RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZNF827Q17R98 1081 aa5.11□□□□□ -1.59
PMS1-215ENST00000447232 KIAA1210Q9ULL0 1709 aa5.11□□□□□ -1.59
PMS1-215ENST00000447232 ANKARQ7Z5J8 1434 aa5.11□□□□□ -1.59
PMS1-215ENST00000447232 PLCB2Q00722 1185 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 EYA1Q99502 592 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 NUP155O75694 1391 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 AKAP12Q02952 1782 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 TJAP1Q5JTD0 557 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 RBM46Q8TBY0 533 aaKnown RBP5.1□□□□□ -1.59
PMS1-215ENST00000447232 PMFBP1Q8TBY8 1022 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 VPS8Q8N3P4 1428 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 RPGRIP1LQ68CZ1 1315 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 ACIN1Q9UKV3 1341 aaKnown RBP5.1□□□□□ -1.59
PMS1-215ENST00000447232 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 SEMA3EO15041 775 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 EVA1CP58658 441 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 MARCH10Q8NA82 808 aaPredicted RBP5.1□□□□□ -1.59
PMS1-215ENST00000447232 SIRT1Q96EB6 747 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
PMS1-215ENST00000447232 CICQ96RK0 1608 aaPredicted RBP5.09□□□□□ -1.59
PMS1-215ENST00000447232 WNK3Q9BYP7 1800 aa5.09□□□□□ -1.59
PMS1-215ENST00000447232 GPRASP1Q5JY77 1395 aa5.09□□□□□ -1.59
PMS1-215ENST00000447232 COL5A2P05997 1499 aaPredicted RBP5.09□□□□□ -1.59
PMS1-215ENST00000447232 TUBGCP6Q96RT7 1819 aa5.09□□□□□ -1.59
PMS1-215ENST00000447232 CPDO75976 1380 aa5.09□□□□□ -1.6
PMS1-215ENST00000447232 CRB1P82279 1406 aa5.09□□□□□ -1.6
PMS1-215ENST00000447232 ZC3H6P61129 1189 aaKnown RBP5.09□□□□□ -1.6
PMS1-215ENST00000447232 FSTL1Q12841 308 aa5.09□□□□□ -1.6
PMS1-215ENST00000447232 DDB1Q16531 1140 aa5.09□□□□□ -1.6
PMS1-215ENST00000447232 SWT1Q5T5J6 900 aaKnown RBP5.09□□□□□ -1.6
PMS1-215ENST00000447232 STK26Q9P289 416 aa5.09□□□□□ -1.6
PMS1-215ENST00000447232 NHSQ6T4R5 1651 aa5.08□□□□□ -1.6
PMS1-215ENST00000447232 PNPLA7Q6ZV29 1317 aa5.08□□□□□ -1.6
PMS1-215ENST00000447232 RNF40O75150 1001 aa5.08□□□□□ -1.6
PMS1-215ENST00000447232 RGS19P49795 217 aa5.08□□□□□ -1.6
PMS1-215ENST00000447232 BRD4O60885 1362 aaPredicted RBP5.07□□□□□ -1.6
PMS1-215ENST00000447232 YTHDC2Q9H6S0 1430 aaKnown RBP5.07□□□□□ -1.6
PMS1-215ENST00000447232 MTRQ99707 1265 aa5.07□□□□□ -1.6
PMS1-215ENST00000447232 NMRK2Q9NPI5 230 aa5.07□□□□□ -1.6
PMS1-215ENST00000447232 LRRC4BQ9NT99 713 aa5.07□□□□□ -1.6
PMS1-215ENST00000447232 CD2APQ9Y5K6 639 aa5.07□□□□□ -1.6
PMS1-215ENST00000447232 ANKRD30BQ9BXX2 1392 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 MLLT1Q03111 559 aaPredicted RBP5.06□□□□□ -1.6
PMS1-215ENST00000447232 ZNF516Q92618 1163 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 C10orf71Q711Q0 1435 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 BTAF1O14981 1849 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 TMEM132EQ6IEE7 984 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 SLF2Q8IX21 1173 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 IRX2Q9BZI1 471 aaPredicted RBP5.06□□□□□ -1.6
PMS1-215ENST00000447232 IL21Q9HBE4 155 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 PRDM10Q9NQV6 1147 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 ADGRG1Q9Y653 693 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 ADGRF5Q8IZF2 1346 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 PRR36Q9H6K5 1346 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 ROCK1Q13464 1354 aa5.06□□□□□ -1.6
PMS1-215ENST00000447232 USP19O94966 1318 aa5.05□□□□□ -1.6
PMS1-215ENST00000447232 TRPM1Q7Z4N2 1603 aa5.05□□□□□ -1.6
PMS1-215ENST00000447232 CDCA7Q9BWT1 371 aaPredicted RBP5.05□□□□□ -1.6
PMS1-215ENST00000447232 PIK3C2GO75747 1445 aa5.04□□□□□ -1.6
PMS1-215ENST00000447232 TESPA1A2RU30 521 aaPredicted RBP5.04□□□□□ -1.6
PMS1-215ENST00000447232 NECTIN2Q92692 538 aa5.04□□□□□ -1.6
PMS1-215ENST00000447232 ABHD8Q96I13 439 aa5.04□□□□□ -1.6
PMS1-215ENST00000447232 TNRC18O15417 2968 aaPredicted RBP5.04□□□□□ -1.6
PMS1-215ENST00000447232 PXDNLA1KZ92 1463 aa5.04□□□□□ -1.6
PMS1-215ENST00000447232 FCHSD2O94868 740 aa5.04□□□□□ -1.6
PMS1-215ENST00000447232 TMEM134Q9H6X4 195 aa5.04□□□□□ -1.6
PMS1-215ENST00000447232 FOXN1O15353 648 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 DNAJB2P25686 324 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 RBM26Q5T8P6 1007 aaKnown RBP5.03□□□□□ -1.6
PMS1-215ENST00000447232 PPP1R18Q6NYC8 613 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 NKX2-3Q8TAU0 364 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 USP6P35125 1406 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 IGSF1Q8N6C5 1336 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 PDE4DIPQ5VU43 2346 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 RCCD1A6NED2 376 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 SLC27A3Q5K4L6 730 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 C16orf71Q8IYS4 520 aaPredicted RBP5.03□□□□□ -1.6
PMS1-215ENST00000447232 NGDNQ8NEJ9 315 aaKnown RBP5.03□□□□□ -1.6
PMS1-215ENST00000447232 TFCP2L1Q9NZI6 479 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 COL18A1P39060 1754 aa5.03□□□□□ -1.6
PMS1-215ENST00000447232 EIF3AQ14152 1382 aaKnown RBP5.02□□□□□ -1.61
PMS1-215ENST00000447232 ABCC6O95255 1503 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 SLC4A3P48751 1232 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 NUTM2GQ5VZR2 741 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 PRAM1Q96QH2 718 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 KDM2AQ9Y2K7 1162 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 QRICH2Q9H0J4 1663 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 PIK3C2AO00443 1686 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 TNRC6CQ9HCJ0 1690 aaKnown RBP5.02□□□□□ -1.61
PMS1-215ENST00000447232 COPS2P61201 443 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 SMC1BQ8NDV3 1235 aa5.02□□□□□ -1.61
PMS1-215ENST00000447232 ITSN1Q15811 1721 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 WDR17Q8IZU2 1322 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 SAFB2Q14151 953 aaKnown RBP eCLIP5.01□□□□□ -1.61
PMS1-215ENST00000447232 TOM1L2Q6ZVM7 507 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
PMS1-215ENST00000447232 ACSBG1Q96GR2 724 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 HIRIP3Q9BW71 556 aaPredicted RBP5.01□□□□□ -1.61
PMS1-215ENST00000447232 LY75O60449 1722 aa5.01□□□□□ -1.61
PMS1-215ENST00000447232 PKD1L3Q7Z443 1732 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms