RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 SLC10A4Q96EP9 437 aa10.62□□□□□ -0.71
EPHA4-208ENST00000441679 TONSLQ96HA7 1378 aa10.62□□□□□ -0.71
EPHA4-208ENST00000441679 PTPRTO14522 1441 aa10.61□□□□□ -0.71
EPHA4-208ENST00000441679 TET3O43151 1660 aa10.61□□□□□ -0.71
EPHA4-208ENST00000441679 ERFEQ4G0M1 354 aa10.61□□□□□ -0.71
EPHA4-208ENST00000441679 DEPDC4Q8N2C3 294 aa10.61□□□□□ -0.71
EPHA4-208ENST00000441679 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
EPHA4-208ENST00000441679 PATL2C9JE40 543 aaKnown RBP10.6□□□□□ -0.71
EPHA4-208ENST00000441679 PPEF1O14829 653 aaPredicted RBP10.6□□□□□ -0.71
EPHA4-208ENST00000441679 NCOA4Q13772 614 aa10.6□□□□□ -0.71
EPHA4-208ENST00000441679 ELOAQ14241 798 aaKnown RBP10.6□□□□□ -0.71
EPHA4-208ENST00000441679 EML3Q32P44 896 aa10.6□□□□□ -0.71
EPHA4-208ENST00000441679 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
EPHA4-208ENST00000441679 THEMISQ8N1K5 641 aaPredicted RBP10.6□□□□□ -0.71
EPHA4-208ENST00000441679 ANKLE1Q8NAG6 615 aa10.6□□□□□ -0.71
EPHA4-208ENST00000441679 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
EPHA4-208ENST00000441679 NPATQ14207 1427 aa10.59□□□□□ -0.71
EPHA4-208ENST00000441679 ABCC3O15438 1527 aa10.59□□□□□ -0.71
EPHA4-208ENST00000441679 ATP5J2-PTCD1G3V325 749 aa10.59□□□□□ -0.71
EPHA4-208ENST00000441679 NBPF20Q3BBV1 942 aa10.59□□□□□ -0.71
EPHA4-208ENST00000441679 MKRN1Q9UHC7 482 aaKnown RBP10.59□□□□□ -0.71
EPHA4-208ENST00000441679 CDV3Q9UKY7 258 aaKnown RBP10.59□□□□□ -0.71
EPHA4-208ENST00000441679 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
EPHA4-208ENST00000441679 SH3BP2P78314 561 aa10.58□□□□□ -0.72
EPHA4-208ENST00000441679 C4orf48Q5BLP8 95 aa10.58□□□□□ -0.72
EPHA4-208ENST00000441679 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.72
EPHA4-208ENST00000441679 FAM196BA6NMK8 535 aa10.57□□□□□ -0.72
EPHA4-208ENST00000441679 BRD1O95696 1058 aa10.57□□□□□ -0.72
EPHA4-208ENST00000441679 IDI1Q13907 227 aa10.57□□□□□ -0.72
EPHA4-208ENST00000441679 ZNF326Q5BKZ1 582 aaKnown RBP10.57□□□□□ -0.72
EPHA4-208ENST00000441679 C1QTNF2Q9BXJ5 285 aa10.57□□□□□ -0.72
EPHA4-208ENST00000441679 DOLKQ9UPQ8 538 aa10.57□□□□□ -0.72
EPHA4-208ENST00000441679 EFCAB6Q5THR3 1501 aa10.57□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L15C9J2P7 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L10C9JJH3 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L13C9JLJ4 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L12C9JPN9 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L11C9JVI0 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L21D6R901 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L18D6R9N7 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L22D6RA61 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L17D6RBQ6 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L19D6RCP7 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L20D6RJB6 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 USP17L24Q0WX57 530 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 TRIM32Q13049 653 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 SIN3AQ96ST3 1273 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 NOVA2Q9UNW9 492 aaKnown RBP10.56□□□□□ -0.72
EPHA4-208ENST00000441679 EID1Q9Y6B2 187 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 NOS1P29475 1434 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 MROH2AA6NES4 1674 aa10.56□□□□□ -0.72
EPHA4-208ENST00000441679 TNRQ92752 1358 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 GIGYF1O75420 1035 aaPredicted RBP10.55□□□□□ -0.72
EPHA4-208ENST00000441679 RASA1P20936 1047 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 WNT7BP56706 349 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 TRMT44Q8IYL2 757 aaKnown RBP10.55□□□□□ -0.72
EPHA4-208ENST00000441679 NOD1Q9Y239 953 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 NLRP1Q9C000 1473 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 MROH1Q8NDA8 1641 aa10.55□□□□□ -0.72
EPHA4-208ENST00000441679 TMEM88BA6NKF7 163 aa10.54□□□□□ -0.72
EPHA4-208ENST00000441679 ATP1A2P50993 1020 aa10.54□□□□□ -0.72
EPHA4-208ENST00000441679 KCNA1Q09470 495 aa10.54□□□□□ -0.72
EPHA4-208ENST00000441679 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
EPHA4-208ENST00000441679 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
EPHA4-208ENST00000441679 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.54□□□□□ -0.72
EPHA4-208ENST00000441679 NEURL4Q96JN8 1562 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 VARSP26640 1264 aaKnown RBP10.53□□□□□ -0.72
EPHA4-208ENST00000441679 RPIAP49247 311 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 B4GALNT3Q6L9W6 998 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 SEPT12Q8IYM1 358 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 L3MBTL2Q969R5 705 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 SIRT1Q96EB6 747 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
EPHA4-208ENST00000441679 ZMIZ1Q9ULJ6 1067 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 CAMSAP1Q5T5Y3 1602 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 SETD1BQ9UPS6 1966 aaKnown RBP10.53□□□□□ -0.72
EPHA4-208ENST00000441679 TRPM2O94759 1503 aa10.53□□□□□ -0.72
EPHA4-208ENST00000441679 CEBPAP49715 358 aaPredicted RBP10.52□□□□□ -0.73
EPHA4-208ENST00000441679 PTK7Q13308 1070 aa10.52□□□□□ -0.73
EPHA4-208ENST00000441679 CRTC2Q53ET0 693 aaPredicted RBP10.52□□□□□ -0.73
EPHA4-208ENST00000441679 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
EPHA4-208ENST00000441679 PLA2G2CQ5R387 149 aa10.52□□□□□ -0.73
EPHA4-208ENST00000441679 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
EPHA4-208ENST00000441679 E9PCH4 1651 aa10.52□□□□□ -0.73
EPHA4-208ENST00000441679 CLTCQ00610 1675 aaKnown RBP10.51□□□□□ -0.73
EPHA4-208ENST00000441679 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
EPHA4-208ENST00000441679 CARNS1A5YM72 827 aa10.51□□□□□ -0.73
EPHA4-208ENST00000441679 ESPNB1AK53 854 aa10.51□□□□□ -0.73
EPHA4-208ENST00000441679 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
EPHA4-208ENST00000441679 OGFOD1Q8N543 542 aa10.51□□□□□ -0.73
EPHA4-208ENST00000441679 FAM200AQ8TCP9 573 aa10.51□□□□□ -0.73
EPHA4-208ENST00000441679 CCDC9Q9Y3X0 531 aaKnown RBP10.51□□□□□ -0.73
EPHA4-208ENST00000441679 PLA2R1Q13018 1463 aa10.5□□□□□ -0.73
EPHA4-208ENST00000441679 TSGA10IPQ3SY00 556 aa10.5□□□□□ -0.73
EPHA4-208ENST00000441679 ANKLE2Q86XL3 938 aa10.5□□□□□ -0.73
EPHA4-208ENST00000441679 STK32AQ8WU08 396 aa10.5□□□□□ -0.73
EPHA4-208ENST00000441679 DNAAF2Q9NVR5 837 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms