RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 PLPP6Q8IY26 295 aa8.62□□□□□ -1.03
HDAC9-215ENST00000441986 COLQQ9Y215 455 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-215ENST00000441986 COL24A1Q17RW2 1714 aa8.62□□□□□ -1.03
HDAC9-215ENST00000441986 SHANK3Q9BYB0 1731 aa8.62□□□□□ -1.03
HDAC9-215ENST00000441986 IGSF1Q8N6C5 1336 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 PCDH11XQ9BZA7 1347 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 PCDH11YQ9BZA8 1340 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 MON2Q7Z3U7 1717 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.61□□□□□ -1.03
HDAC9-215ENST00000441986 FYB1O15117 783 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 SEC24BO95487 1268 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 APLP1P51693 650 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 RRS1Q15050 365 aaKnown RBP8.61□□□□□ -1.03
HDAC9-215ENST00000441986 SLC39A7Q92504 469 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 LTN1O94822 1766 aa8.61□□□□□ -1.03
HDAC9-215ENST00000441986 ST20-MTHFSA0A0A6YYL1 179 aa8.6□□□□□ -1.03
HDAC9-215ENST00000441986 TOMM70O94826 608 aa8.6□□□□□ -1.03
HDAC9-215ENST00000441986 SSFA2P28290 1259 aa8.6□□□□□ -1.03
HDAC9-215ENST00000441986 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-215ENST00000441986 USHBP1Q8N6Y0 703 aa8.6□□□□□ -1.03
HDAC9-215ENST00000441986 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
HDAC9-215ENST00000441986 SMG6Q86US8 1419 aaKnown RBP8.6□□□□□ -1.03
HDAC9-215ENST00000441986 PALLDQ8WX93 1383 aa8.6□□□□□ -1.03
HDAC9-215ENST00000441986 USP54Q70EL1 1684 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 PHF14O94880 888 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 C7P10643 843 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 TGFB2P61812 414 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 HSP90AB2PQ58FF8 381 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 PIGBQ92521 554 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 NSD3Q9BZ95 1437 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 RTL1A6NKG5 1358 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 ADCY9O60503 1353 aa8.59□□□□□ -1.03
HDAC9-215ENST00000441986 LY75O60449 1722 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 CYP27B1O15528 508 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 SIK1P57059 783 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 TMEM92Q6UXU6 159 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 NLGN1Q8N2Q7 840 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 DNAJC5GQ8N7S2 189 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 TESK2Q96S53 571 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 GGNBP2Q9H3C7 697 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 WWC3Q9ULE0 1092 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 MEGF6O75095 1541 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 INSRP06213 1382 aa8.58□□□□□ -1.04
HDAC9-215ENST00000441986 FAM208AQ9UK61 1670 aaKnown RBP8.57□□□□□ -1.04
HDAC9-215ENST00000441986 POTEFA5A3E0 1075 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 ZMYND10O75800 440 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 TMF1P82094 1093 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 CDCA8Q53HL2 280 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 ARHGAP27Q6ZUM4 889 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 TMOD3Q9NYL9 352 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 KIF24Q5T7B8 1368 aa8.57□□□□□ -1.04
HDAC9-215ENST00000441986 GNPATO15228 680 aa8.56□□□□□ -1.04
HDAC9-215ENST00000441986 MMP10P09238 476 aa8.56□□□□□ -1.04
HDAC9-215ENST00000441986 SMIM5Q71RC9 77 aa8.56□□□□□ -1.04
HDAC9-215ENST00000441986 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
HDAC9-215ENST00000441986 C16orf71Q8IYS4 520 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-215ENST00000441986 LINC00116Q8NCU8 138 aa8.56□□□□□ -1.04
HDAC9-215ENST00000441986 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
HDAC9-215ENST00000441986 BCS1LQ9Y276 419 aa8.56□□□□□ -1.04
HDAC9-215ENST00000441986 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
HDAC9-215ENST00000441986 DOT1LQ8TEK3 1739 aa8.55□□□□□ -1.04
HDAC9-215ENST00000441986 A0A0G2JLW4 131 aa8.55□□□□□ -1.04
HDAC9-215ENST00000441986 PPM1GO15355 546 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-215ENST00000441986 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
HDAC9-215ENST00000441986 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
HDAC9-215ENST00000441986 METRNQ9UJH8 293 aa8.55□□□□□ -1.04
HDAC9-215ENST00000441986 ASAP1Q9ULH1 1129 aa8.55□□□□□ -1.04
HDAC9-215ENST00000441986 FLT4P35916 1363 aa8.55□□□□□ -1.04
HDAC9-215ENST00000441986 TONSLQ96HA7 1378 aa8.55□□□□□ -1.04
HDAC9-215ENST00000441986 TUBGCP6Q96RT7 1819 aa8.54□□□□□ -1.04
HDAC9-215ENST00000441986 FCHSD2O94868 740 aa8.54□□□□□ -1.04
HDAC9-215ENST00000441986 RFC4P35249 363 aa8.54□□□□□ -1.04
HDAC9-215ENST00000441986 CCDC87Q9NVE4 849 aa8.54□□□□□ -1.04
HDAC9-215ENST00000441986 PARP3Q9Y6F1 533 aa8.54□□□□□ -1.04
HDAC9-215ENST00000441986 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
HDAC9-215ENST00000441986 FSTL1Q12841 308 aa8.53□□□□□ -1.04
HDAC9-215ENST00000441986 ITPK1Q13572 414 aa8.53□□□□□ -1.04
HDAC9-215ENST00000441986 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
HDAC9-215ENST00000441986 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
HDAC9-215ENST00000441986 RBM46Q8TBY0 533 aaKnown RBP8.53□□□□□ -1.04
HDAC9-215ENST00000441986 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
HDAC9-215ENST00000441986 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
HDAC9-215ENST00000441986 WASHC2AQ641Q2 1341 aa8.53□□□□□ -1.04
HDAC9-215ENST00000441986 C4BP0C0L5 1744 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 POTEMA6NI47 508 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 ERVV-2B6SEH9 535 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 POTEB2H3BUK9 544 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 PHKG2P15735 406 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 DPEP1P16444 411 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 EYA1Q99502 592 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 SLC24A3Q9HC58 644 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 NMRK2Q9NPI5 230 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 PIM2Q9P1W9 311 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 C5P01031 1676 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 KDM2BQ8NHM5 1336 aa8.52□□□□□ -1.05
HDAC9-215ENST00000441986 RPS6KA4O75676 772 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms