RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
SDCBP-205ENST00000447267 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
SDCBP-205ENST00000447267 CABLES1Q8TDN4 633 aa8.35□□□□□ -1.07
SDCBP-205ENST00000447267 LIMD1Q9UGP4 676 aa8.35□□□□□ -1.07
SDCBP-205ENST00000447267 CHD4Q14839 1912 aa8.35□□□□□ -1.07
SDCBP-205ENST00000447267 TTC24A2A3L6 582 aaPredicted RBP8.34□□□□□ -1.07
SDCBP-205ENST00000447267 CCNYL3P0C7X3 344 aa8.34□□□□□ -1.07
SDCBP-205ENST00000447267 WNT7BP56706 349 aa8.34□□□□□ -1.07
SDCBP-205ENST00000447267 PTPRNQ16849 979 aa8.34□□□□□ -1.07
SDCBP-205ENST00000447267 KLRG1Q96E93 195 aa8.34□□□□□ -1.07
SDCBP-205ENST00000447267 TNS2Q63HR2 1409 aa8.34□□□□□ -1.07
SDCBP-205ENST00000447267 SPHKAPQ2M3C7 1700 aa8.34□□□□□ -1.07
SDCBP-205ENST00000447267 SIAH2O43255 324 aa8.33□□□□□ -1.08
SDCBP-205ENST00000447267 GJA5P36382 358 aa8.33□□□□□ -1.08
SDCBP-205ENST00000447267 SH3BP2P78314 561 aa8.33□□□□□ -1.08
SDCBP-205ENST00000447267 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
SDCBP-205ENST00000447267 HPS1Q92902 700 aa8.33□□□□□ -1.08
SDCBP-205ENST00000447267 EVA1BQ9NVM1 165 aa8.33□□□□□ -1.08
SDCBP-205ENST00000447267 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-205ENST00000447267 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
SDCBP-205ENST00000447267 GMPR2Q9P2T1 348 aaKnown RBP8.32□□□□□ -1.08
SDCBP-205ENST00000447267 CFAP65Q6ZU64 1925 aaKnown RBP8.31□□□□□ -1.08
SDCBP-205ENST00000447267 ADGRL3Q9HAR2 1447 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 EFCAB6Q5THR3 1501 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 QPCTQ16769 361 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 CSPP1Q1MSJ5 1256 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 PIK3C2BO00750 1634 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 PLEKHG1Q9ULL1 1385 aa8.31□□□□□ -1.08
SDCBP-205ENST00000447267 CHD2O14647 1828 aaKnown RBP8.31□□□□□ -1.08
SDCBP-205ENST00000447267 MYOM1P52179 1685 aa8.3□□□□□ -1.08
SDCBP-205ENST00000447267 PTPRUQ92729 1446 aa8.3□□□□□ -1.08
SDCBP-205ENST00000447267 AXIN1O15169 862 aa8.3□□□□□ -1.08
SDCBP-205ENST00000447267 PER1O15534 1290 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-205ENST00000447267 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
SDCBP-205ENST00000447267 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
SDCBP-205ENST00000447267 FAM196AQ6ZSG2 479 aa8.3□□□□□ -1.08
SDCBP-205ENST00000447267 BAP1Q92560 729 aa8.3□□□□□ -1.08
SDCBP-205ENST00000447267 DCCP43146 1447 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 SPDYE5A6NIY4 337 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 HSPA1AP0DMV8 641 aaKnown RBP8.29□□□□□ -1.08
SDCBP-205ENST00000447267 HSPA1BP0DMV9 641 aaKnown RBP8.29□□□□□ -1.08
SDCBP-205ENST00000447267 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 ARXQ96QS3 562 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 MAP10Q9P2G4 905 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 C1orf167Q5SNV9 1468 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 PLEKHH2Q8IVE3 1493 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 MBD5Q9P267 1494 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 CDC42BPAQ5VT25 1732 aa8.29□□□□□ -1.08
SDCBP-205ENST00000447267 F12P00748 615 aaPredicted RBP8.28□□□□□ -1.08
SDCBP-205ENST00000447267 YBX3P16989 372 aaKnown RBP eCLIP8.28□□□□□ -1.08
SDCBP-205ENST00000447267 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
SDCBP-205ENST00000447267 RGPD1P0DJD0 1748 aa8.28□□□□□ -1.08
SDCBP-205ENST00000447267 LCE2AQ5TA79 106 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-205ENST00000447267 ZBTB3Q9H5J0 574 aa8.27□□□□□ -1.09
SDCBP-205ENST00000447267 DLC1Q96QB1 1528 aa8.27□□□□□ -1.09
SDCBP-205ENST00000447267 ADAMTS13Q76LX8 1427 aa8.27□□□□□ -1.09
SDCBP-205ENST00000447267 AATKQ6ZMQ8 1374 aa8.26□□□□□ -1.09
SDCBP-205ENST00000447267 FOXO3O43524 673 aa8.26□□□□□ -1.09
SDCBP-205ENST00000447267 LILRB3O75022 631 aa8.26□□□□□ -1.09
SDCBP-205ENST00000447267 ALDH1A1P00352 501 aa8.26□□□□□ -1.09
SDCBP-205ENST00000447267 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
SDCBP-205ENST00000447267 RTL5Q5HYW3 569 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-205ENST00000447267 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
SDCBP-205ENST00000447267 ZNF511Q8NB15 262 aa8.26□□□□□ -1.09
SDCBP-205ENST00000447267 TLL2Q9Y6L7 1015 aa8.26□□□□□ -1.09
SDCBP-205ENST00000447267 TNS1Q9HBL0 1735 aaKnown RBP8.26□□□□□ -1.09
SDCBP-205ENST00000447267 CCNB3Q8WWL7 1395 aa8.25□□□□□ -1.09
SDCBP-205ENST00000447267 MLLT1Q03111 559 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-205ENST00000447267 EHBP1Q8NDI1 1231 aa8.25□□□□□ -1.09
SDCBP-205ENST00000447267 ATP13A2Q9NQ11 1180 aa8.25□□□□□ -1.09
SDCBP-205ENST00000447267 RIMS2Q9UQ26 1411 aa8.25□□□□□ -1.09
SDCBP-205ENST00000447267 LRRIQ1Q96JM4 1722 aa8.25□□□□□ -1.09
SDCBP-205ENST00000447267 TUSC1Q2TAM9 212 aa8.24□□□□□ -1.09
SDCBP-205ENST00000447267 NLGN2Q8NFZ4 835 aa8.24□□□□□ -1.09
SDCBP-205ENST00000447267 FOXJ1Q92949 421 aa8.24□□□□□ -1.09
SDCBP-205ENST00000447267 MTFR1LQ9H019 292 aa8.24□□□□□ -1.09
SDCBP-205ENST00000447267 COL22A1Q8NFW1 1626 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-205ENST00000447267 MTUS2Q5JR59 1369 aa8.23□□□□□ -1.09
SDCBP-205ENST00000447267 NUP188Q5SRE5 1749 aa8.23□□□□□ -1.09
SDCBP-205ENST00000447267 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.23□□□□□ -1.09
SDCBP-205ENST00000447267 ZFYVE9O95405 1425 aa8.23□□□□□ -1.09
SDCBP-205ENST00000447267 NOS1P29475 1434 aa8.23□□□□□ -1.09
SDCBP-205ENST00000447267 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
SDCBP-205ENST00000447267 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
SDCBP-205ENST00000447267 ESCO1Q5FWF5 840 aa8.23□□□□□ -1.09
SDCBP-205ENST00000447267 POLR3EQ9NVU0 708 aa8.23□□□□□ -1.09
SDCBP-205ENST00000447267 GRIN3BO60391 1043 aa8.22□□□□□ -1.09
SDCBP-205ENST00000447267 CTHP32929 405 aa8.22□□□□□ -1.09
SDCBP-205ENST00000447267 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
SDCBP-205ENST00000447267 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
SDCBP-205ENST00000447267 TRPM2O94759 1503 aa8.22□□□□□ -1.09
SDCBP-205ENST00000447267 PIK3R4Q99570 1358 aa8.22□□□□□ -1.09
SDCBP-205ENST00000447267 ARHGAP31Q2M1Z3 1444 aa8.21□□□□□ -1.09
SDCBP-205ENST00000447267 ADGRB3O60242 1522 aa8.21□□□□□ -1.1
SDCBP-205ENST00000447267 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.1
SDCBP-205ENST00000447267 TRIM46Q7Z4K8 759 aa8.21□□□□□ -1.1
SDCBP-205ENST00000447267 FAM117AQ9C073 453 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms