RNA–Protein interactions for RNA: ENST00000444491.5

ITSN1-219, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 827 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-219ENST00000444491 PRKRIP1Q9H875 184 aaPredicted RBP24.53■■□□□ 1.52
ITSN1-219ENST00000444491 ZBTB1Q9Y2K1 713 aa24.53■■□□□ 1.52
ITSN1-219ENST00000444491 SRP68Q9UHB9 627 aaKnown RBP24.52■■□□□ 1.52
ITSN1-219ENST00000444491 CHD4Q14839 1912 aa24.52■■□□□ 1.52
ITSN1-219ENST00000444491 KCNQ3O43525 872 aa24.51■■□□□ 1.51
ITSN1-219ENST00000444491 CANXP27824 592 aaKnown RBP24.51■■□□□ 1.51
ITSN1-219ENST00000444491 TAF7Q15545 349 aaPredicted RBP24.51■■□□□ 1.51
ITSN1-219ENST00000444491 PARP3Q9Y6F1 533 aa24.51■■□□□ 1.51
ITSN1-219ENST00000444491 COL15A1P39059 1388 aa24.51■■□□□ 1.51
ITSN1-219ENST00000444491 WDR43Q15061 677 aaKnown RBP eCLIP24.5■■□□□ 1.51
ITSN1-219ENST00000444491 NARFQ9UHQ1 456 aa24.49■■□□□ 1.51
ITSN1-219ENST00000444491 A0A087WZG4 1122 aa24.48■■□□□ 1.51
ITSN1-219ENST00000444491 FKBP8Q14318 412 aa24.48■■□□□ 1.51
ITSN1-219ENST00000444491 PNISRQ8TF01 805 aaKnown RBP24.48■■□□□ 1.51
ITSN1-219ENST00000444491 GRIN3BO60391 1043 aa24.47■■□□□ 1.51
ITSN1-219ENST00000444491 SNRPA1P09661 255 aaKnown RBP24.47■■□□□ 1.51
ITSN1-219ENST00000444491 USPL1Q5W0Q7 1092 aa24.47■■□□□ 1.51
ITSN1-219ENST00000444491 NPM2Q86SE8 214 aaKnown RBP24.47■■□□□ 1.51
ITSN1-219ENST00000444491 EIF5P55010 431 aaKnown RBP24.46■■□□□ 1.51
ITSN1-219ENST00000444491 IL6STP40189 918 aaPredicted RBP24.45■■□□□ 1.5
ITSN1-219ENST00000444491 KIF13BQ9NQT8 1826 aa24.45■■□□□ 1.5
ITSN1-219ENST00000444491 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
ITSN1-219ENST00000444491 RIPK4P57078 832 aa24.44■■□□□ 1.5
ITSN1-219ENST00000444491 LMOD3Q0VAK6 560 aa24.44■■□□□ 1.5
ITSN1-219ENST00000444491 YBX3P16989 372 aaKnown RBP eCLIP24.43■■□□□ 1.5
ITSN1-219ENST00000444491 ZNF330Q9Y3S2 320 aaPredicted RBP24.43■■□□□ 1.5
ITSN1-219ENST00000444491 C10orf71Q711Q0 1435 aa24.43■■□□□ 1.5
ITSN1-219ENST00000444491 A1BGP04217 495 aa24.42■■□□□ 1.5
ITSN1-219ENST00000444491 TMPOP42166 694 aaKnown RBP24.42■■□□□ 1.5
ITSN1-219ENST00000444491 TGFB2P61812 414 aa24.42■■□□□ 1.5
ITSN1-219ENST00000444491 THUMPD2Q9BTF0 503 aaKnown RBP24.42■■□□□ 1.5
ITSN1-219ENST00000444491 MIS18AQ9NYP9 233 aa24.42■■□□□ 1.5
ITSN1-219ENST00000444491 USP16Q9Y5T5 823 aa24.42■■□□□ 1.5
ITSN1-219ENST00000444491 TM4SF1P30408 202 aa24.41■■□□□ 1.5
ITSN1-219ENST00000444491 DDR1Q08345 913 aa24.41■■□□□ 1.5
ITSN1-219ENST00000444491 CCDC146Q8IYE0 955 aa24.4■■□□□ 1.5
ITSN1-219ENST00000444491 RUNDC1Q96C34 613 aa24.4■■□□□ 1.5
ITSN1-219ENST00000444491 KDM3BQ7LBC6 1761 aa24.39■■□□□ 1.5
ITSN1-219ENST00000444491 POLRMTO00411 1230 aaKnown RBP24.39■■□□□ 1.49
ITSN1-219ENST00000444491 ADAMTS8Q9UP79 889 aa24.39■■□□□ 1.49
ITSN1-219ENST00000444491 PRAMEF22A3QJZ6 481 aa24.38■■□□□ 1.49
ITSN1-219ENST00000444491 NFIXQ14938 502 aa24.38■■□□□ 1.49
ITSN1-219ENST00000444491 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
ITSN1-219ENST00000444491 PXDNLA1KZ92 1463 aa24.38■■□□□ 1.49
ITSN1-219ENST00000444491 TBC1D2BQ9UPU7 963 aa24.37■■□□□ 1.49
ITSN1-219ENST00000444491 UTRNP46939 3433 aa24.36■■□□□ 1.49
ITSN1-219ENST00000444491 WWC3Q9ULE0 1092 aa24.36■■□□□ 1.49
ITSN1-219ENST00000444491 N4BP2Q86UW6 1770 aaPredicted RBP24.36■■□□□ 1.49
ITSN1-219ENST00000444491 A0A0G2JLW4 131 aa24.35■■□□□ 1.49
ITSN1-219ENST00000444491 EIF4A1P60842 406 aaKnown RBP24.35■■□□□ 1.49
ITSN1-219ENST00000444491 NEUROD2Q15784 382 aa24.35■■□□□ 1.49
ITSN1-219ENST00000444491 TSPYL4Q9UJ04 414 aa24.35■■□□□ 1.49
ITSN1-219ENST00000444491 RRP7AQ9Y3A4 280 aaKnown RBP24.35■■□□□ 1.49
ITSN1-219ENST00000444491 GIGYF1O75420 1035 aaPredicted RBP24.34■■□□□ 1.49
ITSN1-219ENST00000444491 DPEP1P16444 411 aa24.34■■□□□ 1.49
ITSN1-219ENST00000444491 DZIP3Q86Y13 1208 aaKnown RBP24.34■■□□□ 1.49
ITSN1-219ENST00000444491 BABAM1Q9NWV8 329 aa24.34■■□□□ 1.49
ITSN1-219ENST00000444491 GOLGB1Q14789 3259 aaKnown RBP24.34■■□□□ 1.49
ITSN1-219ENST00000444491 KIAA1551Q9HCM1 1747 aa24.34■■□□□ 1.49
ITSN1-219ENST00000444491 LAMB4A4D0S4 1761 aa24.34■■□□□ 1.49
ITSN1-219ENST00000444491 SCN7AQ01118 1682 aa24.34■■□□□ 1.49
ITSN1-219ENST00000444491 AFDNP55196 1824 aaKnown RBP24.33■■□□□ 1.49
ITSN1-219ENST00000444491 SERPINB2P05120 415 aa24.33■■□□□ 1.49
ITSN1-219ENST00000444491 PIP4K2AP48426 406 aaPredicted RBP24.33■■□□□ 1.49
ITSN1-219ENST00000444491 BICDL1Q6ZP65 573 aa24.33■■□□□ 1.49
ITSN1-219ENST00000444491 CAMTA2O94983 1202 aa24.31■■□□□ 1.48
ITSN1-219ENST00000444491 NBPF26B4DH59 902 aa24.3■■□□□ 1.48
ITSN1-219ENST00000444491 TBC1D9BQ66K14 1250 aa24.3■■□□□ 1.48
ITSN1-219ENST00000444491 NBPF10Q6P3W6 841 aaKnown RBP24.3■■□□□ 1.48
ITSN1-219ENST00000444491 NBPF15Q8N660 670 aa24.3■■□□□ 1.48
ITSN1-219ENST00000444491 BCS1LQ9Y276 419 aa24.3■■□□□ 1.48
ITSN1-219ENST00000444491 NRXN2Q9P2S2 1712 aa24.3■■□□□ 1.48
ITSN1-219ENST00000444491 ANP32CO43423 234 aa24.29■■□□□ 1.48
ITSN1-219ENST00000444491 PIM2Q9P1W9 311 aa24.29■■□□□ 1.48
ITSN1-219ENST00000444491 ZNF652Q9Y2D9 606 aa24.29■■□□□ 1.48
ITSN1-219ENST00000444491 BRCA1P38398 1863 aaKnown RBP24.28■■□□□ 1.48
ITSN1-219ENST00000444491 CLEC4GQ6UXB4 293 aa24.28■■□□□ 1.48
ITSN1-219ENST00000444491 ZNF784Q8NCA9 323 aaPredicted RBP24.28■■□□□ 1.48
ITSN1-219ENST00000444491 SETDB2Q96T68 719 aa24.28■■□□□ 1.48
ITSN1-219ENST00000444491 BCORQ6W2J9 1755 aa24.28■■□□□ 1.48
ITSN1-219ENST00000444491 CARMIL3Q8ND23 1372 aa24.28■■□□□ 1.48
ITSN1-219ENST00000444491 TRIM35Q9UPQ4 493 aa24.27■■□□□ 1.48
ITSN1-219ENST00000444491 RGL2O15211 777 aa24.26■■□□□ 1.47
ITSN1-219ENST00000444491 KCNA3P22001 575 aa24.26■■□□□ 1.47
ITSN1-219ENST00000444491 CHRNA5P30532 468 aa24.25■■□□□ 1.47
ITSN1-219ENST00000444491 ERBB4Q15303 1308 aa24.25■■□□□ 1.47
ITSN1-219ENST00000444491 NPHP1O15259 732 aa24.24■■□□□ 1.47
ITSN1-219ENST00000444491 DALRD3Q5D0E6 543 aaKnown RBP24.24■■□□□ 1.47
ITSN1-219ENST00000444491 LAS1LQ9Y4W2 734 aaKnown RBP24.24■■□□□ 1.47
ITSN1-219ENST00000444491 CHL1O00533 1208 aa24.23■■□□□ 1.47
ITSN1-219ENST00000444491 APAF1O14727 1248 aa24.23■■□□□ 1.47
ITSN1-219ENST00000444491 ARFGEF1Q9Y6D6 1849 aa24.23■■□□□ 1.47
ITSN1-219ENST00000444491 NGEFQ8N5V2 710 aa24.22■■□□□ 1.47
ITSN1-219ENST00000444491 CNBD1Q8NA66 436 aa24.22■■□□□ 1.47
ITSN1-219ENST00000444491 PDZRN3Q9UPQ7 1066 aa24.22■■□□□ 1.47
ITSN1-219ENST00000444491 CCDC184Q52MB2 194 aa24.21■■□□□ 1.47
ITSN1-219ENST00000444491 PRR5LQ6MZQ0 368 aa24.21■■□□□ 1.47
ITSN1-219ENST00000444491 KIF6Q6ZMV9 814 aa24.21■■□□□ 1.47
ITSN1-219ENST00000444491 H0YIN7 160 aa24.2■■□□□ 1.46
ITSN1-219ENST00000444491 MYL6BP14649 208 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms