RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 GTF2IP78347 998 aa9.66□□□□□ -0.86
RGPD6-203ENST00000437167 C1orf216Q8TAB5 229 aa9.66□□□□□ -0.86
RGPD6-203ENST00000437167 C2CD2LO14523 706 aa9.65□□□□□ -0.86
RGPD6-203ENST00000437167 ATP4AP20648 1035 aa9.65□□□□□ -0.86
RGPD6-203ENST00000437167 SNRPNP63162 240 aaKnown RBP9.65□□□□□ -0.86
RGPD6-203ENST00000437167 C1orf229Q6ZS94 237 aaPredicted RBP9.65□□□□□ -0.86
RGPD6-203ENST00000437167 DEPDC4Q8N2C3 294 aa9.65□□□□□ -0.86
RGPD6-203ENST00000437167 DCAF5Q96JK2 942 aa9.65□□□□□ -0.86
RGPD6-203ENST00000437167 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
RGPD6-203ENST00000437167 PCDHGC4Q9Y5F7 938 aa9.65□□□□□ -0.86
RGPD6-203ENST00000437167 PCDHGA11Q9Y5H2 935 aa9.65□□□□□ -0.86
RGPD6-203ENST00000437167 A0A1W2PNR3 127 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 DCDC2BA2VCK2 349 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 CDK2AP1O14519 115 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 BACH1O14867 736 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 ATXN7O15265 892 aaPredicted RBP9.64□□□□□ -0.87
RGPD6-203ENST00000437167 NCOA4Q13772 614 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 SLC4A9Q96Q91 983 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 ALG2Q9H553 416 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 GGA1Q9UJY5 639 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 MKL2Q9ULH7 1088 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 PARP3Q9Y6F1 533 aa9.64□□□□□ -0.87
RGPD6-203ENST00000437167 KHNYNO15037 678 aaKnown RBP9.63□□□□□ -0.87
RGPD6-203ENST00000437167 BICDL1Q6ZP65 573 aa9.63□□□□□ -0.87
RGPD6-203ENST00000437167 NLRP8Q86W28 1048 aa9.63□□□□□ -0.87
RGPD6-203ENST00000437167 PROSER2Q86WR7 435 aaPredicted RBP9.63□□□□□ -0.87
RGPD6-203ENST00000437167 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
RGPD6-203ENST00000437167 NDFIP2Q9NV92 336 aa9.63□□□□□ -0.87
RGPD6-203ENST00000437167 USP3Q9Y6I4 520 aa9.63□□□□□ -0.87
RGPD6-203ENST00000437167 PLA2G4EQ3MJ16 856 aa9.62□□□□□ -0.87
RGPD6-203ENST00000437167 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
RGPD6-203ENST00000437167 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
RGPD6-203ENST00000437167 LZTS3O60299 673 aaPredicted RBP9.61□□□□□ -0.87
RGPD6-203ENST00000437167 MTFR1Q15390 333 aa9.61□□□□□ -0.87
RGPD6-203ENST00000437167 IQSEC3Q9UPP2 1182 aaPredicted RBP9.61□□□□□ -0.87
RGPD6-203ENST00000437167 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
RGPD6-203ENST00000437167 MSTNO14793 375 aa9.6□□□□□ -0.87
RGPD6-203ENST00000437167 CD33P20138 364 aa9.6□□□□□ -0.87
RGPD6-203ENST00000437167 SLCO4C1Q6ZQN7 724 aa9.6□□□□□ -0.87
RGPD6-203ENST00000437167 NFATC2IPQ8NCF5 419 aa9.6□□□□□ -0.87
RGPD6-203ENST00000437167 ZNF358Q9NW07 568 aa9.6□□□□□ -0.87
RGPD6-203ENST00000437167 POM121CA8CG34 1229 aa9.59□□□□□ -0.87
RGPD6-203ENST00000437167 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
RGPD6-203ENST00000437167 ZIC5Q96T25 663 aa9.59□□□□□ -0.87
RGPD6-203ENST00000437167 ZDHHC3Q9NYG2 299 aa9.59□□□□□ -0.87
RGPD6-203ENST00000437167 ZNF232Q9UNY5 417 aa9.59□□□□□ -0.87
RGPD6-203ENST00000437167 ARAFP10398 606 aa9.58□□□□□ -0.88
RGPD6-203ENST00000437167 GRIN2CQ14957 1233 aa9.58□□□□□ -0.88
RGPD6-203ENST00000437167 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
RGPD6-203ENST00000437167 NEUROD4Q9HD90 331 aa9.58□□□□□ -0.88
RGPD6-203ENST00000437167 PRR12Q9ULL5 1215 aa9.58□□□□□ -0.88
RGPD6-203ENST00000437167 TXLNAP40222 546 aa9.57□□□□□ -0.88
RGPD6-203ENST00000437167 TNP2Q05952 138 aa9.57□□□□□ -0.88
RGPD6-203ENST00000437167 ERICH6Q7L0X2 663 aa9.57□□□□□ -0.88
RGPD6-203ENST00000437167 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
RGPD6-203ENST00000437167 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
RGPD6-203ENST00000437167 ZNF295-AS1Q8N0V1 137 aa9.57□□□□□ -0.88
RGPD6-203ENST00000437167 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
RGPD6-203ENST00000437167 EPXP11678 715 aa9.56□□□□□ -0.88
RGPD6-203ENST00000437167 HDGFL1Q5TGJ6 251 aa9.56□□□□□ -0.88
RGPD6-203ENST00000437167 TNS4Q8IZW8 715 aa9.56□□□□□ -0.88
RGPD6-203ENST00000437167 ADAMTS19Q8TE59 1207 aa9.56□□□□□ -0.88
RGPD6-203ENST00000437167 L3MBTL2Q969R5 705 aa9.56□□□□□ -0.88
RGPD6-203ENST00000437167 BTBD6Q96KE9 485 aa9.56□□□□□ -0.88
RGPD6-203ENST00000437167 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
RGPD6-203ENST00000437167 SLC9A9Q8IVB4 645 aa9.55□□□□□ -0.88
RGPD6-203ENST00000437167 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
RGPD6-203ENST00000437167 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 PIK3R2O00459 728 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 ADH6P28332 368 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 NOS2P35228 1153 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 PCBP4P57723 403 aaKnown RBP9.54□□□□□ -0.88
RGPD6-203ENST00000437167 USP17L2Q6R6M4 530 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 LRRC69Q6ZNQ3 347 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 ZDHHC1Q8WTX9 485 aa9.54□□□□□ -0.88
RGPD6-203ENST00000437167 FAM157BP0CG42 384 aa9.53□□□□□ -0.88
RGPD6-203ENST00000437167 SUV39H2Q9H5I1 410 aa9.53□□□□□ -0.88
RGPD6-203ENST00000437167 MARK1Q9P0L2 795 aa9.53□□□□□ -0.88
RGPD6-203ENST00000437167 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
RGPD6-203ENST00000437167 KRBA1A5PL33 1030 aa9.52□□□□□ -0.89
RGPD6-203ENST00000437167 ITGB2P05107 769 aa9.52□□□□□ -0.89
RGPD6-203ENST00000437167 COL8A1P27658 744 aa9.52□□□□□ -0.89
RGPD6-203ENST00000437167 TEAD4Q15561 434 aa9.52□□□□□ -0.89
RGPD6-203ENST00000437167 FAM182BQ5T319 152 aa9.52□□□□□ -0.89
RGPD6-203ENST00000437167 CCDC102BQ68D86 513 aa9.52□□□□□ -0.89
RGPD6-203ENST00000437167 CHSY3Q70JA7 882 aa9.52□□□□□ -0.89
RGPD6-203ENST00000437167 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
RGPD6-203ENST00000437167 LOC100996750A0A140TA64 210 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 SERTM1A2A2V5 107 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 GNB5O14775 395 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 HCN2Q9UL51 889 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 KIAA1024Q9UPX6 916 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 CHMP3Q9Y3E7 222 aa9.51□□□□□ -0.89
RGPD6-203ENST00000437167 FCHSD1Q86WN1 690 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms