RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PALD1Q9ULE6 856 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 TRIM66O15016 1216 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 RBM6P78332 1123 aaKnown RBP5.88□□□□□ -1.47
HERC1-201ENST00000443617 MKRN1Q9UHC7 482 aaKnown RBP5.88□□□□□ -1.47
HERC1-201ENST00000443617 KIAA0586Q9BVV6 1533 aa5.88□□□□□ -1.47
HERC1-201ENST00000443617 ERLIN1O75477 346 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 RGS22Q8NE09 1264 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 ABCC4O15439 1325 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 ANKRD1Q15327 319 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 PHACTR3Q96KR7 559 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 FMNL2Q96PY5 1086 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 EXOC6BQ9Y2D4 811 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 KIF3BO15066 747 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 NUTM2DQ5VT03 806 aaPredicted RBP5.87□□□□□ -1.47
HERC1-201ENST00000443617 JAKMIP3Q5VZ66 844 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
HERC1-201ENST00000443617 MCM6Q14566 821 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 VPS53Q5VIR6 699 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 ORC3Q9UBD5 711 aaPredicted RBP5.87□□□□□ -1.47
HERC1-201ENST00000443617 CLCN6P51797 869 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 CWC27Q6UX04 472 aaKnown RBP5.87□□□□□ -1.47
HERC1-201ENST00000443617 LRRC8AQ8IWT6 810 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 NECAB1Q8N987 351 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 DDX54Q8TDD1 881 aaKnown RBP5.87□□□□□ -1.47
HERC1-201ENST00000443617 DNAI1Q9UI46 699 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 MTMR6Q9Y217 621 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 FHOD1Q9Y613 1164 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 TOPBP1Q92547 1522 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 EIF3JO75822 258 aaKnown RBP5.87□□□□□ -1.47
HERC1-201ENST00000443617 CARMIL2Q6F5E8 1435 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 ZSCAN12O43309 604 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 SKIDA1Q1XH10 827 aa5.87□□□□□ -1.47
HERC1-201ENST00000443617 ADGRF5Q8IZF2 1346 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 RAB11FIP3O75154 756 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 MNAT1P51948 309 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 FOSBP53539 338 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 RRP15Q9Y3B9 282 aaKnown RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 HDXQ7Z353 690 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 PPM1EQ8WY54 764 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 EXOC4Q96A65 974 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 HSPA4P34932 840 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 HSP90AB4PQ58FF6 505 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 NUTM1Q86Y26 1132 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 ATP8B1O43520 1251 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 CCAR1Q8IX12 1150 aaKnown RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 RAD51AP2Q09MP3 1159 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 SMC1AQ14683 1233 aaKnown RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 CBFA2T2O43439 604 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 MYO1CO00159 1063 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 MAP4K4O95819 1239 aaPredicted RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 IFIT2P09913 472 aaKnown RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 USP8P40818 1118 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 TMC6Q7Z403 805 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 ME1P48163 572 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 PUS7Q96PZ0 661 aaKnown RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 OAS2P29728 719 aaKnown RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 TTLL5Q6EMB2 1281 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 A2MP01023 1474 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 GNG11P61952 73 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 ATP8B2P98198 1209 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 ERCC4Q92889 916 aaPredicted RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 MRFAP1L1Q96HT8 127 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 HYPKQ9NX55 129 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 ZNF608Q9ULD9 1512 aaPredicted RBP5.86□□□□□ -1.47
HERC1-201ENST00000443617 NCAPGQ9BPX3 1015 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 SPG7Q9UQ90 795 aa5.86□□□□□ -1.47
HERC1-201ENST00000443617 LIG1P18858 919 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 ARID5BQ14865 1188 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 MAGI3Q5TCQ9 1506 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 DDX11Q96FC9 970 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 KIF24Q5T7B8 1368 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 UBTFL1P0CB47 393 aaPredicted RBP5.85□□□□□ -1.47
HERC1-201ENST00000443617 MEIS3Q99687 375 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 GRIN2AQ12879 1464 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 PLA2G4DQ86XP0 818 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 CCDC102AQ96A19 550 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 C14orf93Q9H972 538 aaKnown RBP5.85□□□□□ -1.47
HERC1-201ENST00000443617 PDE11AQ9HCR9 933 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 MAGEA9P43362 315 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 NYAP1Q6ZVC0 841 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 ATAD2Q6PL18 1390 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 LEO1Q8WVC0 666 aaPredicted RBP5.85□□□□□ -1.47
HERC1-201ENST00000443617 GOLGA1Q92805 767 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 DHX16O60231 1041 aaKnown RBP5.85□□□□□ -1.47
HERC1-201ENST00000443617 ANKRD20A12PQ8NF67 263 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 MIS18AQ9NYP9 233 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 NSD2O96028 1365 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 PPP2R3AQ06190 1150 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 AOX1Q06278 1338 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 HMGXB3Q12766 1538 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 BRD3Q15059 726 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 DNAJC21Q5F1R6 531 aaKnown RBP5.85□□□□□ -1.47
HERC1-201ENST00000443617 VPS18Q9P253 973 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 TXLNAP40222 546 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 ZCCHC17Q9NP64 241 aaKnown RBP5.85□□□□□ -1.47
HERC1-201ENST00000443617 CABP1Q9NZU7 370 aa5.85□□□□□ -1.47
HERC1-201ENST00000443617 CCDC141Q6ZP82 1450 aa5.84□□□□□ -1.47
HERC1-201ENST00000443617 GPR161Q8N6U8 529 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms