RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 KIF13BQ9NQT8 1826 aa15.37■□□□□ 0.05
GTF3C5-206ENST00000439697 KCNA3P22001 575 aa15.36■□□□□ 0.05
GTF3C5-206ENST00000439697 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
GTF3C5-206ENST00000439697 RRAGCQ9HB90 399 aa15.36■□□□□ 0.05
GTF3C5-206ENST00000439697 UBR2Q8IWV8 1755 aa15.36■□□□□ 0.05
GTF3C5-206ENST00000439697 SIPA1L3O60292 1781 aaPredicted RBP15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 GYS1P13807 737 aa15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 CRKLP46109 303 aaKnown RBP15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 SLC39A6Q13433 755 aa15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 INTS5Q6P9B9 1019 aaKnown RBP15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 VSIG10Q8N0Z9 540 aa15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 NLGN1Q8N2Q7 840 aa15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 CCDC87Q9NVE4 849 aa15.35■□□□□ 0.05
GTF3C5-206ENST00000439697 FSTL1Q12841 308 aa15.34■□□□□ 0.05
GTF3C5-206ENST00000439697 RNF181Q9P0P0 153 aa15.34■□□□□ 0.05
GTF3C5-206ENST00000439697 CYP19A1P11511 503 aaPredicted RBP15.33■□□□□ 0.04
GTF3C5-206ENST00000439697 PRELPP51888 382 aa15.33■□□□□ 0.04
GTF3C5-206ENST00000439697 DNAJC10Q8IXB1 793 aa15.33■□□□□ 0.04
GTF3C5-206ENST00000439697 PARP3Q9Y6F1 533 aa15.33■□□□□ 0.04
GTF3C5-206ENST00000439697 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
GTF3C5-206ENST00000439697 CHRNA5P30532 468 aa15.32■□□□□ 0.04
GTF3C5-206ENST00000439697 RFC4P35249 363 aa15.31■□□□□ 0.04
GTF3C5-206ENST00000439697 RALBP1Q15311 655 aa15.31■□□□□ 0.04
GTF3C5-206ENST00000439697 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
GTF3C5-206ENST00000439697 PIM2Q9P1W9 311 aa15.31■□□□□ 0.04
GTF3C5-206ENST00000439697 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
GTF3C5-206ENST00000439697 KDM2BQ8NHM5 1336 aa15.31■□□□□ 0.04
GTF3C5-206ENST00000439697 BRCA1P38398 1863 aaKnown RBP15.3■□□□□ 0.04
GTF3C5-206ENST00000439697 SOS1Q07889 1333 aaPredicted RBP15.3■□□□□ 0.04
GTF3C5-206ENST00000439697 TEFQ10587 303 aa15.3■□□□□ 0.04
GTF3C5-206ENST00000439697 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
GTF3C5-206ENST00000439697 DALRD3Q5D0E6 543 aaKnown RBP15.3■□□□□ 0.04
GTF3C5-206ENST00000439697 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
GTF3C5-206ENST00000439697 USP42Q9H9J4 1324 aaKnown RBP15.3■□□□□ 0.04
GTF3C5-206ENST00000439697 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
GTF3C5-206ENST00000439697 HSPA1AP0DMV8 641 aaKnown RBP15.29■□□□□ 0.04
GTF3C5-206ENST00000439697 HSPA1BP0DMV9 641 aaKnown RBP15.29■□□□□ 0.04
GTF3C5-206ENST00000439697 RASSF7Q02833 373 aa15.29■□□□□ 0.04
GTF3C5-206ENST00000439697 DDR1Q08345 913 aa15.29■□□□□ 0.04
GTF3C5-206ENST00000439697 ZNF496Q96IT1 587 aaPredicted RBP15.29■□□□□ 0.04
GTF3C5-206ENST00000439697 HEG1Q9ULI3 1381 aa15.28■□□□□ 0.04
GTF3C5-206ENST00000439697 FKBP8Q14318 412 aa15.28■□□□□ 0.04
GTF3C5-206ENST00000439697 SMC1BQ8NDV3 1235 aa15.28■□□□□ 0.04
GTF3C5-206ENST00000439697 ZBTB1Q9Y2K1 713 aa15.28■□□□□ 0.04
GTF3C5-206ENST00000439697 TTC5Q8N0Z6 440 aa15.27■□□□□ 0.04
GTF3C5-206ENST00000439697 KCNQ3O43525 872 aa15.26■□□□□ 0.03
GTF3C5-206ENST00000439697 MCM10Q7L590 875 aa15.26■□□□□ 0.03
GTF3C5-206ENST00000439697 ARFGEF1Q9Y6D6 1849 aa15.26■□□□□ 0.03
GTF3C5-206ENST00000439697 BTBD11A6QL63 1104 aa15.25■□□□□ 0.03
GTF3C5-206ENST00000439697 STARD3NLO95772 234 aa15.25■□□□□ 0.03
GTF3C5-206ENST00000439697 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
GTF3C5-206ENST00000439697 RTF1Q92541 710 aaKnown RBP15.25■□□□□ 0.03
GTF3C5-206ENST00000439697 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
GTF3C5-206ENST00000439697 TEX13AQ9BXU3 409 aaPredicted RBP15.25■□□□□ 0.03
GTF3C5-206ENST00000439697 COL15A1P39059 1388 aa15.24■□□□□ 0.03
GTF3C5-206ENST00000439697 TM4SF1P30408 202 aa15.24■□□□□ 0.03
GTF3C5-206ENST00000439697 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
GTF3C5-206ENST00000439697 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
GTF3C5-206ENST00000439697 TNRC6CQ9HCJ0 1690 aaKnown RBP15.24■□□□□ 0.03
GTF3C5-206ENST00000439697 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
GTF3C5-206ENST00000439697 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
GTF3C5-206ENST00000439697 POLRMTO00411 1230 aaKnown RBP15.22■□□□□ 0.03
GTF3C5-206ENST00000439697 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
GTF3C5-206ENST00000439697 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
GTF3C5-206ENST00000439697 ZPR1O75312 459 aa15.21■□□□□ 0.03
GTF3C5-206ENST00000439697 CANXP27824 592 aaKnown RBP15.21■□□□□ 0.03
GTF3C5-206ENST00000439697 IL6STP40189 918 aaPredicted RBP15.21■□□□□ 0.03
GTF3C5-206ENST00000439697 TAF7Q15545 349 aaPredicted RBP15.21■□□□□ 0.03
GTF3C5-206ENST00000439697 PNNQ9H307 717 aaKnown RBP15.21■□□□□ 0.03
GTF3C5-206ENST00000439697 DLG5Q8TDM6 1919 aa15.21■□□□□ 0.02
GTF3C5-206ENST00000439697 PRKRIP1Q9H875 184 aaPredicted RBP15.2■□□□□ 0.02
GTF3C5-206ENST00000439697 SBF1O95248 1867 aa15.2■□□□□ 0.02
GTF3C5-206ENST00000439697 GLTPD2A6NH11 291 aa15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 A1BGP04217 495 aa15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 NEFMP07197 916 aa15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 SNRPA1P09661 255 aaKnown RBP15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 VEGFAP15692 232 aaPredicted RBP15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 ZEB1P37275 1124 aaPredicted RBP15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 NFIXQ14938 502 aa15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 USP16Q9Y5T5 823 aa15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
GTF3C5-206ENST00000439697 A0A087WZG4 1122 aa15.18■□□□□ 0.02
GTF3C5-206ENST00000439697 PRAMEF22A3QJZ6 481 aa15.18■□□□□ 0.02
GTF3C5-206ENST00000439697 LMNB1P20700 586 aa15.18■□□□□ 0.02
GTF3C5-206ENST00000439697 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
GTF3C5-206ENST00000439697 SCN7AQ01118 1682 aa15.17■□□□□ 0.02
GTF3C5-206ENST00000439697 POTECB2RU33 542 aa15.17■□□□□ 0.02
GTF3C5-206ENST00000439697 MKRN1Q9UHC7 482 aaKnown RBP15.17■□□□□ 0.02
GTF3C5-206ENST00000439697 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
GTF3C5-206ENST00000439697 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
GTF3C5-206ENST00000439697 THUMPD2Q9BTF0 503 aaKnown RBP15.16■□□□□ 0.02
GTF3C5-206ENST00000439697 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
GTF3C5-206ENST00000439697 ZC3H4Q9UPT8 1303 aaKnown RBP15.16■□□□□ 0.02
GTF3C5-206ENST00000439697 NFKBIEO00221 500 aa15.15■□□□□ 0.02
GTF3C5-206ENST00000439697 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
GTF3C5-206ENST00000439697 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
GTF3C5-206ENST00000439697 CARMIL3Q8ND23 1372 aa15.14■□□□□ 0.01
GTF3C5-206ENST00000439697 NBPF26B4DH59 902 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms