RNA–Protein interactions for RNA: ENST00000437575.5

HP1BP3-209, Transcript of heterochromatin protein 1 binding protein 3, human

TSL 3

Gene HP1BP3, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HP1BP3-209	ENST00000437575	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.55	■■■□□ 2.96
HP1BP3-209	ENST00000437575	COL15A1	P39059	1388 aa		33.52	■■■□□ 2.96
HP1BP3-209	ENST00000437575	CANX	P27824	592 aa	Known RBP	33.52	■■■□□ 2.96
HP1BP3-209	ENST00000437575	WDR43	Q15061	677 aa	Known RBP eCLIP	33.52	■■■□□ 2.96
HP1BP3-209	ENST00000437575	TAF7	Q15545	349 aa	Predicted RBP	33.52	■■■□□ 2.96
HP1BP3-209	ENST00000437575	GPR162	Q16538	588 aa		33.51	■■■□□ 2.95
HP1BP3-209	ENST00000437575	PELP1	Q8IZL8	1130 aa	Known RBP	33.5	■■■□□ 2.95
HP1BP3-209	ENST00000437575	ZPR1	O75312	459 aa		33.49	■■■□□ 2.95
HP1BP3-209	ENST00000437575	THUMPD2	Q9BTF0	503 aa	Known RBP	33.49	■■■□□ 2.95
HP1BP3-209	ENST00000437575	FKBP8	Q14318	412 aa		33.48	■■■□□ 2.95
HP1BP3-209	ENST00000437575	USPL1	Q5W0Q7	1092 aa		33.47	■■■□□ 2.95
HP1BP3-209	ENST00000437575	CCDC146	Q8IYE0	955 aa		33.47	■■■□□ 2.95
HP1BP3-209	ENST00000437575	MIS18A	Q9NYP9	233 aa		33.47	■■■□□ 2.95
HP1BP3-209	ENST00000437575	RIPK4	P57078	832 aa		33.46	■■■□□ 2.95
HP1BP3-209	ENST00000437575	PARP3	Q9Y6F1	533 aa		33.46	■■■□□ 2.95
HP1BP3-209	ENST00000437575	NARF	Q9UHQ1	456 aa		33.45	■■■□□ 2.95
HP1BP3-209	ENST00000437575	SNRPA1	P09661	255 aa	Known RBP	33.44	■■■□□ 2.94
HP1BP3-209	ENST00000437575	EIF5	P55010	431 aa	Known RBP	33.44	■■■□□ 2.94
HP1BP3-209	ENST00000437575	PNISR	Q8TF01	805 aa	Known RBP	33.44	■■■□□ 2.94
HP1BP3-209	ENST00000437575	ADAMTS8	Q9UP79	889 aa		33.44	■■■□□ 2.94
HP1BP3-209	ENST00000437575	PRAMEF22	A3QJZ6	481 aa		33.43	■■■□□ 2.94
HP1BP3-209	ENST00000437575	YY1	P25490	414 aa		33.43	■■■□□ 2.94
HP1BP3-209	ENST00000437575	TMPO	P42166	694 aa	Known RBP	33.43	■■■□□ 2.94
HP1BP3-209	ENST00000437575	USP16	Q9Y5T5	823 aa		33.43	■■■□□ 2.94
HP1BP3-209	ENST00000437575	A1BG	P04217	495 aa		33.42	■■■□□ 2.94
HP1BP3-209	ENST00000437575	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.42	■■■□□ 2.94
HP1BP3-209	ENST00000437575	RUNDC1	Q96C34	613 aa		33.41	■■■□□ 2.94
HP1BP3-209	ENST00000437575	C10orf71	Q711Q0	1435 aa		33.4	■■■□□ 2.94
HP1BP3-209	ENST00000437575		A0A087WZG4	1122 aa		33.4	■■■□□ 2.94
HP1BP3-209	ENST00000437575	IL6ST	P40189	918 aa	Predicted RBP	33.4	■■■□□ 2.94
HP1BP3-209	ENST00000437575	DDR1	Q08345	913 aa		33.4	■■■□□ 2.94
HP1BP3-209	ENST00000437575	RRP7A	Q9Y3A4	280 aa	Known RBP	33.4	■■■□□ 2.94
HP1BP3-209	ENST00000437575	YBX3	P16989	372 aa	Known RBP eCLIP	33.39	■■■□□ 2.94
HP1BP3-209	ENST00000437575	LMOD3	Q0VAK6	560 aa		33.39	■■■□□ 2.94
HP1BP3-209	ENST00000437575	KDM3B	Q7LBC6	1761 aa		33.39	■■■□□ 2.94
HP1BP3-209	ENST00000437575	NEUROD2	Q15784	382 aa		33.37	■■■□□ 2.93
HP1BP3-209	ENST00000437575	NPM2	Q86SE8	214 aa	Known RBP	33.37	■■■□□ 2.93
HP1BP3-209	ENST00000437575	BCL2L12	Q9HB09	334 aa		33.37	■■■□□ 2.93
HP1BP3-209	ENST00000437575	KIF13B	Q9NQT8	1826 aa		33.37	■■■□□ 2.93
HP1BP3-209	ENST00000437575	UTRN	P46939	3433 aa		33.37	■■■□□ 2.93
HP1BP3-209	ENST00000437575	TM4SF1	P30408	202 aa		33.36	■■■□□ 2.93
HP1BP3-209	ENST00000437575	POLRMT	O00411	1230 aa	Known RBP	33.35	■■■□□ 2.93
HP1BP3-209	ENST00000437575	PIP4K2A	P48426	406 aa	Predicted RBP	33.35	■■■□□ 2.93
HP1BP3-209	ENST00000437575	PXDNL	A1KZ92	1463 aa		33.34	■■■□□ 2.93
HP1BP3-209	ENST00000437575	NFIX	Q14938	502 aa		33.34	■■■□□ 2.93
HP1BP3-209	ENST00000437575	WWC3	Q9ULE0	1092 aa		33.34	■■■□□ 2.93
HP1BP3-209	ENST00000437575	TBC1D2B	Q9UPU7	963 aa		33.34	■■■□□ 2.93
HP1BP3-209	ENST00000437575	EIF4A1	P60842	406 aa	Known RBP	33.33	■■■□□ 2.93
HP1BP3-209	ENST00000437575	GRIN3B	O60391	1043 aa		33.32	■■■□□ 2.92
HP1BP3-209	ENST00000437575	TGFB2	P61812	414 aa		33.32	■■■□□ 2.92
HP1BP3-209	ENST00000437575	TSPYL4	Q9UJ04	414 aa		33.32	■■■□□ 2.92
HP1BP3-209	ENST00000437575	GOLGB1	Q14789	3259 aa	Known RBP	33.32	■■■□□ 2.92
HP1BP3-209	ENST00000437575	SCN7A	Q01118	1682 aa		33.3	■■■□□ 2.92
HP1BP3-209	ENST00000437575	GIGYF1	O75420	1035 aa	Predicted RBP	33.3	■■■□□ 2.92
HP1BP3-209	ENST00000437575	KIAA1551	Q9HCM1	1747 aa		33.3	■■■□□ 2.92
HP1BP3-209	ENST00000437575	LAMB4	A4D0S4	1761 aa		33.29	■■■□□ 2.92
HP1BP3-209	ENST00000437575	CHD4	Q14839	1912 aa		33.28	■■■□□ 2.92
HP1BP3-209	ENST00000437575		A0A0G2JLW4	131 aa		33.28	■■■□□ 2.92
HP1BP3-209	ENST00000437575	ANP32C	O43423	234 aa		33.28	■■■□□ 2.92
HP1BP3-209	ENST00000437575	CCDC184	Q52MB2	194 aa		33.28	■■■□□ 2.92
HP1BP3-209	ENST00000437575	BICDL1	Q6ZP65	573 aa		33.28	■■■□□ 2.92
HP1BP3-209	ENST00000437575	DZIP3	Q86Y13	1208 aa	Known RBP	33.28	■■■□□ 2.92
HP1BP3-209	ENST00000437575	TRIM35	Q9UPQ4	493 aa		33.28	■■■□□ 2.92
HP1BP3-209	ENST00000437575	NBPF26	B4DH59	902 aa		33.27	■■■□□ 2.92
HP1BP3-209	ENST00000437575	NBPF10	Q6P3W6	841 aa	Known RBP	33.27	■■■□□ 2.92
HP1BP3-209	ENST00000437575	NBPF15	Q8N660	670 aa		33.27	■■■□□ 2.92
HP1BP3-209	ENST00000437575	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.26	■■■□□ 2.92
HP1BP3-209	ENST00000437575	CAMTA2	O94983	1202 aa		33.26	■■■□□ 2.91
HP1BP3-209	ENST00000437575	DPEP1	P16444	411 aa		33.26	■■■□□ 2.91
HP1BP3-209	ENST00000437575	BABAM1	Q9NWV8	329 aa		33.26	■■■□□ 2.91
HP1BP3-209	ENST00000437575	SERPINB2	P05120	415 aa		33.25	■■■□□ 2.91
HP1BP3-209	ENST00000437575	TBC1D9B	Q66K14	1250 aa		33.25	■■■□□ 2.91
HP1BP3-209	ENST00000437575	AFDN	P55196	1824 aa	Known RBP	33.22	■■■□□ 2.91
HP1BP3-209	ENST00000437575	BCOR	Q6W2J9	1755 aa		33.21	■■■□□ 2.91
HP1BP3-209	ENST00000437575	APAF1	O14727	1248 aa		33.21	■■■□□ 2.91
HP1BP3-209	ENST00000437575	NRXN2	Q9P2S2	1712 aa		33.21	■■■□□ 2.91
HP1BP3-209	ENST00000437575	BCS1L	Q9Y276	419 aa		33.19	■■■□□ 2.9
HP1BP3-209	ENST00000437575	LAS1L	Q9Y4W2	734 aa	Known RBP	33.18	■■■□□ 2.9
HP1BP3-209	ENST00000437575	CARMIL3	Q8ND23	1372 aa		33.18	■■■□□ 2.9
HP1BP3-209	ENST00000437575	CHL1	O00533	1208 aa		33.17	■■■□□ 2.9
HP1BP3-209	ENST00000437575	KCNA3	P22001	575 aa		33.17	■■■□□ 2.9
HP1BP3-209	ENST00000437575	MRS2	Q9HD23	443 aa		33.17	■■■□□ 2.9
HP1BP3-209	ENST00000437575	CHRNA5	P30532	468 aa		33.16	■■■□□ 2.9
HP1BP3-209	ENST00000437575	SETDB2	Q96T68	719 aa		33.16	■■■□□ 2.9
HP1BP3-209	ENST00000437575	ZNF652	Q9Y2D9	606 aa		33.16	■■■□□ 2.9
HP1BP3-209	ENST00000437575	CLEC4G	Q6UXB4	293 aa		33.15	■■■□□ 2.9
HP1BP3-209	ENST00000437575	NGEF	Q8N5V2	710 aa		33.15	■■■□□ 2.9
HP1BP3-209	ENST00000437575	PIM2	Q9P1W9	311 aa		33.14	■■■□□ 2.9
HP1BP3-209	ENST00000437575	BRCA1	P38398	1863 aa	Known RBP	33.14	■■■□□ 2.9
HP1BP3-209	ENST00000437575	MYL6B	P14649	208 aa		33.13	■■■□□ 2.89
HP1BP3-209	ENST00000437575	ERBB4	Q15303	1308 aa		33.12	■■■□□ 2.89
HP1BP3-209	ENST00000437575	EIF2S2	P20042	333 aa	Known RBP	33.12	■■■□□ 2.89
HP1BP3-209	ENST00000437575	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.12	■■■□□ 2.89
HP1BP3-209	ENST00000437575	RGL2	O15211	777 aa		33.1	■■■□□ 2.89
HP1BP3-209	ENST00000437575	PRR5L	Q6MZQ0	368 aa		33.1	■■■□□ 2.89
HP1BP3-209	ENST00000437575	CFAP44	Q96MT7	982 aa		33.1	■■■□□ 2.89
HP1BP3-209	ENST00000437575	NPHP1	O15259	732 aa		33.09	■■■□□ 2.89
HP1BP3-209	ENST00000437575	KRT24	Q2M2I5	525 aa		33.09	■■■□□ 2.89
HP1BP3-209	ENST00000437575	DALRD3	Q5D0E6	543 aa	Known RBP	33.09	■■■□□ 2.89
HP1BP3-209	ENST00000437575	CNBD1	Q8NA66	436 aa		33.09	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms