1194 aa24.6■■□□□ 1.53
SMARCD2-203ENST00000448276 ATP8B2P98198 1209 aa24.6■■□□□ 1.53
SMARCD2-203ENST00000448276 SNX14Q9Y5W7 946 aa24.6■■□□□ 1.53
SMARCD2-203ENST00000448276 DNM1Q05193 864 aaKnown RBP24.6■■□□□ 1.53
SMARCD2-203ENST00000448276 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
SMARCD2-203ENST00000448276 CRB1P82279 1406 aa24.6■■□□□ 1.53
SMARCD2-203ENST00000448276 DDX54Q8TDD1 881 aaKnown RBP24.59■■□□□ 1.53
SMARCD2-203ENST00000448276 F13A1P00488 732 aa24.58■■□□□ 1.53
SMARCD2-203ENST00000448276 KIAA1524Q8TCG1 905 aa24.58■■□□□ 1.53
SMARCD2-203ENST00000448276 FUCA2Q9BTY2 467 aa24.58■■□□□ 1.53
SMARCD2-203ENST00000448276 STAP2Q9UGK3 403 aa24.58■■□□□ 1.53
SMARCD2-203ENST00000448276 U2AF2P26368 475 aaKnown RBP eCLIP24.57■■□□□ 1.52
SMARCD2-203ENST00000448276 SPG7Q9UQ90 795 aa24.57■■□□□ 1.52
SMARCD2-203ENST00000448276 PLEKHG5O94827 1062 aa24.57■■□□□ 1.52
SMARCD2-203ENST00000448276 MTHFSDQ2M296 383 aaKnown RBP24.57■■□□□ 1.52
SMARCD2-203ENST00000448276 SMC3Q9UQE7 1217 aa24.57■■□□□ 1.52
SMARCD2-203ENST00000448276 FLIIQ13045 1269 aa24.56■■□□□ 1.52
SMARCD2-203ENST00000448276 PDCL2Q8N4E4 241 aa24.56■■□□□ 1.52
SMARCD2-203ENST00000448276 CCDC83Q8IWF9 413 aa24.56■■□□□ 1.52
SMARCD2-203ENST00000448276 TTC14Q96N46 770 aa24.56■■□□□ 1.52
SMARCD2-203ENST00000448276 A2ML1A8K2U0 1454 aa24.56■■□□□ 1.52
SMARCD2-203ENST00000448276 UTP14CQ5TAP6 766 aaKnown RBP24.55■■□□□ 1.52
SMARCD2-203ENST00000448276 BCL11BQ9C0K0 894 aaPredicted RBP24.55■■□□□ 1.52
SMARCD2-203ENST00000448276 A0A0U1RQG5 324 aaPredicted RBP24.55■■□□□ 1.52
SMARCD2-203ENST00000448276 STK31Q9BXU1 1019 aa24.55■■□□□ 1.52
SMARCD2-203ENST00000448276 CCDC61Q9Y6R9 512 aa24.55■■□□□ 1.52
SMARCD2-203ENST00000448276 SSH2Q76I76 1423 aa24.55■■□□□ 1.52
SMARCD2-203ENST00000448276 LETM1O95202 739 aaPredicted RBP24.55■■□□□ 1.52
SMARCD2-203ENST00000448276 CWC27Q6UX04 472 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-203ENST00000448276 PODXL2Q9NZ53 605 aa24.54■■□□□ 1.52
SMARCD2-203ENST00000448276 GNAI3P08754 354 aa24.54■■□□□ 1.52
SMARCD2-203ENST00000448276 RTF1Q92541 710 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-203ENST00000448276 LIMCH1Q9UPQ0 1083 aa24.54■■□□□ 1.52
SMARCD2-203ENST00000448276 CAMK4Q16566 473 aa24.53■■□□□ 1.52
SMARCD2-203ENST00000448276 TUBGCP6Q96RT7 1819 aa24.53■■□□□ 1.52
SMARCD2-203ENST00000448276 CASTP20810 708 aaKnown RBP24.53■■□□□ 1.52
SMARCD2-203ENST00000448276 PTGS1P23219 599 aa24.53■■□□□ 1.52
SMARCD2-203ENST00000448276 GJB2P29033 226 aa24.53■■□□□ 1.52
SMARCD2-203ENST00000448276 IL17RAQ96F46 866 aa24.53■■□□□ 1.52
SMARCD2-203ENST00000448276 RAD50Q92878 1312 aa24.52■■□□□ 1.52
SMARCD2-203ENST00000448276 VPS37CA5D8V6 355 aaPredicted RBP24.52■■□□□ 1.52
SMARCD2-203ENST00000448276 SGSM2O43147 1006 aa24.52■■□□□ 1.52
SMARCD2-203ENST00000448276 LSG1Q9H089 658 aaKnown RBP24.52■■□□□ 1.52
SMARCD2-203ENST00000448276 AGLP35573 1532 aa24.52■■□□□ 1.52
SMARCD2-203ENST00000448276 MAP3K19Q56UN5 1328 aa24.52■■□□□ 1.52
SMARCD2-203ENST00000448276 SURF6O75683 361 aaKnown RBP24.51■■□□□ 1.51
SMARCD2-203ENST00000448276 FAM173BQ6P4H8 233 aa24.51■■□□□ 1.51
SMARCD2-203ENST00000448276 PRR36Q9H6K5 1346 aa24.51■■□□□ 1.51
SMARCD2-203ENST00000448276 USP44Q9H0E7 712 aa24.51■■□□□ 1.51
SMARCD2-203ENST00000448276 PI4K2BQ8TCG2 481 aa24.5■■□□□ 1.51
SMARCD2-203ENST00000448276 MTMR6Q9Y217 621 aa24.5■■□□□ 1.51
SMARCD2-203ENST00000448276 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.5■■□□□ 1.51
SMARCD2-203ENST00000448276 ADCK5Q3MIX3 580 aa24.49■■□□□ 1.51
SMARCD2-203ENST00000448276 LUZP1Q86V48 1076 aa24.49■■□□□ 1.51
SMARCD2-203ENST00000448276 METP08581 1390 aa24.49■■□□□ 1.51
SMARCD2-203ENST00000448276 LRMPQ12912 555 aa24.49■■□□□ 1.51
SMARCD2-203ENST00000448276 CHAF1AQ13111 956 aaPredicted RBP24.49■■□□□ 1.51
SMARCD2-203ENST00000448276 NECAB1Q8N987 351 aa24.49■■□□□ 1.51
SMARCD2-203ENST00000448276 FERMT3Q86UX7 667 aa24.48■■□□□ 1.51
SMARCD2-203ENST00000448276 UBTFL1P0CB47 393 aaPredicted RBP24.48■■□□□ 1.51
SMARCD2-203ENST00000448276 PPP1R42Q7Z4L9 355 aa24.48■■□□□ 1.51
SMARCD2-203ENST00000448276 DIAPH3Q9NSV4 1193 aa24.48■■□□□ 1.51
SMARCD2-203ENST00000448276 NRBP1Q9UHY1 535 aa24.48■■□□□ 1.51
SMARCD2-203ENST00000448276 NAA30Q147X3 362 aaPredicted RBP24.47■■□□□ 1.51
SMARCD2-203ENST00000448276 HYPKQ9NX55 129 aa24.47■■□□□ 1.51
SMARCD2-203ENST00000448276 CKAP2LQ8IYA6 745 aa24.47■■□□□ 1.51
SMARCD2-203ENST00000448276 PTH1RQ03431 593 aa24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 COL9A3Q14050 684 aaPredicted RBP24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 RIMS1Q86UR5 1692 aaKnown RBP24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 SOS1Q07889 1333 aaPredicted RBP24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 LIG1P18858 919 aa24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 ST3GAL1Q11201 340 aa24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 ANKRD7Q92527 254 aa24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 C16orf45Q96MC5 204 aaPredicted RBP24.46■■□□□ 1.51
SMARCD2-203ENST00000448276 SPATA31D1Q6ZQQ2 1576 aa24.45■■□□□ 1.51
SMARCD2-203ENST00000448276 TTC21BQ7Z4L5 1316 aa24.45■■□□□ 1.5
SMARCD2-203ENST00000448276 RHPN1Q8TCX5 695 aa24.45■■□□□ 1.5
SMARCD2-203ENST00000448276 JAKMIP1Q96N16 626 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-203ENST00000448276 DLC1Q96QB1 1528 aa24.45■■□□□ 1.5
SMARCD2-203ENST00000448276 CCDC192P0DO97 292 aa24.45■■□□□ 1.5
SMARCD2-203ENST00000448276 PHAXQ9H814 394 aaKnown RBP24.45■■□□□ 1.5
SMARCD2-203ENST00000448276 ATP6V1DQ9Y5K8 247 aa24.45■■□□□ 1.5
SMARCD2-203ENST00000448276 PRPF40BQ6NWY9 871 aaKnown RBP24.44■■□□□ 1.5
SMARCD2-203ENST00000448276 CCDC186Q7Z3E2 898 aa24.44■■□□□ 1.5
SMARCD2-203ENST00000448276 GTPBP4Q9BZE4 634 aaKnown RBP24.44■■□□□ 1.5
SMARCD2-203ENST00000448276 CCDC30Q5VVM6 783 aa24.44■■□□□ 1.5
SMARCD2-203ENST00000448276 TTC6Q86TZ1 520 aa24.43■■□□□ 1.5
SMARCD2-203ENST00000448276 PDRG1Q9NUG6 133 aa24.43■■□□□ 1.5
SMARCD2-203ENST00000448276 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
SMARCD2-203ENST00000448276 MRVI1Q9Y6F6 885 aa24.43■■□□□ 1.5
SMARCD2-203ENST00000448276 DRC7Q8IY82 874 aa24.42■■□□□ 1.5
SMARCD2-203ENST00000448276 SSH3Q8TE77 659 aa24.42■■□□□ 1.5
SMARCD2-203ENST00000448276 ME3Q16798 604 aa24.42■■□□□ 1.5
SMARCD2-203ENST00000448276 SRGAP3O43295 1099 aa24.41■■□□□ 1.5
SMARCD2-203ENST00000448276 CTIFO43310 598 aaKnown RBP24.41■■□□□ 1.5
SMARCD2-203ENST00000448276 NCBP1Q09161 790 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms