RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
HDAC8-215ENST00000444609 DDX21Q9NR30 783 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC8-215ENST00000444609 RGPD2P0DJD1 1756 aa14.63□□□□□ -0.07
HDAC8-215ENST00000444609 DLL1O00548 723 aa14.63□□□□□ -0.07
HDAC8-215ENST00000444609 AOC2O75106 756 aa14.63□□□□□ -0.07
HDAC8-215ENST00000444609 C2CD5Q86YS7 1000 aa14.63□□□□□ -0.07
HDAC8-215ENST00000444609 NBPF15Q8N660 670 aa14.63□□□□□ -0.07
HDAC8-215ENST00000444609 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
HDAC8-215ENST00000444609 LTBP1Q14766 1721 aa14.63□□□□□ -0.07
HDAC8-215ENST00000444609 LTBP3Q9NS15 1303 aa14.63□□□□□ -0.07
HDAC8-215ENST00000444609 H0YIN7 160 aa14.62□□□□□ -0.07
HDAC8-215ENST00000444609 EPHX2P34913 555 aa14.62□□□□□ -0.07
HDAC8-215ENST00000444609 PNMA8AQ86V59 439 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-215ENST00000444609 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
HDAC8-215ENST00000444609 HACL1Q9UJ83 578 aa14.62□□□□□ -0.07
HDAC8-215ENST00000444609 C21orf2O43822 256 aa14.61□□□□□ -0.07
HDAC8-215ENST00000444609 TAOK3Q9H2K8 898 aa14.61□□□□□ -0.07
HDAC8-215ENST00000444609 RTL1A6NKG5 1358 aa14.6□□□□□ -0.07
HDAC8-215ENST00000444609 BRPF1P55201 1214 aaPredicted RBP14.6□□□□□ -0.07
HDAC8-215ENST00000444609 TMC1Q8TDI8 760 aa14.6□□□□□ -0.07
HDAC8-215ENST00000444609 COG3Q96JB2 828 aa14.6□□□□□ -0.07
HDAC8-215ENST00000444609 SLC12A5Q9H2X9 1139 aa14.6□□□□□ -0.07
HDAC8-215ENST00000444609 SPG7Q9UQ90 795 aa14.6□□□□□ -0.07
HDAC8-215ENST00000444609 CCDC88AQ3V6T2 1871 aa14.59□□□□□ -0.07
HDAC8-215ENST00000444609 TLL2Q9Y6L7 1015 aa14.59□□□□□ -0.07
HDAC8-215ENST00000444609 FXR1P51114 621 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC8-215ENST00000444609 NFIXQ14938 502 aa14.58□□□□□ -0.08
HDAC8-215ENST00000444609 RRS1Q15050 365 aaKnown RBP14.58□□□□□ -0.08
HDAC8-215ENST00000444609 CST9Q5W186 159 aa14.58□□□□□ -0.08
HDAC8-215ENST00000444609 CASP8AP2Q9UKL3 1982 aa14.58□□□□□ -0.08
HDAC8-215ENST00000444609 CRKLP46109 303 aaKnown RBP14.57□□□□□ -0.08
HDAC8-215ENST00000444609 FMR1Q06787 632 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDAC8-215ENST00000444609 TERF2IPQ9NYB0 399 aa14.57□□□□□ -0.08
HDAC8-215ENST00000444609 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
HDAC8-215ENST00000444609 SCN4AP35499 1836 aa14.57□□□□□ -0.08
HDAC8-215ENST00000444609 SERPINB2P05120 415 aa14.56□□□□□ -0.08
HDAC8-215ENST00000444609 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
HDAC8-215ENST00000444609 USPL1Q5W0Q7 1092 aa14.56□□□□□ -0.08
HDAC8-215ENST00000444609 ZPR1O75312 459 aa14.55□□□□□ -0.08
HDAC8-215ENST00000444609 PHKG2P15735 406 aa14.55□□□□□ -0.08
HDAC8-215ENST00000444609 IFNL2Q8IZJ0 200 aa14.55□□□□□ -0.08
HDAC8-215ENST00000444609 ZNF622Q969S3 477 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDAC8-215ENST00000444609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDAC8-215ENST00000444609 A0A1W2PP64 1363 aa14.55□□□□□ -0.08
HDAC8-215ENST00000444609 CIAPIN1Q6FI81 312 aa14.54□□□□□ -0.08
HDAC8-215ENST00000444609 INSRP06213 1382 aa14.54□□□□□ -0.08
HDAC8-215ENST00000444609 DICER1Q9UPY3 1922 aaKnown RBP14.54□□□□□ -0.08
HDAC8-215ENST00000444609 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
HDAC8-215ENST00000444609 ZNF541Q9H0D2 1346 aa14.53□□□□□ -0.08
HDAC8-215ENST00000444609 SAPCD2Q86UD0 394 aa14.53□□□□□ -0.08
HDAC8-215ENST00000444609 CARMIL3Q8ND23 1372 aa14.52□□□□□ -0.08
HDAC8-215ENST00000444609 RNF123Q5XPI4 1314 aa14.52□□□□□ -0.08
HDAC8-215ENST00000444609 INTS5Q6P9B9 1019 aaKnown RBP14.52□□□□□ -0.09
HDAC8-215ENST00000444609 HHIPL1Q96JK4 782 aa14.52□□□□□ -0.09
HDAC8-215ENST00000444609 PDZRN3Q9UPQ7 1066 aa14.52□□□□□ -0.09
HDAC8-215ENST00000444609 DLEC1Q9Y238 1755 aa14.52□□□□□ -0.09
HDAC8-215ENST00000444609 ERVV-2B6SEH9 535 aa14.51□□□□□ -0.09
HDAC8-215ENST00000444609 TRAF5O00463 557 aa14.51□□□□□ -0.09
HDAC8-215ENST00000444609 COL5A3P25940 1745 aaPredicted RBP14.51□□□□□ -0.09
HDAC8-215ENST00000444609 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
HDAC8-215ENST00000444609 SOGA3Q5TF21 947 aa14.5□□□□□ -0.09
HDAC8-215ENST00000444609 FER1L6Q2WGJ9 1857 aa14.5□□□□□ -0.09
HDAC8-215ENST00000444609 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
HDAC8-215ENST00000444609 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
HDAC8-215ENST00000444609 PDE6BP35913 854 aa14.49□□□□□ -0.09
HDAC8-215ENST00000444609 BRIP1Q9BX63 1249 aa14.49□□□□□ -0.09
HDAC8-215ENST00000444609 BCL2L12Q9HB09 334 aa14.49□□□□□ -0.09
HDAC8-215ENST00000444609 NARFQ9UHQ1 456 aa14.49□□□□□ -0.09
HDAC8-215ENST00000444609 ZIC5Q96T25 663 aa14.48□□□□□ -0.09
HDAC8-215ENST00000444609 HPS5Q9UPZ3 1129 aa14.48□□□□□ -0.09
HDAC8-215ENST00000444609 NRXN2Q9P2S2 1712 aa14.48□□□□□ -0.09
HDAC8-215ENST00000444609 CTU1Q7Z7A3 348 aaKnown RBP14.47□□□□□ -0.09
HDAC8-215ENST00000444609 GPC2Q8N158 579 aa14.47□□□□□ -0.09
HDAC8-215ENST00000444609 SLC17A8Q8NDX2 589 aa14.47□□□□□ -0.09
HDAC8-215ENST00000444609 CNKSR1Q969H4 720 aa14.47□□□□□ -0.09
HDAC8-215ENST00000444609 NCAPD2Q15021 1401 aa14.47□□□□□ -0.09
HDAC8-215ENST00000444609 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
HDAC8-215ENST00000444609 FZD9O00144 591 aa14.46□□□□□ -0.09
HDAC8-215ENST00000444609 NOGQ13253 232 aa14.46□□□□□ -0.09
HDAC8-215ENST00000444609 BICDL1Q6ZP65 573 aa14.46□□□□□ -0.09
HDAC8-215ENST00000444609 SAGE1Q9NXZ1 904 aa14.46□□□□□ -0.09
HDAC8-215ENST00000444609 FLT4P35916 1363 aa14.46□□□□□ -0.1
HDAC8-215ENST00000444609 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
HDAC8-215ENST00000444609 PRPF40BQ6NWY9 871 aaKnown RBP14.45□□□□□ -0.1
HDAC8-215ENST00000444609 C7orf43Q8WVR3 580 aa14.45□□□□□ -0.1
HDAC8-215ENST00000444609 KIF24Q5T7B8 1368 aa14.45□□□□□ -0.1
HDAC8-215ENST00000444609 AFDNP55196 1824 aaKnown RBP14.44□□□□□ -0.1
HDAC8-215ENST00000444609 CELF2O95319 508 aaKnown RBP14.44□□□□□ -0.1
HDAC8-215ENST00000444609 STYK1Q6J9G0 422 aa14.44□□□□□ -0.1
HDAC8-215ENST00000444609 ZNF277Q9NRM2 450 aaPredicted RBP14.44□□□□□ -0.1
HDAC8-215ENST00000444609 ADAMTS7Q9UKP4 1686 aa14.44□□□□□ -0.1
HDAC8-215ENST00000444609 CABP4P57796 275 aa14.43□□□□□ -0.1
HDAC8-215ENST00000444609 FKBP4Q02790 459 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC8-215ENST00000444609 AKAP4Q5JQC9 854 aa14.43□□□□□ -0.1
HDAC8-215ENST00000444609 FYB1O15117 783 aa14.42□□□□□ -0.1
HDAC8-215ENST00000444609 CCDC93Q567U6 631 aa14.42□□□□□ -0.1
HDAC8-215ENST00000444609 USP50Q70EL3 339 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-215ENST00000444609 PUS7Q96PZ0 661 aaKnown RBP14.42□□□□□ -0.1
HDAC8-215ENST00000444609 HSP90AB1P08238 724 aaKnown RBP14.41□□□□□ -0.1
HDAC8-215ENST00000444609 SRGNP10124 158 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms