RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 PTMSP20962 102 aa14.82□□□□□ -0.04
HDAC8-214ENST00000439122 POLA2Q14181 598 aa14.82□□□□□ -0.04
HDAC8-214ENST00000439122 UNC5CLQ8IV45 518 aa14.82□□□□□ -0.04
HDAC8-214ENST00000439122 MCCP23508 829 aa14.82□□□□□ -0.04
HDAC8-214ENST00000439122 SKOR2Q2VWA4 1001 aaPredicted RBP14.82□□□□□ -0.04
HDAC8-214ENST00000439122 RHPN1Q8TCX5 695 aa14.82□□□□□ -0.04
HDAC8-214ENST00000439122 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
HDAC8-214ENST00000439122 ADCY9O60503 1353 aa14.81□□□□□ -0.04
HDAC8-214ENST00000439122 NEK4P51957 841 aa14.81□□□□□ -0.04
HDAC8-214ENST00000439122 NUCB2P80303 420 aa14.81□□□□□ -0.04
HDAC8-214ENST00000439122 TUBGCP6Q96RT7 1819 aa14.81□□□□□ -0.04
HDAC8-214ENST00000439122 AOX1Q06278 1338 aa14.81□□□□□ -0.04
HDAC8-214ENST00000439122 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
HDAC8-214ENST00000439122 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
HDAC8-214ENST00000439122 BAG4O95429 457 aaKnown RBP14.8□□□□□ -0.04
HDAC8-214ENST00000439122 PROSER3Q2NL68 480 aa14.8□□□□□ -0.04
HDAC8-214ENST00000439122 ZGPATQ8N5A5 531 aaKnown RBP14.8□□□□□ -0.04
HDAC8-214ENST00000439122 KIF1BPQ96EK5 621 aa14.8□□□□□ -0.04
HDAC8-214ENST00000439122 CWC22Q9HCG8 908 aaKnown RBP14.8□□□□□ -0.04
HDAC8-214ENST00000439122 MAP3K2Q9Y2U5 619 aa14.8□□□□□ -0.04
HDAC8-214ENST00000439122 PRAMEF22A3QJZ6 481 aa14.8□□□□□ -0.04
HDAC8-214ENST00000439122 MAP4K4O95819 1239 aaPredicted RBP14.8□□□□□ -0.04
HDAC8-214ENST00000439122 PKP1Q13835 747 aa14.8□□□□□ -0.04
HDAC8-214ENST00000439122 CLEC17AQ6ZS10 378 aa14.8□□□□□ -0.04
HDAC8-214ENST00000439122 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
HDAC8-214ENST00000439122 OS9Q13438 667 aaPredicted RBP14.79□□□□□ -0.04
HDAC8-214ENST00000439122 C9orf78Q9NZ63 289 aaPredicted RBP14.79□□□□□ -0.04
HDAC8-214ENST00000439122 C1orf167Q5SNV9 1468 aa14.79□□□□□ -0.04
HDAC8-214ENST00000439122 PANK2Q9BZ23 570 aa14.78□□□□□ -0.04
HDAC8-214ENST00000439122 PALD1Q9ULE6 856 aa14.78□□□□□ -0.04
HDAC8-214ENST00000439122 ERBB3P21860 1342 aa14.78□□□□□ -0.04
HDAC8-214ENST00000439122 MRE11P49959 708 aa14.78□□□□□ -0.04
HDAC8-214ENST00000439122 OVOS2A0A0G2JMS6 1433 aa14.78□□□□□ -0.04
HDAC8-214ENST00000439122 TRPM3Q9HCF6 1732 aaPredicted RBP14.77□□□□□ -0.04
HDAC8-214ENST00000439122 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.04
HDAC8-214ENST00000439122 KSR2Q6VAB6 950 aa14.77□□□□□ -0.04
HDAC8-214ENST00000439122 PI4K2BQ8TCG2 481 aa14.77□□□□□ -0.04
HDAC8-214ENST00000439122 MCTP1Q6DN14 999 aa14.77□□□□□ -0.05
HDAC8-214ENST00000439122 CYP2E1P05181 493 aaPredicted RBP14.76□□□□□ -0.05
HDAC8-214ENST00000439122 ANAPC15P60006 121 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
HDAC8-214ENST00000439122 RAPGEF4Q8WZA2 1011 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 TMX3Q96JJ7 454 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 GRPEL1Q9HAV7 217 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 NLRP2Q9NX02 1062 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 HEG1Q9ULI3 1381 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 RGPD5Q99666 1765 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 MCM2P49736 904 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 AIMP1Q12904 312 aaKnown RBP14.76□□□□□ -0.05
HDAC8-214ENST00000439122 IL25Q9H293 177 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 HYPKQ9NX55 129 aa14.76□□□□□ -0.05
HDAC8-214ENST00000439122 DDX49Q9Y6V7 483 aaKnown RBP14.76□□□□□ -0.05
HDAC8-214ENST00000439122 ALDH1L1O75891 902 aa14.75□□□□□ -0.05
HDAC8-214ENST00000439122 ATF3P18847 181 aa14.75□□□□□ -0.05
HDAC8-214ENST00000439122 NOL8Q76FK4 1167 aaKnown RBP14.75□□□□□ -0.05
HDAC8-214ENST00000439122 DDX17Q92841 729 aaKnown RBP14.75□□□□□ -0.05
HDAC8-214ENST00000439122 ISY1Q9ULR0 285 aaKnown RBP14.75□□□□□ -0.05
HDAC8-214ENST00000439122 CNTROBQ8N137 903 aa14.75□□□□□ -0.05
HDAC8-214ENST00000439122 FAM43AQ8N2R8 423 aa14.75□□□□□ -0.05
HDAC8-214ENST00000439122 KIF1AQ12756 1690 aa14.74□□□□□ -0.05
HDAC8-214ENST00000439122 SLC39A6Q13433 755 aa14.74□□□□□ -0.05
HDAC8-214ENST00000439122 MTX1Q13505 466 aa14.74□□□□□ -0.05
HDAC8-214ENST00000439122 CAMTA1Q9Y6Y1 1673 aa14.74□□□□□ -0.05
HDAC8-214ENST00000439122 DDX58O95786 925 aaKnown RBP14.74□□□□□ -0.05
HDAC8-214ENST00000439122 KLHL40Q2TBA0 621 aa14.74□□□□□ -0.05
HDAC8-214ENST00000439122 CLASRPQ8N2M8 674 aaKnown RBP14.74□□□□□ -0.05
HDAC8-214ENST00000439122 UPF3BQ9BZI7 483 aaKnown RBP14.74□□□□□ -0.05
HDAC8-214ENST00000439122 HDAC5Q9UQL6 1122 aa14.74□□□□□ -0.05
HDAC8-214ENST00000439122 ZNF790Q6PG37 636 aa14.73□□□□□ -0.05
HDAC8-214ENST00000439122 GAS2L3Q86XJ1 694 aa14.73□□□□□ -0.05
HDAC8-214ENST00000439122 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
HDAC8-214ENST00000439122 PA2G4Q9UQ80 394 aaKnown RBP14.73□□□□□ -0.05
HDAC8-214ENST00000439122 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 LINS1Q8NG48 757 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 ZDHHC9Q9Y397 364 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 GRM8O00222 908 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 SGSM2O43147 1006 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 GLRX3O76003 335 aaKnown RBP14.72□□□□□ -0.05
HDAC8-214ENST00000439122 TATP17735 454 aaPredicted RBP14.72□□□□□ -0.05
HDAC8-214ENST00000439122 HSPA4P34932 840 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 TTC41PQ6P2S7 1318 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 NPHP3Q7Z494 1330 aa14.72□□□□□ -0.05
HDAC8-214ENST00000439122 SIPA1L3O60292 1781 aaPredicted RBP14.72□□□□□ -0.05
HDAC8-214ENST00000439122 MYL6BP14649 208 aa14.71□□□□□ -0.05
HDAC8-214ENST00000439122 NCLP19338 710 aaKnown RBP14.71□□□□□ -0.05
HDAC8-214ENST00000439122 FOXD4L5Q5VV16 416 aaPredicted RBP14.71□□□□□ -0.05
HDAC8-214ENST00000439122 CWC27Q6UX04 472 aaKnown RBP14.71□□□□□ -0.05
HDAC8-214ENST00000439122 CABLES1Q8TDN4 633 aa14.71□□□□□ -0.05
HDAC8-214ENST00000439122 FOXD4L4Q8WXT5 416 aaPredicted RBP14.71□□□□□ -0.05
HDAC8-214ENST00000439122 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
HDAC8-214ENST00000439122 EPB41L2O43491 1005 aaKnown RBP14.71□□□□□ -0.05
HDAC8-214ENST00000439122 IFIT2P09913 472 aaKnown RBP14.71□□□□□ -0.05
HDAC8-214ENST00000439122 PDIA6Q15084 440 aa14.71□□□□□ -0.05
HDAC8-214ENST00000439122 RIC3Q7Z5B4 369 aa14.71□□□□□ -0.05
HDAC8-214ENST00000439122 PHKG2P15735 406 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 KIAA1211Q6ZU35 1233 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 ERC1Q8IUD2 1116 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 LMBRD1Q9NUN5 540 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms