RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
CALD1-211ENST00000445569 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
CALD1-211ENST00000445569 G2E3Q7L622 706 aa13.06□□□□□ -0.32
CALD1-211ENST00000445569 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
CALD1-211ENST00000445569 SLIT2O94813 1529 aa13.06□□□□□ -0.32
CALD1-211ENST00000445569 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
CALD1-211ENST00000445569 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
CALD1-211ENST00000445569 GNAI2P04899 355 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 CABP4P57796 275 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 DISP2A7MBM2 1401 aa13.05□□□□□ -0.32
CALD1-211ENST00000445569 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
CALD1-211ENST00000445569 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
CALD1-211ENST00000445569 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 CHD1LQ86WJ1 897 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 FMNL2Q96PY5 1086 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 MEIS3Q99687 375 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 TNS2Q63HR2 1409 aa13.04□□□□□ -0.32
CALD1-211ENST00000445569 F6X3S4 739 aa13.03□□□□□ -0.32
CALD1-211ENST00000445569 KCNQ3O43525 872 aa13.03□□□□□ -0.32
CALD1-211ENST00000445569 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
CALD1-211ENST00000445569 VPS72Q15906 364 aa13.03□□□□□ -0.32
CALD1-211ENST00000445569 LARP1Q6PKG0 1096 aaKnown RBP13.03□□□□□ -0.32
CALD1-211ENST00000445569 DNAAF4Q8WXU2 420 aa13.03□□□□□ -0.32
CALD1-211ENST00000445569 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
CALD1-211ENST00000445569 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
CALD1-211ENST00000445569 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
CALD1-211ENST00000445569 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
CALD1-211ENST00000445569 ALDH1L1O75891 902 aa13.02□□□□□ -0.33
CALD1-211ENST00000445569 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
CALD1-211ENST00000445569 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
CALD1-211ENST00000445569 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
CALD1-211ENST00000445569 UBTFL1P0CB47 393 aaPredicted RBP13.01□□□□□ -0.33
CALD1-211ENST00000445569 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
CALD1-211ENST00000445569 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
CALD1-211ENST00000445569 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
CALD1-211ENST00000445569 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
CALD1-211ENST00000445569 ADCY9O60503 1353 aa13.01□□□□□ -0.33
CALD1-211ENST00000445569 ARFGEF2Q9Y6D5 1785 aa13.01□□□□□ -0.33
CALD1-211ENST00000445569 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
CALD1-211ENST00000445569 ANKRD45Q5TZF3 282 aa13□□□□□ -0.33
CALD1-211ENST00000445569 LNPKQ9C0E8 428 aa13□□□□□ -0.33
CALD1-211ENST00000445569 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
CALD1-211ENST00000445569 BMP2KLQ5H9B9 411 aa12.99□□□□□ -0.33
CALD1-211ENST00000445569 KSR2Q6VAB6 950 aa12.99□□□□□ -0.33
CALD1-211ENST00000445569 ERICH6Q7L0X2 663 aa12.99□□□□□ -0.33
CALD1-211ENST00000445569 IPO9Q96P70 1041 aaKnown RBP12.99□□□□□ -0.33
CALD1-211ENST00000445569 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
CALD1-211ENST00000445569 ITGB4P16144 1822 aa12.98□□□□□ -0.33
CALD1-211ENST00000445569 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
CALD1-211ENST00000445569 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
CALD1-211ENST00000445569 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
CALD1-211ENST00000445569 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
CALD1-211ENST00000445569 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
CALD1-211ENST00000445569 DOT1LQ8TEK3 1739 aa12.98□□□□□ -0.33
CALD1-211ENST00000445569 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
CALD1-211ENST00000445569 NUP188Q5SRE5 1749 aa12.97□□□□□ -0.33
CALD1-211ENST00000445569 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
CALD1-211ENST00000445569 SLC39A6Q13433 755 aa12.97□□□□□ -0.33
CALD1-211ENST00000445569 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
CALD1-211ENST00000445569 NPM2Q86SE8 214 aaKnown RBP12.97□□□□□ -0.33
CALD1-211ENST00000445569 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.96□□□□□ -0.33
CALD1-211ENST00000445569 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
CALD1-211ENST00000445569 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
CALD1-211ENST00000445569 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
CALD1-211ENST00000445569 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
CALD1-211ENST00000445569 CICQ96RK0 1608 aaPredicted RBP12.95□□□□□ -0.34
CALD1-211ENST00000445569 ATP8B2P98198 1209 aa12.95□□□□□ -0.34
CALD1-211ENST00000445569 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
CALD1-211ENST00000445569 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
CALD1-211ENST00000445569 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
CALD1-211ENST00000445569 LRRFIP2Q9Y608 721 aaKnown RBP12.95□□□□□ -0.34
CALD1-211ENST00000445569 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
CALD1-211ENST00000445569 SPATA31A1Q5TZJ5 1347 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 SPATA31A5Q5VU36 1347 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 SPATA31A7Q8IWB4 1347 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 PRAMEF22A3QJZ6 481 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 ANXA1P04083 346 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 PDIA6Q15084 440 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
CALD1-211ENST00000445569 RIC3Q7Z5B4 369 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
CALD1-211ENST00000445569 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
CALD1-211ENST00000445569 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
CALD1-211ENST00000445569 NOP58Q9Y2X3 529 aaKnown RBP12.93□□□□□ -0.34
CALD1-211ENST00000445569 UTYO14607 1347 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 BCL9O00512 1426 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 MTX1Q13505 466 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 KRT27Q7Z3Y8 459 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 SSH3Q8TE77 659 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 281.8 ms