RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 SETDB2Q96T68 719 aa9.76□□□□□ -0.85
COL11A1-205ENST00000447608 PSMA6P60900 246 aaKnown RBP9.75□□□□□ -0.85
COL11A1-205ENST00000447608 PPP1R26Q5T8A7 1209 aaPredicted RBP9.75□□□□□ -0.85
COL11A1-205ENST00000447608 MRS2Q9HD23 443 aa9.75□□□□□ -0.85
COL11A1-205ENST00000447608 USP3Q9Y6I4 520 aa9.75□□□□□ -0.85
COL11A1-205ENST00000447608 TLL2Q9Y6L7 1015 aa9.75□□□□□ -0.85
COL11A1-205ENST00000447608 FGD1P98174 961 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 PDE3BQ13370 1112 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 RC3H1Q5TC82 1133 aaKnown RBP9.74□□□□□ -0.85
COL11A1-205ENST00000447608 TMC4Q7Z404 712 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 CCDC116Q8IYX3 515 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 ABTB2Q8N961 1025 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 ANKLE1Q8NAG6 615 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 NGLY1Q96IV0 654 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 PUS7Q96PZ0 661 aaKnown RBP9.74□□□□□ -0.85
COL11A1-205ENST00000447608 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 ARHGEF10LQ9HCE6 1279 aa9.74□□□□□ -0.85
COL11A1-205ENST00000447608 SORBS3O60504 671 aa9.73□□□□□ -0.85
COL11A1-205ENST00000447608 DAB2P98082 770 aa9.73□□□□□ -0.85
COL11A1-205ENST00000447608 RAD51AP2Q09MP3 1159 aa9.73□□□□□ -0.85
COL11A1-205ENST00000447608 SF3A1Q15459 793 aaKnown RBP9.73□□□□□ -0.85
COL11A1-205ENST00000447608 PIK3R5Q8WYR1 880 aa9.73□□□□□ -0.85
COL11A1-205ENST00000447608 UBXN4Q92575 508 aa9.73□□□□□ -0.85
COL11A1-205ENST00000447608 XAGE2Q96GT9 111 aa9.73□□□□□ -0.85
COL11A1-205ENST00000447608 MYO19Q96H55 970 aa9.73□□□□□ -0.85
COL11A1-205ENST00000447608 CDK2AP1O14519 115 aa9.72□□□□□ -0.85
COL11A1-205ENST00000447608 IL2RAP01589 272 aa9.72□□□□□ -0.85
COL11A1-205ENST00000447608 BRD2P25440 801 aaKnown RBP9.72□□□□□ -0.85
COL11A1-205ENST00000447608 PSMD2Q13200 908 aa9.72□□□□□ -0.85
COL11A1-205ENST00000447608 METTL16Q86W50 562 aaKnown RBP9.72□□□□□ -0.85
COL11A1-205ENST00000447608 ALKBH8Q96BT7 664 aaKnown RBP9.72□□□□□ -0.85
COL11A1-205ENST00000447608 VTI1BQ9UEU0 232 aa9.72□□□□□ -0.85
COL11A1-205ENST00000447608 POLIQ9UNA4 740 aa9.72□□□□□ -0.85
COL11A1-205ENST00000447608 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
COL11A1-205ENST00000447608 ATP2B2Q01814 1243 aa9.71□□□□□ -0.86
COL11A1-205ENST00000447608 TLR1Q15399 786 aa9.71□□□□□ -0.86
COL11A1-205ENST00000447608 SH3PXD2AQ5TCZ1 1133 aa9.71□□□□□ -0.86
COL11A1-205ENST00000447608 NT5DC4Q86YG4 428 aa9.71□□□□□ -0.86
COL11A1-205ENST00000447608 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.86
COL11A1-205ENST00000447608 ADH1CP00326 375 aa9.7□□□□□ -0.86
COL11A1-205ENST00000447608 HMGB1P09429 215 aaKnown RBP9.7□□□□□ -0.86
COL11A1-205ENST00000447608 RPIAP49247 311 aa9.7□□□□□ -0.86
COL11A1-205ENST00000447608 DNM1Q05193 864 aaKnown RBP9.7□□□□□ -0.86
COL11A1-205ENST00000447608 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
COL11A1-205ENST00000447608 MPNDQ8N594 471 aa9.7□□□□□ -0.86
COL11A1-205ENST00000447608 CNKSR1Q969H4 720 aa9.7□□□□□ -0.86
COL11A1-205ENST00000447608 PNMA6FA0A0J9YX94 578 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 SERTM1A2A2V5 107 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 EML1O00423 815 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 SIAH2O43255 324 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 NR3C2P08235 984 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 HSP90B1P14625 803 aaKnown RBP9.69□□□□□ -0.86
COL11A1-205ENST00000447608 NR5A1Q13285 461 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 POTEAQ6S8J7 498 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 ETFBKMTQ8IXQ9 262 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 GJD3Q8N144 294 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 HCN4Q9Y3Q4 1203 aa9.69□□□□□ -0.86
COL11A1-205ENST00000447608 MZF1P28698 734 aaPredicted RBP9.68□□□□□ -0.86
COL11A1-205ENST00000447608 FANCCQ00597 558 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 KCNC4Q03721 635 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 ALDH16A1Q8IZ83 802 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 ZDHHC1Q8WTX9 485 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 EDEM1Q92611 657 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 RNF34Q969K3 372 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 ZNF232Q9UNY5 417 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 HRH3Q9Y5N1 445 aa9.68□□□□□ -0.86
COL11A1-205ENST00000447608 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
COL11A1-205ENST00000447608 NOS2P35228 1153 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 GGCXP38435 758 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 ITGAEP38570 1179 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 DGKZQ13574 1117 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 TEAD4Q15561 434 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 C11orf91Q3C1V1 193 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 ALG1LQ6GMV1 187 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 ESYT1Q9BSJ8 1104 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 KLK14Q9P0G3 267 aa9.67□□□□□ -0.86
COL11A1-205ENST00000447608 PDGFAP04085 211 aa9.66□□□□□ -0.86
COL11A1-205ENST00000447608 ZAP70P43403 619 aa9.66□□□□□ -0.86
COL11A1-205ENST00000447608 METTL5Q9NRN9 209 aaKnown RBP9.66□□□□□ -0.86
COL11A1-205ENST00000447608 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
COL11A1-205ENST00000447608 USP5P45974 858 aa9.65□□□□□ -0.86
COL11A1-205ENST00000447608 HIRAP54198 1017 aaPredicted RBP9.65□□□□□ -0.86
COL11A1-205ENST00000447608 L3MBTL2Q969R5 705 aa9.65□□□□□ -0.86
COL11A1-205ENST00000447608 IFT43Q96FT9 208 aa9.65□□□□□ -0.86
COL11A1-205ENST00000447608 CFHR5Q9BXR6 569 aa9.65□□□□□ -0.86
COL11A1-205ENST00000447608 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
COL11A1-205ENST00000447608 SMARCA5O60264 1052 aaPredicted RBP9.64□□□□□ -0.87
COL11A1-205ENST00000447608 ZNF76P36508 570 aa9.64□□□□□ -0.87
COL11A1-205ENST00000447608 RTN1Q16799 776 aa9.64□□□□□ -0.87
COL11A1-205ENST00000447608 NBPF15Q8N660 670 aa9.64□□□□□ -0.87
COL11A1-205ENST00000447608 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
COL11A1-205ENST00000447608 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
COL11A1-205ENST00000447608 FHDC1Q9C0D6 1143 aaPredicted RBP9.64□□□□□ -0.87
COL11A1-205ENST00000447608 TGIF2Q9GZN2 237 aa9.64□□□□□ -0.87
COL11A1-205ENST00000447608 EMILIN1Q9Y6C2 1016 aa9.64□□□□□ -0.87
COL11A1-205ENST00000447608 ADH1AP07327 375 aa9.63□□□□□ -0.87
COL11A1-205ENST00000447608 GNA15P30679 374 aa9.63□□□□□ -0.87
COL11A1-205ENST00000447608 CENPCQ03188 943 aa9.63□□□□□ -0.87
COL11A1-205ENST00000447608 CLN3Q13286 438 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms