RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 SIL1Q9H173 461 aa12.11□□□□□ -0.47
LINC01949-201ENST00000445770 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
LINC01949-201ENST00000445770 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
LINC01949-201ENST00000445770 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
LINC01949-201ENST00000445770 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
LINC01949-201ENST00000445770 ADCY9O60503 1353 aa12.1□□□□□ -0.47
LINC01949-201ENST00000445770 DDIT3P35638 169 aa12.1□□□□□ -0.47
LINC01949-201ENST00000445770 OS9Q13438 667 aaPredicted RBP12.1□□□□□ -0.47
LINC01949-201ENST00000445770 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
LINC01949-201ENST00000445770 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
LINC01949-201ENST00000445770 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
LINC01949-201ENST00000445770 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
LINC01949-201ENST00000445770 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
LINC01949-201ENST00000445770 SNX21Q969T3 373 aa12.09□□□□□ -0.47
LINC01949-201ENST00000445770 IBTKQ9P2D0 1353 aaPredicted RBP12.09□□□□□ -0.47
LINC01949-201ENST00000445770 GIGYF1O75420 1035 aaPredicted RBP12.09□□□□□ -0.47
LINC01949-201ENST00000445770 ATF3P18847 181 aa12.09□□□□□ -0.47
LINC01949-201ENST00000445770 LRRC37A3O60309 1634 aa12.09□□□□□ -0.47
LINC01949-201ENST00000445770 ERBB3P21860 1342 aa12.08□□□□□ -0.47
LINC01949-201ENST00000445770 ERC2O15083 957 aa12.08□□□□□ -0.48
LINC01949-201ENST00000445770 NEK4P51957 841 aa12.08□□□□□ -0.48
LINC01949-201ENST00000445770 C9orf78Q9NZ63 289 aaPredicted RBP12.08□□□□□ -0.48
LINC01949-201ENST00000445770 SALL3Q9BXA9 1300 aa12.08□□□□□ -0.48
LINC01949-201ENST00000445770 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 CPA1P15085 419 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 CASC1Q6TDU7 716 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 RHPN1Q8TCX5 695 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 NDUFB9Q9Y6M9 179 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 C1orf167Q5SNV9 1468 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
LINC01949-201ENST00000445770 CHMLP26374 656 aa12.06□□□□□ -0.48
LINC01949-201ENST00000445770 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
LINC01949-201ENST00000445770 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
LINC01949-201ENST00000445770 RAB3GAP1Q15042 981 aa12.06□□□□□ -0.48
LINC01949-201ENST00000445770 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
LINC01949-201ENST00000445770 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
LINC01949-201ENST00000445770 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
LINC01949-201ENST00000445770 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
LINC01949-201ENST00000445770 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
LINC01949-201ENST00000445770 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
LINC01949-201ENST00000445770 CHGBP05060 677 aa12.05□□□□□ -0.48
LINC01949-201ENST00000445770 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
LINC01949-201ENST00000445770 RABEP1Q15276 862 aa12.05□□□□□ -0.48
LINC01949-201ENST00000445770 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
LINC01949-201ENST00000445770 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
LINC01949-201ENST00000445770 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
LINC01949-201ENST00000445770 NCLP19338 710 aaKnown RBP12.04□□□□□ -0.48
LINC01949-201ENST00000445770 MCTP1Q6DN14 999 aa12.04□□□□□ -0.48
LINC01949-201ENST00000445770 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
LINC01949-201ENST00000445770 BICC1Q9H694 974 aaKnown RBP12.04□□□□□ -0.48
LINC01949-201ENST00000445770 CYP27B1O15528 508 aa12.04□□□□□ -0.48
LINC01949-201ENST00000445770 REC8O95072 547 aa12.04□□□□□ -0.48
LINC01949-201ENST00000445770 XRCC6P12956 609 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC01949-201ENST00000445770 GAS2L3Q86XJ1 694 aa12.04□□□□□ -0.48
LINC01949-201ENST00000445770 CCDC8Q9H0W5 538 aaPredicted RBP12.04□□□□□ -0.48
LINC01949-201ENST00000445770 MEGF6O75095 1541 aa12.04□□□□□ -0.48
LINC01949-201ENST00000445770 ZNF790Q6PG37 636 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 PI4K2BQ8TCG2 481 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 EDC3Q96F86 508 aaKnown RBP12.03□□□□□ -0.48
LINC01949-201ENST00000445770 KAZALD1Q96I82 304 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 ZNF330Q9Y3S2 320 aaPredicted RBP12.03□□□□□ -0.48
LINC01949-201ENST00000445770 PDIA6Q15084 440 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 COPS6Q7L5N1 327 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 RIC3Q7Z5B4 369 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 UBE2Q2Q8WVN8 375 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
LINC01949-201ENST00000445770 EPHA10Q5JZY3 1008 aa12.02□□□□□ -0.48
LINC01949-201ENST00000445770 MYD88Q99836 296 aa12.02□□□□□ -0.48
LINC01949-201ENST00000445770 OSBPL3Q9H4L5 887 aa12.02□□□□□ -0.48
LINC01949-201ENST00000445770 IGKV5-2P06315 115 aa12.02□□□□□ -0.49
LINC01949-201ENST00000445770 KDM6AO15550 1401 aaPredicted RBP12.02□□□□□ -0.49
LINC01949-201ENST00000445770 MED1Q15648 1581 aaPredicted RBP12.02□□□□□ -0.49
LINC01949-201ENST00000445770 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.49
LINC01949-201ENST00000445770 GOLGA6L3A6NEY3 463 aa12.02□□□□□ -0.49
LINC01949-201ENST00000445770 POLA2Q14181 598 aa12.02□□□□□ -0.49
LINC01949-201ENST00000445770 STRN4Q9NRL3 753 aa12.02□□□□□ -0.49
LINC01949-201ENST00000445770 ST18O60284 1047 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
LINC01949-201ENST00000445770 PHKG2P15735 406 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 KSR2Q6VAB6 950 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 AACSQ86V21 672 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 SLC52A2Q9HAB3 445 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
LINC01949-201ENST00000445770 ZDHHC9Q9Y397 364 aa12.01□□□□□ -0.49
LINC01949-201ENST00000445770 ZNF142P52746 1687 aaPredicted RBP12□□□□□ -0.49
LINC01949-201ENST00000445770 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
LINC01949-201ENST00000445770 GRM8O00222 908 aa12□□□□□ -0.49
LINC01949-201ENST00000445770 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
LINC01949-201ENST00000445770 GBP4Q96PP9 640 aa12□□□□□ -0.49
LINC01949-201ENST00000445770 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
LINC01949-201ENST00000445770 KIF1BPQ96EK5 621 aa11.99□□□□□ -0.49
LINC01949-201ENST00000445770 MST1RQ04912 1400 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms