RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 F13A1P00488 732 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 GJB2P29033 226 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 AK2P54819 239 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 RBM6P78332 1123 aaKnown RBP8.93□□□□□ -0.98
HDAC9-214ENST00000441542 FAM43BQ6ZT52 329 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-214ENST00000441542 ANKRD44Q8N8A2 993 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 EPC1Q9H2F5 836 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 MCM2P49736 904 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 STK3Q13188 491 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 FAM200AQ8TCP9 573 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 CCDC34Q96HJ3 373 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 ANKRD65E5RJM6 399 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 TPM3P06753 285 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 SKILP12757 684 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 KRBA2Q6ZNG9 492 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 CCAR2Q8N163 923 aaKnown RBP8.93□□□□□ -0.98
HDAC9-214ENST00000441542 FMNL2Q96PY5 1086 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 TTC37Q6PGP7 1564 aa8.93□□□□□ -0.98
HDAC9-214ENST00000441542 SEC31AO94979 1220 aaKnown RBP8.92□□□□□ -0.98
HDAC9-214ENST00000441542 ZNF165P49910 485 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 GNAI1P63096 354 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 RAD51AP2Q09MP3 1159 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 CUL4AQ13619 759 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 GNL2Q13823 731 aaKnown RBP8.92□□□□□ -0.98
HDAC9-214ENST00000441542 MRVI1Q9Y6F6 885 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 KANK1Q14678 1352 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 EIF2AK4Q9P2K8 1649 aaKnown RBP8.92□□□□□ -0.98
HDAC9-214ENST00000441542 CASTP20810 708 aaKnown RBP8.92□□□□□ -0.98
HDAC9-214ENST00000441542 CWC27Q6UX04 472 aaKnown RBP8.92□□□□□ -0.98
HDAC9-214ENST00000441542 HOMER1Q86YM7 354 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-214ENST00000441542 ITSN2Q9NZM3 1697 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 CHMLP26374 656 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 ZNF75DP51815 510 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 GPATCH11Q8N954 259 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 FEZ2Q9UHY8 353 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-214ENST00000441542 EMILIN1Q9Y6C2 1016 aa8.92□□□□□ -0.98
HDAC9-214ENST00000441542 SYCP2Q9BX26 1530 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 BECN2A8MW95 431 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 SYT10Q6XYQ8 523 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 MCM10Q7L590 875 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 PAXBP1Q9Y5B6 917 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 ABCC4O15439 1325 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 TSPOAP1O95153 1857 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 ARHGAP5Q13017 1502 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 MROH2AA6NES4 1674 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 HMMRO75330 724 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 ST5P78524 1137 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 ARHGAP29Q52LW3 1261 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 EVC2Q86UK5 1308 aa8.91□□□□□ -0.98
HDAC9-214ENST00000441542 MSH6P52701 1360 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 FYB1O15117 783 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 VGFO15240 615 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-214ENST00000441542 NFE2L2Q16236 605 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 PTPN21Q16825 1174 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 CCDC191Q8NCU4 936 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 DDX11Q96FC9 970 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 JAKMIP1Q96N16 626 aaKnown RBP8.9□□□□□ -0.98
HDAC9-214ENST00000441542 ZNF446Q9NWS9 450 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 SHANK2Q9UPX8 1470 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 RPAP1Q9BWH6 1393 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-214ENST00000441542 CCDC69A6NI79 296 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 FAM193AP78312 1265 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 LARP1BQ659C4 914 aaKnown RBP8.9□□□□□ -0.98
HDAC9-214ENST00000441542 GGT6Q6P531 493 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 RUFY3Q7L099 469 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 INTS4Q96HW7 963 aaKnown RBP8.9□□□□□ -0.98
HDAC9-214ENST00000441542 ATP6V1DQ9Y5K8 247 aa8.9□□□□□ -0.98
HDAC9-214ENST00000441542 LRRFIP2Q9Y608 721 aaKnown RBP8.9□□□□□ -0.98
HDAC9-214ENST00000441542 SLU7O95391 586 aaKnown RBP8.9□□□□□ -0.99
HDAC9-214ENST00000441542 G2E3Q7L622 706 aa8.9□□□□□ -0.99
HDAC9-214ENST00000441542 RPAP2Q8IXW5 612 aaPredicted RBP8.9□□□□□ -0.99
HDAC9-214ENST00000441542 FUCA2Q9BTY2 467 aa8.9□□□□□ -0.99
HDAC9-214ENST00000441542 LCMT1Q9UIC8 334 aa8.9□□□□□ -0.99
HDAC9-214ENST00000441542 IL16Q14005 1332 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 RRS1Q15050 365 aaKnown RBP8.89□□□□□ -0.99
HDAC9-214ENST00000441542 ZRANB1Q9UGI0 708 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 ABCA9Q8IUA7 1624 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 HTATSF1O43719 755 aaKnown RBP8.89□□□□□ -0.99
HDAC9-214ENST00000441542 LMAN1P49257 510 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 CLCN6P51797 869 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 CDC37L1Q7L3B6 337 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 ZSWIM4Q9H7M6 989 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 RAD50Q92878 1312 aa8.89□□□□□ -0.99
HDAC9-214ENST00000441542 UGGT1Q9NYU2 1555 aa8.88□□□□□ -0.99
HDAC9-214ENST00000441542 PREX1Q8TCU6 1659 aa8.88□□□□□ -0.99
HDAC9-214ENST00000441542 LOC102724159A0A0B4J2E5 919 aa8.88□□□□□ -0.99
HDAC9-214ENST00000441542 BMS1Q14692 1282 aaKnown RBP8.88□□□□□ -0.99
HDAC9-214ENST00000441542 PWP2Q15269 919 aaKnown RBP8.88□□□□□ -0.99
HDAC9-214ENST00000441542 PRPF40BQ6NWY9 871 aaKnown RBP8.88□□□□□ -0.99
HDAC9-214ENST00000441542 SPATA32Q96LK8 384 aa8.88□□□□□ -0.99
HDAC9-214ENST00000441542 LRRCC1Q9C099 1032 aa8.88□□□□□ -0.99
HDAC9-214ENST00000441542 LIMCH1Q9UPQ0 1083 aa8.88□□□□□ -0.99
HDAC9-214ENST00000441542 MTMR6Q9Y217 621 aa8.88□□□□□ -0.99
HDAC9-214ENST00000441542 CROCC2H7BZ55 1655 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms