RNA–Protein interactions for RNA: ENST00000443722.5

PMPCB-203, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-203ENST00000443722 STARD3NLO95772 234 aa17.64■□□□□ 0.41
PMPCB-203ENST00000443722 ZNF330Q9Y3S2 320 aaPredicted RBP17.64■□□□□ 0.41
PMPCB-203ENST00000443722 COL15A1P39059 1388 aa17.63■□□□□ 0.41
PMPCB-203ENST00000443722 PRAMEF22A3QJZ6 481 aa17.63■□□□□ 0.41
PMPCB-203ENST00000443722 A1BGP04217 495 aa17.63■□□□□ 0.41
PMPCB-203ENST00000443722 PIP4K2AP48426 406 aaPredicted RBP17.63■□□□□ 0.41
PMPCB-203ENST00000443722 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
PMPCB-203ENST00000443722 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
PMPCB-203ENST00000443722 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
PMPCB-203ENST00000443722 DPEP1P16444 411 aa17.62■□□□□ 0.41
PMPCB-203ENST00000443722 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
PMPCB-203ENST00000443722 NARFQ9UHQ1 456 aa17.62■□□□□ 0.41
PMPCB-203ENST00000443722 C10orf71Q711Q0 1435 aa17.62■□□□□ 0.41
PMPCB-203ENST00000443722 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
PMPCB-203ENST00000443722 TM4SF1P30408 202 aa17.61■□□□□ 0.41
PMPCB-203ENST00000443722 PLEKHF1Q96S99 279 aa17.61■□□□□ 0.41
PMPCB-203ENST00000443722 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
PMPCB-203ENST00000443722 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
PMPCB-203ENST00000443722 EIF5P55010 431 aaKnown RBP17.6■□□□□ 0.41
PMPCB-203ENST00000443722 TGFB2P61812 414 aa17.6■□□□□ 0.41
PMPCB-203ENST00000443722 NFIXQ14938 502 aa17.6■□□□□ 0.41
PMPCB-203ENST00000443722 BCS1LQ9Y276 419 aa17.6■□□□□ 0.41
PMPCB-203ENST00000443722 USP16Q9Y5T5 823 aa17.6■□□□□ 0.41
PMPCB-203ENST00000443722 SIPA1L3O60292 1781 aaPredicted RBP17.59■□□□□ 0.41
PMPCB-203ENST00000443722 RALBP1Q15311 655 aa17.59■□□□□ 0.41
PMPCB-203ENST00000443722 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
PMPCB-203ENST00000443722 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
PMPCB-203ENST00000443722 CHD4Q14839 1912 aa17.58■□□□□ 0.41
PMPCB-203ENST00000443722 KCNA3P22001 575 aa17.58■□□□□ 0.4
PMPCB-203ENST00000443722 CHRNA5P30532 468 aa17.58■□□□□ 0.4
PMPCB-203ENST00000443722 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
PMPCB-203ENST00000443722 NEFMP07197 916 aa17.57■□□□□ 0.4
PMPCB-203ENST00000443722 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
PMPCB-203ENST00000443722 TEX13AQ9BXU3 409 aaPredicted RBP17.57■□□□□ 0.4
PMPCB-203ENST00000443722 N4BP2Q86UW6 1770 aaPredicted RBP17.56■□□□□ 0.4
PMPCB-203ENST00000443722 NFE2L2Q16236 605 aa17.56■□□□□ 0.4
PMPCB-203ENST00000443722 MAPK8IP3Q9UPT6 1336 aa17.56■□□□□ 0.4
PMPCB-203ENST00000443722 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
PMPCB-203ENST00000443722 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
PMPCB-203ENST00000443722 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
PMPCB-203ENST00000443722 KIAA1551Q9HCM1 1747 aa17.55■□□□□ 0.4
PMPCB-203ENST00000443722 SERPINB2P05120 415 aa17.54■□□□□ 0.4
PMPCB-203ENST00000443722 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
PMPCB-203ENST00000443722 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
PMPCB-203ENST00000443722 CCDC146Q8IYE0 955 aa17.54■□□□□ 0.4
PMPCB-203ENST00000443722 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
PMPCB-203ENST00000443722 A0A087WZG4 1122 aa17.53■□□□□ 0.4
PMPCB-203ENST00000443722 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
PMPCB-203ENST00000443722 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
PMPCB-203ENST00000443722 PIM2Q9P1W9 311 aa17.52■□□□□ 0.4
PMPCB-203ENST00000443722 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.4
PMPCB-203ENST00000443722 ATP10DQ9P241 1426 aa17.52■□□□□ 0.4
PMPCB-203ENST00000443722 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.39
PMPCB-203ENST00000443722 NBPF26B4DH59 902 aa17.51■□□□□ 0.39
PMPCB-203ENST00000443722 CAMTA2O94983 1202 aa17.51■□□□□ 0.39
PMPCB-203ENST00000443722 NBPF10Q6P3W6 841 aaKnown RBP17.51■□□□□ 0.39
PMPCB-203ENST00000443722 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
PMPCB-203ENST00000443722 DZIP3Q86Y13 1208 aaKnown RBP17.51■□□□□ 0.39
PMPCB-203ENST00000443722 NBPF15Q8N660 670 aa17.51■□□□□ 0.39
PMPCB-203ENST00000443722 RIPK4P57078 832 aa17.5■□□□□ 0.39
PMPCB-203ENST00000443722 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
PMPCB-203ENST00000443722 PNNQ9H307 717 aaKnown RBP17.5■□□□□ 0.39
PMPCB-203ENST00000443722 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
PMPCB-203ENST00000443722 EIF4A1P60842 406 aaKnown RBP17.48■□□□□ 0.39
PMPCB-203ENST00000443722 NGEFQ8N5V2 710 aa17.48■□□□□ 0.39
PMPCB-203ENST00000443722 PRKRIP1Q9H875 184 aaPredicted RBP17.48■□□□□ 0.39
PMPCB-203ENST00000443722 GIGYF1O75420 1035 aaPredicted RBP17.47■□□□□ 0.39
PMPCB-203ENST00000443722 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
PMPCB-203ENST00000443722 ADAMTS8Q9UP79 889 aa17.47■□□□□ 0.39
PMPCB-203ENST00000443722 ADCY9O60503 1353 aa17.47■□□□□ 0.39
PMPCB-203ENST00000443722 C1QTNF8P60827 252 aa17.47■□□□□ 0.39
PMPCB-203ENST00000443722 WDR43Q15061 677 aaKnown RBP eCLIP17.47■□□□□ 0.39
PMPCB-203ENST00000443722 PRR5LQ6MZQ0 368 aa17.47■□□□□ 0.39
PMPCB-203ENST00000443722 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
PMPCB-203ENST00000443722 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
PMPCB-203ENST00000443722 DLG5Q8TDM6 1919 aa17.46■□□□□ 0.39
PMPCB-203ENST00000443722 PNISRQ8TF01 805 aaKnown RBP17.46■□□□□ 0.38
PMPCB-203ENST00000443722 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.38
PMPCB-203ENST00000443722 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.38
PMPCB-203ENST00000443722 AFDNP55196 1824 aaKnown RBP17.45■□□□□ 0.38
PMPCB-203ENST00000443722 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
PMPCB-203ENST00000443722 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
PMPCB-203ENST00000443722 H0YIN7 160 aa17.44■□□□□ 0.38
PMPCB-203ENST00000443722 NPHP1O15259 732 aa17.44■□□□□ 0.38
PMPCB-203ENST00000443722 MYL6BP14649 208 aa17.44■□□□□ 0.38
PMPCB-203ENST00000443722 HLFQ16534 295 aa17.44■□□□□ 0.38
PMPCB-203ENST00000443722 NRXN2Q9P2S2 1712 aa17.43■□□□□ 0.38
PMPCB-203ENST00000443722 C9orf131Q5VYM1 1079 aa17.43■□□□□ 0.38
PMPCB-203ENST00000443722 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
PMPCB-203ENST00000443722 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
PMPCB-203ENST00000443722 BRCA1P38398 1863 aaKnown RBP17.43■□□□□ 0.38
PMPCB-203ENST00000443722 RASSF7Q02833 373 aa17.42■□□□□ 0.38
PMPCB-203ENST00000443722 TTLL7Q6ZT98 887 aa17.42■□□□□ 0.38
PMPCB-203ENST00000443722 TTLL6Q8N841 843 aa17.42■□□□□ 0.38
PMPCB-203ENST00000443722 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.384e-7■□□□□ 9.1
PMPCB-203ENST00000443722 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
PMPCB-203ENST00000443722 BRIP1Q9BX63 1249 aa17.42■□□□□ 0.38
PMPCB-203ENST00000443722 NIP7Q9Y221 180 aaKnown RBP eCLIP17.42■□□□□ 0.38
PMPCB-203ENST00000443722 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
PMPCB-203ENST00000443722 EIF2S2P20042 333 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms