RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 PPP1R14CQ8TAE6 165 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 SELENOOQ9BVL4 669 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 CAPN2P17655 700 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 TRAK1Q9UPV9 953 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-209ENST00000437951 CCDC196A0A1B0GTZ2 297 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 CEP57Q86XR8 500 aa13.3□□□□□ -0.28
PTCH1-209ENST00000437951 MVPQ14764 893 aaKnown RBP13.29□□□□□ -0.28
PTCH1-209ENST00000437951 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 GOLGA1Q92805 767 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 GBP1P32455 592 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCH1-209ENST00000437951 FMNL3Q8IVF7 1028 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 CEP120Q8N960 986 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 LRRC45Q96CN5 670 aa13.29□□□□□ -0.28
PTCH1-209ENST00000437951 CTAGE15A4D2H0 777 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 CTAGE8P0CG41 777 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 CTAGE6Q86UF2 777 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 CTAGE4Q8IX94 777 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCH1-209ENST00000437951 IQCGQ9H095 443 aaKnown RBP13.28□□□□□ -0.28
PTCH1-209ENST00000437951 MXRA7P84157 204 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 KIAA0753Q2KHM9 967 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 ZBTB17Q13105 803 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 CEP128Q6ZU80 1094 aa13.28□□□□□ -0.28
PTCH1-209ENST00000437951 FEZ2Q9UHY8 353 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-209ENST00000437951 NAA25Q14CX7 972 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 VCX3BQ9H321 246 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 KLHL40Q2TBA0 621 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 SEPT14Q6ZU15 432 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 CCDC114Q96M63 670 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 TRIM7Q9C029 511 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 CTNNA2P26232 953 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 TNIP1Q15025 636 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 SETDB1Q15047 1291 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 VCXQ9H320 206 aa13.27□□□□□ -0.28
PTCH1-209ENST00000437951 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
PTCH1-209ENST00000437951 UBE2HP62256 183 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 STK3Q13188 491 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 FAM114A2Q9NRY5 505 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 CTAGE9A4FU28 777 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 ALDH3A1P30838 453 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 JAKMIP1Q96N16 626 aaKnown RBP13.27□□□□□ -0.29
PTCH1-209ENST00000437951 SAMD15Q9P1V8 674 aa13.27□□□□□ -0.29
PTCH1-209ENST00000437951 AMPD3Q01432 767 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 RAB3IL1Q8TBN0 382 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 UBAC1Q9BSL1 405 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 JADE2Q9NQC1 790 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-209ENST00000437951 CCDC12Q8WUD4 166 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-209ENST00000437951 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
PTCH1-209ENST00000437951 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 LRRC27Q9C0I9 530 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 CTNNBL1Q8WYA6 563 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-209ENST00000437951 RPGRIP1LQ68CZ1 1315 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 GABPB1Q06547 395 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-209ENST00000437951 CAMK4Q16566 473 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 ATP5DP30049 168 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 TSNAXIP1Q2TAA8 658 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 STMN2Q93045 179 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 RABGAP1Q9Y3P9 1069 aa13.26□□□□□ -0.29
PTCH1-209ENST00000437951 WDHD1O75717 1129 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-209ENST00000437951 TUBB2AQ13885 445 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 TUBB2BQ9BVA1 445 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 CWC25Q9NXE8 425 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-209ENST00000437951 CASTP20810 708 aaKnown RBP13.25□□□□□ -0.29
PTCH1-209ENST00000437951 HDXQ7Z353 690 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 MPNDQ8N594 471 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 PNISRQ8TF01 805 aaKnown RBP13.25□□□□□ -0.29
PTCH1-209ENST00000437951 JAKMIP2Q96AA8 810 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTCH1-209ENST00000437951 RAB11FIP3O75154 756 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 CIB2O75838 187 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 CCDC38Q502W7 563 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 CASQ2O14958 399 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-209ENST00000437951 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 ARHGAP25P42331 645 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 LRSAM1Q6UWE0 723 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 ACTN2P35609 894 aa13.25□□□□□ -0.29
PTCH1-209ENST00000437951 PPM1FP49593 454 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-209ENST00000437951 NOLC1Q14978 699 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTCH1-209ENST00000437951 MAP7D1Q3KQU3 841 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
PTCH1-209ENST00000437951 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 ZNF853P0CG23 659 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 CYLC1P35663 651 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-209ENST00000437951 GNG11P61952 73 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 PABPN1LA6NDY0 278 aaKnown RBP13.24□□□□□ -0.29
PTCH1-209ENST00000437951 TMEM266Q2M3C6 531 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 FAM76AQ8TAV0 307 aa13.24□□□□□ -0.29
PTCH1-209ENST00000437951 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms