RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 LGR6Q9HBX8 967 aa28.36■■■□□ 2.13
POLR2J3-202ENST00000443430 CYP19A1P11511 503 aaPredicted RBP28.35■■■□□ 2.13
POLR2J3-202ENST00000443430 NFIXQ14938 502 aa28.35■■■□□ 2.13
POLR2J3-202ENST00000443430 SMC1BQ8NDV3 1235 aa28.35■■■□□ 2.13
POLR2J3-202ENST00000443430 NARFQ9UHQ1 456 aa28.35■■■□□ 2.13
POLR2J3-202ENST00000443430 HSPA5P11021 654 aaKnown RBP28.34■■■□□ 2.13
POLR2J3-202ENST00000443430 ZC3H4Q9UPT8 1303 aaKnown RBP28.34■■■□□ 2.13
POLR2J3-202ENST00000443430 NRXN2Q9P2S2 1712 aa28.33■■■□□ 2.13
POLR2J3-202ENST00000443430 EIF4G2P78344 907 aaKnown RBP eCLIP28.33■■■□□ 2.13
POLR2J3-202ENST00000443430 SLC39A6Q13433 755 aa28.33■■■□□ 2.13
POLR2J3-202ENST00000443430 PCNTO95613 3336 aa28.33■■■□□ 2.13
POLR2J3-202ENST00000443430 PRELPP51888 382 aa28.32■■■□□ 2.12
POLR2J3-202ENST00000443430 VIRMAQ69YN4 1812 aaKnown RBP28.32■■■□□ 2.12
POLR2J3-202ENST00000443430 BCL2L12Q9HB09 334 aa28.31■■■□□ 2.12
POLR2J3-202ENST00000443430 ZBTB1Q9Y2K1 713 aa28.31■■■□□ 2.12
POLR2J3-202ENST00000443430 DLEC1Q9Y238 1755 aa28.3■■■□□ 2.12
POLR2J3-202ENST00000443430 MRC1P22897 1456 aa28.3■■■□□ 2.12
POLR2J3-202ENST00000443430 COL15A1P39059 1388 aa28.3■■■□□ 2.12
POLR2J3-202ENST00000443430 RNMTO43148 476 aaKnown RBP28.3■■■□□ 2.12
POLR2J3-202ENST00000443430 SERPINB2P05120 415 aa28.3■■■□□ 2.12
POLR2J3-202ENST00000443430 LMNB1P20700 586 aa28.3■■■□□ 2.12
POLR2J3-202ENST00000443430 CCDC88AQ3V6T2 1871 aa28.29■■■□□ 2.12
POLR2J3-202ENST00000443430 GLTPD2A6NH11 291 aa28.29■■■□□ 2.12
POLR2J3-202ENST00000443430 VEGFAP15692 232 aaPredicted RBP28.27■■■□□ 2.12
POLR2J3-202ENST00000443430 TTLL6Q8N841 843 aa28.27■■■□□ 2.12
POLR2J3-202ENST00000443430 CLSPNQ9HAW4 1339 aa28.26■■■□□ 2.11
POLR2J3-202ENST00000443430 KNSTRNQ9Y448 316 aa28.26■■■□□ 2.11
POLR2J3-202ENST00000443430 C2CD5Q86YS7 1000 aa28.25■■■□□ 2.11
POLR2J3-202ENST00000443430 HMOX1P09601 288 aa28.24■■■□□ 2.11
POLR2J3-202ENST00000443430 VSIG10Q8N0Z9 540 aa28.24■■■□□ 2.11
POLR2J3-202ENST00000443430 CARMIL3Q8ND23 1372 aa28.24■■■□□ 2.11
POLR2J3-202ENST00000443430 NFKBIEO00221 500 aa28.23■■■□□ 2.11
POLR2J3-202ENST00000443430 H0YIN7 160 aa28.22■■■□□ 2.11
POLR2J3-202ENST00000443430 MTHFSDQ2M296 383 aaKnown RBP28.22■■■□□ 2.11
POLR2J3-202ENST00000443430 AMER1Q5JTC6 1135 aaPredicted RBP28.22■■■□□ 2.11
POLR2J3-202ENST00000443430 TIAM2Q8IVF5 1701 aa28.22■■■□□ 2.11
POLR2J3-202ENST00000443430 CANXP27824 592 aaKnown RBP28.21■■■□□ 2.11
POLR2J3-202ENST00000443430 UBR2Q8IWV8 1755 aa28.2■■■□□ 2.11
POLR2J3-202ENST00000443430 POTECB2RU33 542 aa28.2■■■□□ 2.1
POLR2J3-202ENST00000443430 TNS4Q8IZW8 715 aa28.2■■■□□ 2.1
POLR2J3-202ENST00000443430 EIF5P55010 431 aaKnown RBP28.19■■■□□ 2.1
POLR2J3-202ENST00000443430 BICDL1Q6ZP65 573 aa28.19■■■□□ 2.1
POLR2J3-202ENST00000443430 CAPN15O75808 1086 aa28.18■■■□□ 2.1
POLR2J3-202ENST00000443430 ANKRD31Q8N7Z5 1873 aa28.17■■■□□ 2.1
POLR2J3-202ENST00000443430 PCGF6Q9BYE7 350 aa28.16■■■□□ 2.1
POLR2J3-202ENST00000443430 STARD3NLO95772 234 aa28.15■■■□□ 2.1
POLR2J3-202ENST00000443430 HSPA1AP0DMV8 641 aaKnown RBP28.15■■■□□ 2.1
POLR2J3-202ENST00000443430 HSPA1BP0DMV9 641 aaKnown RBP28.15■■■□□ 2.1
POLR2J3-202ENST00000443430 TBC1D9BQ66K14 1250 aa28.15■■■□□ 2.1
POLR2J3-202ENST00000443430 DICER1Q9UPY3 1922 aaKnown RBP28.14■■■□□ 2.1
POLR2J3-202ENST00000443430 A0A087WZG4 1122 aa28.14■■■□□ 2.1
POLR2J3-202ENST00000443430 ZNF622Q969S3 477 aaKnown RBP eCLIP28.14■■■□□ 2.1
POLR2J3-202ENST00000443430 FER1L6Q2WGJ9 1857 aa28.13■■■□□ 2.09
POLR2J3-202ENST00000443430 DPY19L2Q6NUT2 758 aa28.13■■■□□ 2.09
POLR2J3-202ENST00000443430 BRIP1Q9BX63 1249 aa28.13■■■□□ 2.09
POLR2J3-202ENST00000443430 TTC5Q8N0Z6 440 aa28.12■■■□□ 2.09
POLR2J3-202ENST00000443430 PDZRN3Q9UPQ7 1066 aa28.12■■■□□ 2.09
POLR2J3-202ENST00000443430 C21orf2O43822 256 aa28.11■■■□□ 2.09
POLR2J3-202ENST00000443430 DIAPH1O60610 1272 aaKnown RBP28.11■■■□□ 2.09
POLR2J3-202ENST00000443430 ZNF496Q96IT1 587 aaPredicted RBP28.11■■■□□ 2.09
POLR2J3-202ENST00000443430 ZNF219Q9P2Y4 722 aaPredicted RBP28.11■■■□□ 2.09
POLR2J3-202ENST00000443430 PDE6BP35913 854 aa28.1■■■□□ 2.09
POLR2J3-202ENST00000443430 PRR5LQ6MZQ0 368 aa28.1■■■□□ 2.09
POLR2J3-202ENST00000443430 CCDC24Q8N4L8 307 aa28.1■■■□□ 2.09
POLR2J3-202ENST00000443430 COL11A2P13942 1736 aaPredicted RBP28.09■■■□□ 2.09
POLR2J3-202ENST00000443430 ERFEQ4G0M1 354 aa28.09■■■□□ 2.09
POLR2J3-202ENST00000443430 TBC1D2BQ9UPU7 963 aa28.09■■■□□ 2.09
POLR2J3-202ENST00000443430 SCN7AQ01118 1682 aa28.09■■■□□ 2.09
POLR2J3-202ENST00000443430 HEG1Q9ULI3 1381 aa28.08■■■□□ 2.09
POLR2J3-202ENST00000443430 ZNF790Q6PG37 636 aa28.07■■■□□ 2.08
POLR2J3-202ENST00000443430 IL17REQ8NFR9 667 aa28.07■■■□□ 2.08
POLR2J3-202ENST00000443430 TEX13AQ9BXU3 409 aaPredicted RBP28.07■■■□□ 2.08
POLR2J3-202ENST00000443430 IL6STP40189 918 aaPredicted RBP28.06■■■□□ 2.08
POLR2J3-202ENST00000443430 ZNF330Q9Y3S2 320 aaPredicted RBP28.06■■■□□ 2.08
POLR2J3-202ENST00000443430 SLX4Q8IY92 1834 aa28.05■■■□□ 2.08
POLR2J3-202ENST00000443430 LTBP3Q9NS15 1303 aa28.05■■■□□ 2.08
POLR2J3-202ENST00000443430 PER1O15534 1290 aaPredicted RBP28.04■■■□□ 2.08
POLR2J3-202ENST00000443430 TEFQ10587 303 aa28.04■■■□□ 2.08
POLR2J3-202ENST00000443430 TAOK3Q9H2K8 898 aa28.04■■■□□ 2.08
POLR2J3-202ENST00000443430 SIPA1L3O60292 1781 aaPredicted RBP28.04■■■□□ 2.08
POLR2J3-202ENST00000443430 KIF7Q2M1P5 1343 aa28.03■■■□□ 2.08
POLR2J3-202ENST00000443430 CHADLQ6NUI6 762 aa28.03■■■□□ 2.08
POLR2J3-202ENST00000443430 GNAT3A8MTJ3 354 aa28.02■■■□□ 2.08
POLR2J3-202ENST00000443430 CREBZFQ9NS37 354 aa28.02■■■□□ 2.08
POLR2J3-202ENST00000443430 CACNA1SQ13698 1873 aa28.02■■■□□ 2.08
POLR2J3-202ENST00000443430 DDNO94850 711 aaPredicted RBP28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 CAMTA2O94983 1202 aa28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 A1BGP04217 495 aa28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 POTEIP0CG38 1075 aa28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 POTEJP0CG39 1038 aa28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 CC2D1BQ5T0F9 858 aaKnown RBP28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 CNBD1Q8NA66 436 aa28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 CNKSR1Q969H4 720 aa28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 SETDB2Q96T68 719 aa28.01■■■□□ 2.07
POLR2J3-202ENST00000443430 SRGNP10124 158 aa28■■■□□ 2.07
POLR2J3-202ENST00000443430 STYK1Q6J9G0 422 aa28■■■□□ 2.07
POLR2J3-202ENST00000443430 GAS2L2Q8NHY3 880 aa28■■■□□ 2.07
POLR2J3-202ENST00000443430 PRPF40BQ6NWY9 871 aaKnown RBP27.99■■■□□ 2.07
POLR2J3-202ENST00000443430 FMNL2Q96PY5 1086 aa27.99■■■□□ 2.07
POLR2J3-202ENST00000443430 MKRN1Q9UHC7 482 aaKnown RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms