RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
SYNCRIP-203ENST00000444272 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
SYNCRIP-203ENST00000444272 SLC4A9Q96Q91 983 aa20.45■□□□□ 0.86
SYNCRIP-203ENST00000444272 AFDNP55196 1824 aaKnown RBP20.44■□□□□ 0.86
SYNCRIP-203ENST00000444272 NKX1-1Q15270 411 aaPredicted RBP20.44■□□□□ 0.86
SYNCRIP-203ENST00000444272 MAP1SQ66K74 1059 aaPredicted RBP20.44■□□□□ 0.86
SYNCRIP-203ENST00000444272 CNTROBQ8N137 903 aa20.44■□□□□ 0.86
SYNCRIP-203ENST00000444272 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
SYNCRIP-203ENST00000444272 ZNF831Q5JPB2 1677 aa20.44■□□□□ 0.86
SYNCRIP-203ENST00000444272 AOC2O75106 756 aa20.42■□□□□ 0.86
SYNCRIP-203ENST00000444272 HABP4Q5JVS0 413 aaKnown RBP20.42■□□□□ 0.86
SYNCRIP-203ENST00000444272 HDGFL2Q7Z4V5 671 aaPredicted RBP20.42■□□□□ 0.86
SYNCRIP-203ENST00000444272 L3MBTL3Q96JM7 780 aaPredicted RBP20.42■□□□□ 0.86
SYNCRIP-203ENST00000444272 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
SYNCRIP-203ENST00000444272 CA12O43570 354 aa20.41■□□□□ 0.86
SYNCRIP-203ENST00000444272 RTL1A6NKG5 1358 aa20.41■□□□□ 0.86
SYNCRIP-203ENST00000444272 TM4SF1P30408 202 aa20.4■□□□□ 0.86
SYNCRIP-203ENST00000444272 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
SYNCRIP-203ENST00000444272 C2CD5Q86YS7 1000 aa20.39■□□□□ 0.85
SYNCRIP-203ENST00000444272 C21orf2O43822 256 aa20.38■□□□□ 0.85
SYNCRIP-203ENST00000444272 MAP2K2P36507 400 aa20.38■□□□□ 0.85
SYNCRIP-203ENST00000444272 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.852e-7■■■□□ 15.8
SYNCRIP-203ENST00000444272 NRXN2Q9P2S2 1712 aa20.37■□□□□ 0.85
SYNCRIP-203ENST00000444272 COG3Q96JB2 828 aa20.37■□□□□ 0.85
SYNCRIP-203ENST00000444272 TAOK3Q9H2K8 898 aa20.37■□□□□ 0.85
SYNCRIP-203ENST00000444272 A0A1W2PP64 1363 aa20.36■□□□□ 0.85
SYNCRIP-203ENST00000444272 DLL1O00548 723 aa20.36■□□□□ 0.85
SYNCRIP-203ENST00000444272 RRS1Q15050 365 aaKnown RBP20.36■□□□□ 0.85
SYNCRIP-203ENST00000444272 HACL1Q9UJ83 578 aa20.36■□□□□ 0.85
SYNCRIP-203ENST00000444272 H0YIN7 160 aa20.35■□□□□ 0.85
SYNCRIP-203ENST00000444272 EPHX2P34913 555 aa20.35■□□□□ 0.85
SYNCRIP-203ENST00000444272 NBPF15Q8N660 670 aa20.35■□□□□ 0.85
SYNCRIP-203ENST00000444272 FMR1Q06787 632 aaKnown RBP eCLIP20.34■□□□□ 0.85
SYNCRIP-203ENST00000444272 SLC12A5Q9H2X9 1139 aa20.34■□□□□ 0.85
SYNCRIP-203ENST00000444272 LTBP3Q9NS15 1303 aa20.33■□□□□ 0.85
SYNCRIP-203ENST00000444272 ADAMTS7Q9UKP4 1686 aa20.33■□□□□ 0.85
SYNCRIP-203ENST00000444272 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
SYNCRIP-203ENST00000444272 PNMA8AQ86V59 439 aaPredicted RBP20.32■□□□□ 0.84
SYNCRIP-203ENST00000444272 CARMIL3Q8ND23 1372 aa20.32■□□□□ 0.84
SYNCRIP-203ENST00000444272 TRPM7Q96QT4 1865 aa20.31■□□□□ 0.84
SYNCRIP-203ENST00000444272 CRKLP46109 303 aaKnown RBP20.31■□□□□ 0.84
SYNCRIP-203ENST00000444272 USPL1Q5W0Q7 1092 aa20.31■□□□□ 0.84
SYNCRIP-203ENST00000444272 ZNF622Q969S3 477 aaKnown RBP eCLIP20.31■□□□□ 0.847e-6■■□□□ 12.8
SYNCRIP-203ENST00000444272 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
SYNCRIP-203ENST00000444272 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
SYNCRIP-203ENST00000444272 TLL2Q9Y6L7 1015 aa20.3■□□□□ 0.84
SYNCRIP-203ENST00000444272 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
SYNCRIP-203ENST00000444272 ZNF541Q9H0D2 1346 aa20.29■□□□□ 0.84
SYNCRIP-203ENST00000444272 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.84
SYNCRIP-203ENST00000444272 NFIXQ14938 502 aa20.29■□□□□ 0.84
SYNCRIP-203ENST00000444272 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
SYNCRIP-203ENST00000444272 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
SYNCRIP-203ENST00000444272 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
SYNCRIP-203ENST00000444272 ZPR1O75312 459 aa20.28■□□□□ 0.84
SYNCRIP-203ENST00000444272 SERPINB2P05120 415 aa20.28■□□□□ 0.84
SYNCRIP-203ENST00000444272 COL11A2P13942 1736 aaPredicted RBP20.27■□□□□ 0.84
SYNCRIP-203ENST00000444272 PHKG2P15735 406 aa20.27■□□□□ 0.84
SYNCRIP-203ENST00000444272 CST9Q5W186 159 aa20.27■□□□□ 0.84
SYNCRIP-203ENST00000444272 CIAPIN1Q6FI81 312 aa20.27■□□□□ 0.84
SYNCRIP-203ENST00000444272 SZT2Q5T011 3432 aa20.27■□□□□ 0.84
SYNCRIP-203ENST00000444272 INSRP06213 1382 aa20.26■□□□□ 0.83
SYNCRIP-203ENST00000444272 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
SYNCRIP-203ENST00000444272 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
SYNCRIP-203ENST00000444272 MKI67P46013 3256 aaKnown RBP20.25■□□□□ 0.83
SYNCRIP-203ENST00000444272 TJP1Q07157 1748 aa20.24■□□□□ 0.83
SYNCRIP-203ENST00000444272 A0A0C4DFX4 3053 aa20.23■□□□□ 0.83
SYNCRIP-203ENST00000444272 TRAF5O00463 557 aa20.22■□□□□ 0.83
SYNCRIP-203ENST00000444272 SLX4Q8IY92 1834 aa20.22■□□□□ 0.83
SYNCRIP-203ENST00000444272 PTCD1O75127 700 aaKnown RBP20.21■□□□□ 0.83
SYNCRIP-203ENST00000444272 FLT4P35916 1363 aa20.21■□□□□ 0.83
SYNCRIP-203ENST00000444272 SAPCD2Q86UD0 394 aa20.2■□□□□ 0.82
SYNCRIP-203ENST00000444272 NCAPD2Q15021 1401 aa20.19■□□□□ 0.82
SYNCRIP-203ENST00000444272 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
SYNCRIP-203ENST00000444272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.821e-6■□□□□ 8.7
SYNCRIP-203ENST00000444272 ARFGEF2Q9Y6D5 1785 aa20.17■□□□□ 0.82
SYNCRIP-203ENST00000444272 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
SYNCRIP-203ENST00000444272 BICDL1Q6ZP65 573 aa20.17■□□□□ 0.82
SYNCRIP-203ENST00000444272 ZIC5Q96T25 663 aa20.17■□□□□ 0.82
SYNCRIP-203ENST00000444272 PDE6BP35913 854 aa20.16■□□□□ 0.82
SYNCRIP-203ENST00000444272 SOGA3Q5TF21 947 aa20.16■□□□□ 0.82
SYNCRIP-203ENST00000444272 NARFQ9UHQ1 456 aa20.16■□□□□ 0.82
SYNCRIP-203ENST00000444272 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
SYNCRIP-203ENST00000444272 HPS5Q9UPZ3 1129 aa20.16■□□□□ 0.82
SYNCRIP-203ENST00000444272 ROCK2O75116 1388 aaKnown RBP20.16■□□□□ 0.82
SYNCRIP-203ENST00000444272 PRPF40BQ6NWY9 871 aaKnown RBP20.15■□□□□ 0.82
SYNCRIP-203ENST00000444272 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
SYNCRIP-203ENST00000444272 SLC17A8Q8NDX2 589 aa20.15■□□□□ 0.82
SYNCRIP-203ENST00000444272 BCL2L12Q9HB09 334 aa20.15■□□□□ 0.82
SYNCRIP-203ENST00000444272 SOS1Q07889 1333 aaPredicted RBP20.15■□□□□ 0.82
SYNCRIP-203ENST00000444272 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
SYNCRIP-203ENST00000444272 CUL9Q8IWT3 2517 aa20.14■□□□□ 0.82
SYNCRIP-203ENST00000444272 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
SYNCRIP-203ENST00000444272 GPC2Q8N158 579 aa20.14■□□□□ 0.81
SYNCRIP-203ENST00000444272 HHIPL1Q96JK4 782 aa20.14■□□□□ 0.81
SYNCRIP-203ENST00000444272 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.81
SYNCRIP-203ENST00000444272 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
SYNCRIP-203ENST00000444272 CNKSR1Q969H4 720 aa20.13■□□□□ 0.81
SYNCRIP-203ENST00000444272 BRIP1Q9BX63 1249 aa20.13■□□□□ 0.81
SYNCRIP-203ENST00000444272 COL15A1P39059 1388 aa20.12■□□□□ 0.81
SYNCRIP-203ENST00000444272 NOGQ13253 232 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms