RNA–Protein interactions for RNA: ENST00000443213.5

SRSF7-208, Transcript of serine and arginine rich splicing factor 7, human

TSL 5

Gene SRSF7, Length 1,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF7-208	ENST00000443213	TNS1	Q9HBL0	1735 aa	Known RBP	13.68	□□□□□ -0.22
SRSF7-208	ENST00000443213	PRAMEF22	A3QJZ6	481 aa		13.68	□□□□□ -0.22
SRSF7-208	ENST00000443213	VAMP4	O75379	141 aa		13.68	□□□□□ -0.22
SRSF7-208	ENST00000443213	GIGYF1	O75420	1035 aa	Predicted RBP	13.68	□□□□□ -0.22
SRSF7-208	ENST00000443213	HEG1	Q9ULI3	1381 aa		13.67	□□□□□ -0.22
SRSF7-208	ENST00000443213	KDM3B	Q7LBC6	1761 aa		13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	PALLD	Q8WX93	1383 aa		13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	SNRPA1	P09661	255 aa	Known RBP	13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	NECTIN2	Q92692	538 aa		13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	SMARCC1	Q92922	1105 aa	Predicted RBP	13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	SLC4A9	Q96Q91	983 aa		13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	RCAN3	Q9UKA8	241 aa		13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	PAPPA	Q13219	1627 aa		13.66	□□□□□ -0.22
SRSF7-208	ENST00000443213	TCERG1	O14776	1098 aa	Known RBP	13.65	□□□□□ -0.22
SRSF7-208	ENST00000443213	CT47B1	P0C2W7	299 aa	Predicted RBP	13.65	□□□□□ -0.22
SRSF7-208	ENST00000443213	EIF2S2	P20042	333 aa	Known RBP	13.65	□□□□□ -0.22
SRSF7-208	ENST00000443213	UBR2	Q8IWV8	1755 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	LOC102724428	A0A0B4J2F2	783 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	SIK1	P57059	783 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	BCL2L13	Q9BXK5	485 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	USP16	Q9Y5T5	823 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	KCP	Q6ZWJ8	1503 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	SPDYE4	A6NLX3	237 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	HOXB7	P09629	217 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	RARS	P54136	660 aa	Known RBP	13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	HDGFL1	Q5TGJ6	251 aa		13.64	□□□□□ -0.23
SRSF7-208	ENST00000443213	APBA3	O96018	575 aa		13.63	□□□□□ -0.23
SRSF7-208	ENST00000443213	ATP6V1A	P38606	617 aa		13.63	□□□□□ -0.23
SRSF7-208	ENST00000443213	KCNQ4	P56696	695 aa		13.63	□□□□□ -0.23
SRSF7-208	ENST00000443213	VSIG10	Q8N0Z9	540 aa		13.63	□□□□□ -0.23
SRSF7-208	ENST00000443213	BCAR3	O75815	825 aa		13.62	□□□□□ -0.23
SRSF7-208	ENST00000443213	DNAJC10	Q8IXB1	793 aa		13.62	□□□□□ -0.23
SRSF7-208	ENST00000443213	SSH1	Q8WYL5	1049 aa		13.62	□□□□□ -0.23
SRSF7-208	ENST00000443213	ZNF428	Q96B54	188 aa		13.62	□□□□□ -0.23
SRSF7-208	ENST00000443213	SOS1	Q07889	1333 aa	Predicted RBP	13.62	□□□□□ -0.23
SRSF7-208	ENST00000443213	CCDC30	Q5VVM6	783 aa		13.62	□□□□□ -0.23
SRSF7-208	ENST00000443213	LY75	O60449	1722 aa		13.61	□□□□□ -0.23
SRSF7-208	ENST00000443213	C5	P01031	1676 aa		13.61	□□□□□ -0.23
SRSF7-208	ENST00000443213	SMC4	Q9NTJ3	1288 aa		13.61	□□□□□ -0.23
SRSF7-208	ENST00000443213	MYH14	Q7Z406	1995 aa	Known RBP	13.61	□□□□□ -0.23
SRSF7-208	ENST00000443213	ITPK1	Q13572	414 aa		13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	CCNL1	Q9UK58	526 aa	Predicted RBP	13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	TAF1L	Q8IZX4	1826 aa		13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	STARD3NL	O95772	234 aa		13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	PIP4K2A	P48426	406 aa	Predicted RBP	13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	ALDH1L2	Q3SY69	923 aa		13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	CHPF2	Q9P2E5	772 aa		13.6	□□□□□ -0.23
SRSF7-208	ENST00000443213	PLSCR1	O15162	318 aa		13.59	□□□□□ -0.23
SRSF7-208	ENST00000443213	A1BG	P04217	495 aa		13.59	□□□□□ -0.23
SRSF7-208	ENST00000443213	STK31	Q9BXU1	1019 aa		13.59	□□□□□ -0.23
SRSF7-208	ENST00000443213	CHMP4A	Q9BY43	222 aa		13.59	□□□□□ -0.23
SRSF7-208	ENST00000443213	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.59	□□□□□ -0.23
SRSF7-208	ENST00000443213	ANXA1	P04083	346 aa		13.58	□□□□□ -0.23
SRSF7-208	ENST00000443213	CYP19A1	P11511	503 aa	Predicted RBP	13.58	□□□□□ -0.23
SRSF7-208	ENST00000443213	PROM2	Q8N271	834 aa		13.58	□□□□□ -0.23
SRSF7-208	ENST00000443213	LRRC4B	Q9NT99	713 aa		13.58	□□□□□ -0.23
SRSF7-208	ENST00000443213	DBF4	Q9UBU7	674 aa	Predicted RBP	13.58	□□□□□ -0.23
SRSF7-208	ENST00000443213	MYL6B	P14649	208 aa		13.58	□□□□□ -0.24
SRSF7-208	ENST00000443213	PDIA6	Q15084	440 aa		13.58	□□□□□ -0.24
SRSF7-208	ENST00000443213	PROSER3	Q2NL68	480 aa		13.58	□□□□□ -0.24
SRSF7-208	ENST00000443213	MRPL50	Q8N5N7	158 aa	Known RBP	13.58	□□□□□ -0.24
SRSF7-208	ENST00000443213	TJP1	Q07157	1748 aa		13.58	□□□□□ -0.24
SRSF7-208	ENST00000443213	SF3B2	Q13435	895 aa	Known RBP	13.57	□□□□□ -0.24
SRSF7-208	ENST00000443213	TXNRD1	Q16881	649 aa		13.57	□□□□□ -0.24
SRSF7-208	ENST00000443213	DEFB132	Q7Z7B7	95 aa		13.57	□□□□□ -0.24
SRSF7-208	ENST00000443213	LINC00116	Q8NCU8	138 aa		13.57	□□□□□ -0.24
SRSF7-208	ENST00000443213	FRAT1	Q92837	279 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF7-208	ENST00000443213	NBPF26	B4DH59	902 aa		13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	EN1	Q05925	392 aa	Predicted RBP	13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	SLC27A3	Q5K4L6	730 aa		13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	NBPF14	Q5TI25	921 aa		13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	NBPF10	Q6P3W6	841 aa	Known RBP	13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	NBPF15	Q8N660	670 aa		13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	NOB1	Q9ULX3	412 aa	Known RBP	13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	PLIN1	O60240	522 aa		13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	CRKL	P46109	303 aa	Known RBP	13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	G2E3	Q7L622	706 aa		13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	PHAX	Q9H814	394 aa	Known RBP	13.56	□□□□□ -0.24
SRSF7-208	ENST00000443213	CANX	P27824	592 aa	Known RBP	13.55	□□□□□ -0.24
SRSF7-208	ENST00000443213	BRPF1	P55201	1214 aa	Predicted RBP	13.55	□□□□□ -0.24
SRSF7-208	ENST00000443213	INTS5	Q6P9B9	1019 aa	Known RBP	13.55	□□□□□ -0.24
SRSF7-208	ENST00000443213	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SRSF7-208	ENST00000443213	ZBTB1	Q9Y2K1	713 aa		13.55	□□□□□ -0.24
SRSF7-208	ENST00000443213	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.55	□□□□□ -0.24
SRSF7-208	ENST00000443213	COL5A3	P25940	1745 aa	Predicted RBP	13.55	□□□□□ -0.24
SRSF7-208	ENST00000443213	LRP10	Q7Z4F1	713 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	HYPK	Q9NX55	129 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	SRCAP	Q6ZRS2	3230 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	FLII	Q13045	1269 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	EZH2	Q15910	746 aa	Known RBP	13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	CCDC125	Q86Z20	511 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	CAMKK2	Q96RR4	588 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	CCDC87	Q9NVE4	849 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	ERBB4	Q15303	1308 aa		13.54	□□□□□ -0.24
SRSF7-208	ENST00000443213	BAG6	P46379	1132 aa		13.53	□□□□□ -0.24
SRSF7-208	ENST00000443213	RRP1	P56182	461 aa	Known RBP	13.53	□□□□□ -0.24
SRSF7-208	ENST00000443213	AIMP1	Q12904	312 aa	Known RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms