RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CABP4P57796 275 aa16.39■□□□□ 0.21
CPSF4-206ENST00000441580 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
CPSF4-206ENST00000441580 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
CPSF4-206ENST00000441580 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
CPSF4-206ENST00000441580 KCPQ6ZWJ8 1503 aa16.39■□□□□ 0.21
CPSF4-206ENST00000441580 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
CPSF4-206ENST00000441580 EVA1CP58658 441 aa16.38■□□□□ 0.21
CPSF4-206ENST00000441580 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
CPSF4-206ENST00000441580 NWD2Q9ULI1 1742 aa16.38■□□□□ 0.21
CPSF4-206ENST00000441580 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
CPSF4-206ENST00000441580 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
CPSF4-206ENST00000441580 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
CPSF4-206ENST00000441580 BEND3Q5T5X7 828 aa16.36■□□□□ 0.21
CPSF4-206ENST00000441580 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
CPSF4-206ENST00000441580 KSR2Q6VAB6 950 aa16.36■□□□□ 0.21
CPSF4-206ENST00000441580 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
CPSF4-206ENST00000441580 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
CPSF4-206ENST00000441580 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
CPSF4-206ENST00000441580 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
CPSF4-206ENST00000441580 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
CPSF4-206ENST00000441580 ANP32EQ9BTT0 268 aa16.35■□□□□ 0.21
CPSF4-206ENST00000441580 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
CPSF4-206ENST00000441580 SLC39A6Q13433 755 aa16.34■□□□□ 0.21
CPSF4-206ENST00000441580 ZNF496Q96IT1 587 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-206ENST00000441580 USP44Q9H0E7 712 aa16.34■□□□□ 0.21
CPSF4-206ENST00000441580 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.21
CPSF4-206ENST00000441580 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
CPSF4-206ENST00000441580 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
CPSF4-206ENST00000441580 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-206ENST00000441580 MAP3K2Q9Y2U5 619 aa16.33■□□□□ 0.2
CPSF4-206ENST00000441580 AFDNP55196 1824 aaKnown RBP16.33■□□□□ 0.2
CPSF4-206ENST00000441580 CDC45O75419 566 aa16.32■□□□□ 0.2
CPSF4-206ENST00000441580 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
CPSF4-206ENST00000441580 PLEKHM2Q8IWE5 1019 aa16.32■□□□□ 0.2
CPSF4-206ENST00000441580 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
CPSF4-206ENST00000441580 BTG4Q9NY30 223 aa16.32■□□□□ 0.2
CPSF4-206ENST00000441580 AOX1Q06278 1338 aa16.31■□□□□ 0.2
CPSF4-206ENST00000441580 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
CPSF4-206ENST00000441580 ANXA1P04083 346 aa16.31■□□□□ 0.2
CPSF4-206ENST00000441580 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
CPSF4-206ENST00000441580 SSH3Q8TE77 659 aa16.31■□□□□ 0.2
CPSF4-206ENST00000441580 LRRCC1Q9C099 1032 aa16.31■□□□□ 0.2
CPSF4-206ENST00000441580 UTYO14607 1347 aa16.3■□□□□ 0.2
CPSF4-206ENST00000441580 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
CPSF4-206ENST00000441580 MTX1Q13505 466 aa16.3■□□□□ 0.2
CPSF4-206ENST00000441580 POLA2Q14181 598 aa16.3■□□□□ 0.2
CPSF4-206ENST00000441580 BECN1Q14457 450 aa16.3■□□□□ 0.2
CPSF4-206ENST00000441580 PDIA6Q15084 440 aa16.3■□□□□ 0.2
CPSF4-206ENST00000441580 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
CPSF4-206ENST00000441580 ITGB4P16144 1822 aa16.29■□□□□ 0.2
CPSF4-206ENST00000441580 PNMA6EA0A0J9YXQ4 647 aa16.29■□□□□ 0.2
CPSF4-206ENST00000441580 SEC24BO95487 1268 aa16.29■□□□□ 0.2
CPSF4-206ENST00000441580 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
CPSF4-206ENST00000441580 CDCA7Q9BWT1 371 aaPredicted RBP16.29■□□□□ 0.2
CPSF4-206ENST00000441580 OSBPL3Q9H4L5 887 aa16.29■□□□□ 0.2
CPSF4-206ENST00000441580 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
CPSF4-206ENST00000441580 COL15A1P39059 1388 aa16.28■□□□□ 0.2
CPSF4-206ENST00000441580 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
CPSF4-206ENST00000441580 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-206ENST00000441580 GRM8O00222 908 aa16.27■□□□□ 0.2
CPSF4-206ENST00000441580 TOM1O60784 492 aa16.27■□□□□ 0.2
CPSF4-206ENST00000441580 GSPT1P15170 499 aaKnown RBP16.27■□□□□ 0.2
CPSF4-206ENST00000441580 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.2
CPSF4-206ENST00000441580 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
CPSF4-206ENST00000441580 C22orf23Q9BZE7 217 aa16.27■□□□□ 0.2
CPSF4-206ENST00000441580 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
CPSF4-206ENST00000441580 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.2
CPSF4-206ENST00000441580 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.19
CPSF4-206ENST00000441580 SALL3Q9BXA9 1300 aa16.26■□□□□ 0.19
CPSF4-206ENST00000441580 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
CPSF4-206ENST00000441580 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
CPSF4-206ENST00000441580 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
CPSF4-206ENST00000441580 TJP1Q07157 1748 aa16.25■□□□□ 0.19
CPSF4-206ENST00000441580 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
CPSF4-206ENST00000441580 NBPF7P0C2Y1 421 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-206ENST00000441580 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
CPSF4-206ENST00000441580 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
CPSF4-206ENST00000441580 THRAP3Q9Y2W1 955 aaKnown RBP16.25■□□□□ 0.19
CPSF4-206ENST00000441580 SLIT2O94813 1529 aa16.24■□□□□ 0.19
CPSF4-206ENST00000441580 APBB1O00213 710 aa16.24■□□□□ 0.19
CPSF4-206ENST00000441580 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
CPSF4-206ENST00000441580 MYL6BP14649 208 aa16.24■□□□□ 0.19
CPSF4-206ENST00000441580 MX1P20591 662 aa16.24■□□□□ 0.19
CPSF4-206ENST00000441580 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
CPSF4-206ENST00000441580 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
CPSF4-206ENST00000441580 ERC1Q8IUD2 1116 aa16.24■□□□□ 0.19
CPSF4-206ENST00000441580 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
CPSF4-206ENST00000441580 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
CPSF4-206ENST00000441580 BCL9O00512 1426 aa16.23■□□□□ 0.19
CPSF4-206ENST00000441580 NEURL1BA8MQ27 555 aa16.23■□□□□ 0.19
CPSF4-206ENST00000441580 PDE1AP54750 535 aa16.23■□□□□ 0.19
CPSF4-206ENST00000441580 COPS6Q7L5N1 327 aa16.23■□□□□ 0.19
CPSF4-206ENST00000441580 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
CPSF4-206ENST00000441580 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
CPSF4-206ENST00000441580 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
CPSF4-206ENST00000441580 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
CPSF4-206ENST00000441580 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
CPSF4-206ENST00000441580 OTUD7AQ8TE49 926 aaPredicted RBP16.22■□□□□ 0.19
CPSF4-206ENST00000441580 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
CPSF4-206ENST00000441580 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms