RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TRIM35Q9UPQ4 493 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 MYCBPQ99417 103 aaPredicted RBP10.8□□□□□ -0.68
SMC6-207ENST00000448223 MBIPQ9NS73 344 aa10.8□□□□□ -0.68
SMC6-207ENST00000448223 ANKRD18AQ8IVF6 992 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 HSPA4P34932 840 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 SUDS3Q9H7L9 328 aaPredicted RBP10.79□□□□□ -0.68
SMC6-207ENST00000448223 ZNHIT6Q9NWK9 470 aaKnown RBP10.79□□□□□ -0.68
SMC6-207ENST00000448223 SWAP70Q9UH65 585 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 ADGRL1O94910 1474 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 CBFA2T2O43439 604 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 NUP133Q8WUM0 1156 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 FANCAO15360 1455 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 PDCP20941 246 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 NFE2L2Q16236 605 aa10.79□□□□□ -0.68
SMC6-207ENST00000448223 PTPRTO14522 1441 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 HDAC1Q13547 482 aaPredicted RBP10.78□□□□□ -0.68
SMC6-207ENST00000448223 ZNF622Q969S3 477 aaKnown RBP eCLIP10.78□□□□□ -0.683e-7■■■□□ 19.1
SMC6-207ENST00000448223 DRC1Q96MC2 740 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 FEZ1Q99689 392 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 ZBTB40Q9NUA8 1239 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 GCC1Q96CN9 775 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 FCHSD2O94868 740 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 CCDC175P0C221 793 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 BRPF1P55201 1214 aaPredicted RBP10.78□□□□□ -0.68
SMC6-207ENST00000448223 NAA25Q14CX7 972 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 PAXBP1Q9Y5B6 917 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 TRPM2O94759 1503 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 ARID4AP29374 1257 aaPredicted RBP10.78□□□□□ -0.68
SMC6-207ENST00000448223 NUCB1Q02818 461 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 CLTCL1P53675 1640 aa10.78□□□□□ -0.68
SMC6-207ENST00000448223 PLXNC1O60486 1568 aa10.77□□□□□ -0.68
SMC6-207ENST00000448223 CD2BP2O95400 341 aaKnown RBP10.77□□□□□ -0.68
SMC6-207ENST00000448223 OGFRQ9NZT2 677 aa10.77□□□□□ -0.68
SMC6-207ENST00000448223 RSRC1Q96IZ7 334 aaKnown RBP10.77□□□□□ -0.69
SMC6-207ENST00000448223 WDR33Q9C0J8 1336 aaKnown RBP10.77□□□□□ -0.69
SMC6-207ENST00000448223 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
SMC6-207ENST00000448223 ZSCAN12O43309 604 aa10.77□□□□□ -0.69
SMC6-207ENST00000448223 LRCH2Q5VUJ6 765 aa10.77□□□□□ -0.69
SMC6-207ENST00000448223 CLASP1Q7Z460 1538 aa10.77□□□□□ -0.69
SMC6-207ENST00000448223 ARHGAP29Q52LW3 1261 aa10.77□□□□□ -0.69
SMC6-207ENST00000448223 CCDC148Q8NFR7 591 aa10.77□□□□□ -0.69
SMC6-207ENST00000448223 FAM114A1Q8IWE2 563 aa10.76□□□□□ -0.69
SMC6-207ENST00000448223 CEP63Q96MT8 703 aa10.76□□□□□ -0.69
SMC6-207ENST00000448223 BCCIPQ9P287 314 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMC6-207ENST00000448223 SFPQP23246 707 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMC6-207ENST00000448223 CEP83Q9Y592 693 aa10.76□□□□□ -0.69
SMC6-207ENST00000448223 PIP4K2AP48426 406 aaPredicted RBP10.76□□□□□ -0.69
SMC6-207ENST00000448223 FOSBP53539 338 aa10.76□□□□□ -0.69
SMC6-207ENST00000448223 ZGPATQ8N5A5 531 aaKnown RBP10.76□□□□□ -0.69
SMC6-207ENST00000448223 MEIS3Q99687 375 aa10.76□□□□□ -0.69
SMC6-207ENST00000448223 LUC7LQ9NQ29 371 aaKnown RBP10.76□□□□□ -0.69
SMC6-207ENST00000448223 CAPN2P17655 700 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 DAAM2Q86T65 1068 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 SMC5Q8IY18 1101 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 CEP57L1Q8IYX8 460 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 ERCC6L2Q5T890 1561 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 SMC1AQ14683 1233 aaKnown RBP10.75□□□□□ -0.69
SMC6-207ENST00000448223 POLKQ9UBT6 870 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 A0A1W2PP64 1363 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 CASQ1P31415 396 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 MAP2K2P36507 400 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 SAFBQ15424 915 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMC6-207ENST00000448223 GAS2L3Q86XJ1 694 aa10.75□□□□□ -0.69
SMC6-207ENST00000448223 RNF168Q8IYW5 571 aaPredicted RBP10.75□□□□□ -0.69
SMC6-207ENST00000448223 FAM69CQ0P6D2 419 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 SPECC1LQ69YQ0 1117 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 NUP62CLQ9H1M0 184 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 VAMP4O75379 141 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 BAG4O95429 457 aaKnown RBP10.74□□□□□ -0.69
SMC6-207ENST00000448223 VPS53Q5VIR6 699 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 ANKRD36BQ8N2N9 1353 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 BMP2KLQ5H9B9 411 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 ZFYVE27Q5T4F4 411 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 TMX4Q9H1E5 349 aaPredicted RBP10.74□□□□□ -0.69
SMC6-207ENST00000448223 RTEL1-TNFRSF6BF6WH68 1400 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 NEMFO60524 1076 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 SURF6O75683 361 aaKnown RBP10.74□□□□□ -0.69
SMC6-207ENST00000448223 PKP1Q13835 747 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 ABCC1P33527 1531 aa10.74□□□□□ -0.69
SMC6-207ENST00000448223 RNF17Q9BXT8 1623 aaKnown RBP10.74□□□□□ -0.69
SMC6-207ENST00000448223 EBAG9O00559 213 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 EPS15P42566 896 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 KRT85P78386 507 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 AP1ARQ63HQ0 302 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
SMC6-207ENST00000448223 USP25Q9UHP3 1055 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 TXLNAP40222 546 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 TMX1Q9H3N1 280 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 GOLGA6L9A6NEM1 432 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 EPB41L2O43491 1005 aaKnown RBP10.73□□□□□ -0.69
SMC6-207ENST00000448223 FOXO3O43524 673 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 KIF4BQ2VIQ3 1234 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 NUDT16Q96DE0 195 aaKnown RBP10.73□□□□□ -0.69
SMC6-207ENST00000448223 KIF5BP33176 963 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 FMNL3Q8IVF7 1028 aa10.73□□□□□ -0.69
SMC6-207ENST00000448223 MAGEC2Q9UBF1 373 aaPredicted RBP10.73□□□□□ -0.69
SMC6-207ENST00000448223 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
SMC6-207ENST00000448223 ATP7AQ04656 1500 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms