RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 C4AP0C0L4 1744 aa27.87■■■□□ 2.05
CDKN3-204ENST00000442975 YY1P25490 414 aa27.87■■■□□ 2.05
CDKN3-204ENST00000442975 CANXP27824 592 aaKnown RBP27.87■■■□□ 2.05
CDKN3-204ENST00000442975 PRKRIP1Q9H875 184 aaPredicted RBP27.87■■■□□ 2.05
CDKN3-204ENST00000442975 ZPR1O75312 459 aa27.85■■■□□ 2.05
CDKN3-204ENST00000442975 WDR43Q15061 677 aaKnown RBP eCLIP27.85■■■□□ 2.05
CDKN3-204ENST00000442975 FKBP8Q14318 412 aa27.84■■■□□ 2.05
CDKN3-204ENST00000442975 GOLGB1Q14789 3259 aaKnown RBP27.84■■■□□ 2.05
CDKN3-204ENST00000442975 TEX13AQ9BXU3 409 aaPredicted RBP27.83■■■□□ 2.05
CDKN3-204ENST00000442975 ZNF330Q9Y3S2 320 aaPredicted RBP27.83■■■□□ 2.05
CDKN3-204ENST00000442975 USPL1Q5W0Q7 1092 aa27.82■■■□□ 2.04
CDKN3-204ENST00000442975 THUMPD2Q9BTF0 503 aaKnown RBP27.82■■■□□ 2.04
CDKN3-204ENST00000442975 WWC3Q9ULE0 1092 aa27.82■■■□□ 2.04
CDKN3-204ENST00000442975 PARP3Q9Y6F1 533 aa27.82■■■□□ 2.04
CDKN3-204ENST00000442975 TAF7Q15545 349 aaPredicted RBP27.8■■■□□ 2.04
CDKN3-204ENST00000442975 CCDC146Q8IYE0 955 aa27.8■■■□□ 2.04
CDKN3-204ENST00000442975 MIS18AQ9NYP9 233 aa27.8■■■□□ 2.04
CDKN3-204ENST00000442975 YBX3P16989 372 aaKnown RBP eCLIP27.79■■■□□ 2.041e-6■■□□□ 14.5
CDKN3-204ENST00000442975 C10orf71Q711Q0 1435 aa27.78■■■□□ 2.04
CDKN3-204ENST00000442975 NARFQ9UHQ1 456 aa27.78■■■□□ 2.04
CDKN3-204ENST00000442975 PRAMEF22A3QJZ6 481 aa27.77■■■□□ 2.04
CDKN3-204ENST00000442975 ZNF316A6NFI3 1004 aaPredicted RBP27.77■■■□□ 2.04
CDKN3-204ENST00000442975 DDR1Q08345 913 aa27.77■■■□□ 2.04
CDKN3-204ENST00000442975 A1BGP04217 495 aa27.76■■■□□ 2.03
CDKN3-204ENST00000442975 SNRPA1P09661 255 aaKnown RBP27.76■■■□□ 2.03
CDKN3-204ENST00000442975 RIPK4P57078 832 aa27.76■■■□□ 2.03
CDKN3-204ENST00000442975 NPM2Q86SE8 214 aaKnown RBP27.76■■■□□ 2.03
CDKN3-204ENST00000442975 A0A087WZG4 1122 aa27.75■■■□□ 2.03
CDKN3-204ENST00000442975 EIF5P55010 431 aaKnown RBP27.75■■■□□ 2.03
CDKN3-204ENST00000442975 PNISRQ8TF01 805 aaKnown RBP27.75■■■□□ 2.03
CDKN3-204ENST00000442975 RRP7AQ9Y3A4 280 aaKnown RBP27.75■■■□□ 2.03
CDKN3-204ENST00000442975 PXDNLA1KZ92 1463 aa27.73■■■□□ 2.03
CDKN3-204ENST00000442975 PIP4K2AP48426 406 aaPredicted RBP27.73■■■□□ 2.03
CDKN3-204ENST00000442975 USP16Q9Y5T5 823 aa27.73■■■□□ 2.03
CDKN3-204ENST00000442975 GRIN3BO60391 1043 aa27.72■■■□□ 2.03
CDKN3-204ENST00000442975 IL6STP40189 918 aaPredicted RBP27.72■■■□□ 2.03
CDKN3-204ENST00000442975 TMPOP42166 694 aaKnown RBP27.72■■■□□ 2.03
CDKN3-204ENST00000442975 LMOD3Q0VAK6 560 aa27.72■■■□□ 2.03
CDKN3-204ENST00000442975 NEUROD2Q15784 382 aa27.72■■■□□ 2.03
CDKN3-204ENST00000442975 POLRMTO00411 1230 aaKnown RBP27.71■■■□□ 2.03
CDKN3-204ENST00000442975 BCL2L12Q9HB09 334 aa27.71■■■□□ 2.03
CDKN3-204ENST00000442975 ADAMTS8Q9UP79 889 aa27.71■■■□□ 2.03
CDKN3-204ENST00000442975 TBC1D2BQ9UPU7 963 aa27.71■■■□□ 2.03
CDKN3-204ENST00000442975 NFIXQ14938 502 aa27.7■■■□□ 2.02
CDKN3-204ENST00000442975 RUNDC1Q96C34 613 aa27.7■■■□□ 2.02
CDKN3-204ENST00000442975 DLG5Q8TDM6 1919 aa27.69■■■□□ 2.02
CDKN3-204ENST00000442975 BICDL1Q6ZP65 573 aa27.69■■■□□ 2.02
CDKN3-204ENST00000442975 A0A0G2JLW4 131 aa27.68■■■□□ 2.02
CDKN3-204ENST00000442975 TM4SF1P30408 202 aa27.68■■■□□ 2.02
CDKN3-204ENST00000442975 TGFB2P61812 414 aa27.68■■■□□ 2.02
CDKN3-204ENST00000442975 TSPYL4Q9UJ04 414 aa27.68■■■□□ 2.02
CDKN3-204ENST00000442975 DPEP1P16444 411 aa27.66■■■□□ 2.02
CDKN3-204ENST00000442975 EIF4A1P60842 406 aaKnown RBP27.65■■■□□ 2.02
CDKN3-204ENST00000442975 DZIP3Q86Y13 1208 aaKnown RBP27.65■■■□□ 2.02
CDKN3-204ENST00000442975 SCN7AQ01118 1682 aa27.65■■■□□ 2.02
CDKN3-204ENST00000442975 KDM3BQ7LBC6 1761 aa27.64■■■□□ 2.02
CDKN3-204ENST00000442975 CAMTA2O94983 1202 aa27.63■■■□□ 2.01
CDKN3-204ENST00000442975 TBC1D9BQ66K14 1250 aa27.63■■■□□ 2.01
CDKN3-204ENST00000442975 BCS1LQ9Y276 419 aa27.63■■■□□ 2.01
CDKN3-204ENST00000442975 KIF13BQ9NQT8 1826 aa27.62■■■□□ 2.01
CDKN3-204ENST00000442975 NBPF26B4DH59 902 aa27.62■■■□□ 2.01
CDKN3-204ENST00000442975 GIGYF1O75420 1035 aaPredicted RBP27.62■■■□□ 2.01
CDKN3-204ENST00000442975 SERPINB2P05120 415 aa27.62■■■□□ 2.01
CDKN3-204ENST00000442975 NBPF10Q6P3W6 841 aaKnown RBP27.62■■■□□ 2.01
CDKN3-204ENST00000442975 NBPF15Q8N660 670 aa27.62■■■□□ 2.01
CDKN3-204ENST00000442975 KIAA1551Q9HCM1 1747 aa27.6■■■□□ 2.01
CDKN3-204ENST00000442975 CARMIL3Q8ND23 1372 aa27.6■■■□□ 2.01
CDKN3-204ENST00000442975 ANP32CO43423 234 aa27.59■■■□□ 2.01
CDKN3-204ENST00000442975 CHRNA5P30532 468 aa27.59■■■□□ 2.01
CDKN3-204ENST00000442975 LAS1LQ9Y4W2 734 aaKnown RBP27.59■■■□□ 2.01
CDKN3-204ENST00000442975 LAMB4A4D0S4 1761 aa27.58■■■□□ 2.01
CDKN3-204ENST00000442975 ZNF784Q8NCA9 323 aaPredicted RBP27.58■■■□□ 2.01
CDKN3-204ENST00000442975 TRIM35Q9UPQ4 493 aa27.58■■■□□ 2.01
CDKN3-204ENST00000442975 CCDC184Q52MB2 194 aa27.57■■■□□ 2
CDKN3-204ENST00000442975 NGEFQ8N5V2 710 aa27.57■■■□□ 2
CDKN3-204ENST00000442975 ZNF652Q9Y2D9 606 aa27.57■■■□□ 2
CDKN3-204ENST00000442975 N4BP2Q86UW6 1770 aaPredicted RBP27.57■■■□□ 2
CDKN3-204ENST00000442975 NPHP1O15259 732 aa27.56■■■□□ 2
CDKN3-204ENST00000442975 SETDB2Q96T68 719 aa27.56■■■□□ 2
CDKN3-204ENST00000442975 BABAM1Q9NWV8 329 aa27.55■■■□□ 2
CDKN3-204ENST00000442975 PIM2Q9P1W9 311 aa27.55■■■□□ 2
CDKN3-204ENST00000442975 APAF1O14727 1248 aa27.54■■■□□ 2
CDKN3-204ENST00000442975 MYL6BP14649 208 aa27.54■■■□□ 2
CDKN3-204ENST00000442975 KCNA3P22001 575 aa27.54■■■□□ 2
CDKN3-204ENST00000442975 CCDC24Q8N4L8 307 aa27.53■■■□□ 2
CDKN3-204ENST00000442975 CNBD1Q8NA66 436 aa27.53■■■□□ 2
CDKN3-204ENST00000442975 BCORQ6W2J9 1755 aa27.53■■■□□ 2
CDKN3-204ENST00000442975 CHD4Q14839 1912 aa27.52■■■□□ 2
CDKN3-204ENST00000442975 EIF2S2P20042 333 aaKnown RBP27.52■■■□□ 2
CDKN3-204ENST00000442975 DALRD3Q5D0E6 543 aaKnown RBP27.52■■■□□ 2
CDKN3-204ENST00000442975 MRS2Q9HD23 443 aa27.52■■■□□ 2
CDKN3-204ENST00000442975 NRXN2Q9P2S2 1712 aa27.51■■□□□ 1.99
CDKN3-204ENST00000442975 PRR5LQ6MZQ0 368 aa27.51■■□□□ 1.99
CDKN3-204ENST00000442975 CLEC4GQ6UXB4 293 aa27.5■■□□□ 1.99
CDKN3-204ENST00000442975 KIF6Q6ZMV9 814 aa27.5■■□□□ 1.99
CDKN3-204ENST00000442975 C2CD5Q86YS7 1000 aa27.5■■□□□ 1.99
CDKN3-204ENST00000442975 ARHGAP27Q6ZUM4 889 aa27.49■■□□□ 1.99
CDKN3-204ENST00000442975 NIP7Q9Y221 180 aaKnown RBP eCLIP27.49■■□□□ 1.99
CDKN3-204ENST00000442975 AFDNP55196 1824 aaKnown RBP27.48■■□□□ 1.99
CDKN3-204ENST00000442975 ERBB4Q15303 1308 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms