RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 PXDNLA1KZ92 1463 aa19.26■□□□□ 0.67
PTPRN-206ENST00000442029 FKBP8Q14318 412 aa19.25■□□□□ 0.67
PTPRN-206ENST00000442029 ZBTB1Q9Y2K1 713 aa19.25■□□□□ 0.67
PTPRN-206ENST00000442029 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
PTPRN-206ENST00000442029 CEMIPQ8WUJ3 1361 aa19.24■□□□□ 0.67
PTPRN-206ENST00000442029 HEG1Q9ULI3 1381 aa19.24■□□□□ 0.67
PTPRN-206ENST00000442029 BTBD11A6QL63 1104 aa19.24■□□□□ 0.67
PTPRN-206ENST00000442029 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
PTPRN-206ENST00000442029 USPL1Q5W0Q7 1092 aa19.24■□□□□ 0.67
PTPRN-206ENST00000442029 TEX13AQ9BXU3 409 aaPredicted RBP19.24■□□□□ 0.67
PTPRN-206ENST00000442029 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
PTPRN-206ENST00000442029 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
PTPRN-206ENST00000442029 NARFQ9UHQ1 456 aa19.23■□□□□ 0.67
PTPRN-206ENST00000442029 A0A0G2JLW4 131 aa19.22■□□□□ 0.67
PTPRN-206ENST00000442029 NPM2Q86SE8 214 aaKnown RBP19.22■□□□□ 0.67
PTPRN-206ENST00000442029 BCS1LQ9Y276 419 aa19.22■□□□□ 0.67
PTPRN-206ENST00000442029 A0A087WZG4 1122 aa19.21■□□□□ 0.67
PTPRN-206ENST00000442029 DPEP1P16444 411 aa19.2■□□□□ 0.66
PTPRN-206ENST00000442029 DDR1Q08345 913 aa19.2■□□□□ 0.66
PTPRN-206ENST00000442029 MCM10Q7L590 875 aa19.2■□□□□ 0.66
PTPRN-206ENST00000442029 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
PTPRN-206ENST00000442029 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
PTPRN-206ENST00000442029 GIGYF1O75420 1035 aaPredicted RBP19.19■□□□□ 0.66
PTPRN-206ENST00000442029 NRXN2Q9P2S2 1712 aa19.19■□□□□ 0.66
PTPRN-206ENST00000442029 ATP10DQ9P241 1426 aa19.18■□□□□ 0.66
PTPRN-206ENST00000442029 POLRMTO00411 1230 aaKnown RBP19.18■□□□□ 0.66
PTPRN-206ENST00000442029 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
PTPRN-206ENST00000442029 TM4SF1P30408 202 aa19.18■□□□□ 0.66
PTPRN-206ENST00000442029 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
PTPRN-206ENST00000442029 BCORQ6W2J9 1755 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 KCNQ3O43525 872 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 EIF5P55010 431 aaKnown RBP19.16■□□□□ 0.66
PTPRN-206ENST00000442029 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 NFIXQ14938 502 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 RALBP1Q15311 655 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 PIM2Q9P1W9 311 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 MAPK8IP3Q9UPT6 1336 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 LAMB4A4D0S4 1761 aa19.16■□□□□ 0.66
PTPRN-206ENST00000442029 IL6STP40189 918 aaPredicted RBP19.15■□□□□ 0.66
PTPRN-206ENST00000442029 KDM3BQ7LBC6 1761 aa19.14■□□□□ 0.66
PTPRN-206ENST00000442029 SERPINB2P05120 415 aa19.14■□□□□ 0.65
PTPRN-206ENST00000442029 DDX10Q13206 875 aaKnown RBP19.14■□□□□ 0.65
PTPRN-206ENST00000442029 BICDL1Q6ZP65 573 aa19.14■□□□□ 0.65
PTPRN-206ENST00000442029 ARHGAP27Q6ZUM4 889 aa19.14■□□□□ 0.65
PTPRN-206ENST00000442029 GPBP1L1Q9HC44 474 aaPredicted RBP19.14■□□□□ 0.65
PTPRN-206ENST00000442029 A1BGP04217 495 aa19.13■□□□□ 0.65
PTPRN-206ENST00000442029 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
PTPRN-206ENST00000442029 C1QTNF8P60827 252 aa19.13■□□□□ 0.65
PTPRN-206ENST00000442029 DALRD3Q5D0E6 543 aaKnown RBP19.13■□□□□ 0.65
PTPRN-206ENST00000442029 ZNF526Q8TF50 670 aaPredicted RBP19.13■□□□□ 0.65
PTPRN-206ENST00000442029 BCL2L12Q9HB09 334 aa19.13■□□□□ 0.65
PTPRN-206ENST00000442029 TBC1D2BQ9UPU7 963 aa19.13■□□□□ 0.65
PTPRN-206ENST00000442029 ADCY9O60503 1353 aa19.13■□□□□ 0.65
PTPRN-206ENST00000442029 SBF1O95248 1867 aa19.12■□□□□ 0.65
PTPRN-206ENST00000442029 CHRNA5P30532 468 aa19.12■□□□□ 0.65
PTPRN-206ENST00000442029 TAF7Q15545 349 aaPredicted RBP19.12■□□□□ 0.65
PTPRN-206ENST00000442029 CACNA1SQ13698 1873 aa19.11■□□□□ 0.65
PTPRN-206ENST00000442029 CCDC88AQ3V6T2 1871 aa19.11■□□□□ 0.65
PTPRN-206ENST00000442029 ANKRD31Q8N7Z5 1873 aa19.11■□□□□ 0.65
PTPRN-206ENST00000442029 KCNA3P22001 575 aa19.11■□□□□ 0.65
PTPRN-206ENST00000442029 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
PTPRN-206ENST00000442029 NPHP1O15259 732 aa19.1■□□□□ 0.65
PTPRN-206ENST00000442029 NFE2L2Q16236 605 aa19.1■□□□□ 0.65
PTPRN-206ENST00000442029 PNISRQ8TF01 805 aaKnown RBP19.1■□□□□ 0.65
PTPRN-206ENST00000442029 PLEKHF1Q96S99 279 aa19.1■□□□□ 0.65
PTPRN-206ENST00000442029 TBC1D9BQ66K14 1250 aa19.09■□□□□ 0.65
PTPRN-206ENST00000442029 DZIP3Q86Y13 1208 aaKnown RBP19.09■□□□□ 0.65
PTPRN-206ENST00000442029 CARMIL3Q8ND23 1372 aa19.08■□□□□ 0.65
PTPRN-206ENST00000442029 MYBBP1AQ9BQG0 1328 aaKnown RBP19.08■□□□□ 0.65
PTPRN-206ENST00000442029 PRAMEF22A3QJZ6 481 aa19.08■□□□□ 0.64
PTPRN-206ENST00000442029 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
PTPRN-206ENST00000442029 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
PTPRN-206ENST00000442029 SETDB2Q96T68 719 aa19.07■□□□□ 0.64
PTPRN-206ENST00000442029 MIS18AQ9NYP9 233 aa19.07■□□□□ 0.64
PTPRN-206ENST00000442029 H0YIN7 160 aa19.06■□□□□ 0.64
PTPRN-206ENST00000442029 CAMTA2O94983 1202 aa19.06■□□□□ 0.64
PTPRN-206ENST00000442029 C2CD5Q86YS7 1000 aa19.06■□□□□ 0.64
PTPRN-206ENST00000442029 ZNF652Q9Y2D9 606 aa19.06■□□□□ 0.64
PTPRN-206ENST00000442029 NUP98P52948 1817 aa19.05■□□□□ 0.64
PTPRN-206ENST00000442029 COL11A2P13942 1736 aaPredicted RBP19.05■□□□□ 0.64
PTPRN-206ENST00000442029 PDZRN3Q9UPQ7 1066 aa19.04■□□□□ 0.64
PTPRN-206ENST00000442029 PDE6BP35913 854 aa19.03■□□□□ 0.64
PTPRN-206ENST00000442029 ST5P78524 1137 aa19.03■□□□□ 0.64
PTPRN-206ENST00000442029 C9orf131Q5VYM1 1079 aa19.03■□□□□ 0.64
PTPRN-206ENST00000442029 TTLL6Q8N841 843 aa19.03■□□□□ 0.64
PTPRN-206ENST00000442029 CNBD1Q8NA66 436 aa19.03■□□□□ 0.64
PTPRN-206ENST00000442029 THUMPD2Q9BTF0 503 aaKnown RBP19.03■□□□□ 0.64
PTPRN-206ENST00000442029 RIPK4P57078 832 aa19.02■□□□□ 0.64
PTPRN-206ENST00000442029 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
PTPRN-206ENST00000442029 WDR43Q15061 677 aaKnown RBP eCLIP19.02■□□□□ 0.64
PTPRN-206ENST00000442029 PRR5LQ6MZQ0 368 aa19.02■□□□□ 0.64
PTPRN-206ENST00000442029 CLEC4GQ6UXB4 293 aa19.02■□□□□ 0.64
PTPRN-206ENST00000442029 BRIP1Q9BX63 1249 aa19.02■□□□□ 0.64
PTPRN-206ENST00000442029 ARFGEF2Q9Y6D5 1785 aa19.01■□□□□ 0.63
PTPRN-206ENST00000442029 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.63
PTPRN-206ENST00000442029 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
PTPRN-206ENST00000442029 NBPF26B4DH59 902 aa19■□□□□ 0.63
PTPRN-206ENST00000442029 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
PTPRN-206ENST00000442029 NBPF10Q6P3W6 841 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms