RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 ZBED9Q6R2W3 1325 aa19.2■□□□□ 0.66
CPNE1-215ENST00000437100 LAMB4A4D0S4 1761 aa19.19■□□□□ 0.66
CPNE1-215ENST00000437100 E9PSI1 815 aa19.19■□□□□ 0.66
CPNE1-215ENST00000437100 STARD3NLO95772 234 aa19.19■□□□□ 0.66
CPNE1-215ENST00000437100 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
CPNE1-215ENST00000437100 TRMT2AQ8IZ69 625 aaKnown RBP19.19■□□□□ 0.66
CPNE1-215ENST00000437100 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
CPNE1-215ENST00000437100 AK7Q96M32 723 aa19.18■□□□□ 0.66
CPNE1-215ENST00000437100 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
CPNE1-215ENST00000437100 CCDC87Q9NVE4 849 aa19.18■□□□□ 0.66
CPNE1-215ENST00000437100 ZBTB1Q9Y2K1 713 aa19.18■□□□□ 0.66
CPNE1-215ENST00000437100 QSER1Q2KHR3 1735 aa19.17■□□□□ 0.66
CPNE1-215ENST00000437100 C8orf58Q8NAV2 365 aa19.17■□□□□ 0.66
CPNE1-215ENST00000437100 CDCA7LQ96GN5 454 aa19.17■□□□□ 0.66
CPNE1-215ENST00000437100 UBR3Q6ZT12 1888 aa19.17■□□□□ 0.66
CPNE1-215ENST00000437100 SOS1Q07889 1333 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-215ENST00000437100 PNPLA7Q6ZV29 1317 aa19.17■□□□□ 0.66
CPNE1-215ENST00000437100 TUBGCP6Q96RT7 1819 aa19.16■□□□□ 0.66
CPNE1-215ENST00000437100 GNPATO15228 680 aa19.16■□□□□ 0.66
CPNE1-215ENST00000437100 RPS6KA4O75676 772 aa19.16■□□□□ 0.66
CPNE1-215ENST00000437100 DUSP27Q5VZP5 1158 aa19.16■□□□□ 0.66
CPNE1-215ENST00000437100 A1BGP04217 495 aa19.15■□□□□ 0.66
CPNE1-215ENST00000437100 SSFA2P28290 1259 aa19.15■□□□□ 0.66
CPNE1-215ENST00000437100 R3HDM1Q15032 1099 aaKnown RBP19.15■□□□□ 0.66
CPNE1-215ENST00000437100 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
CPNE1-215ENST00000437100 TFCP2L1Q9NZI6 479 aa19.15■□□□□ 0.66
CPNE1-215ENST00000437100 ERBB4Q15303 1308 aa19.15■□□□□ 0.66
CPNE1-215ENST00000437100 NBPF26B4DH59 902 aa19.14■□□□□ 0.65
CPNE1-215ENST00000437100 ADRA2BP18089 450 aa19.14■□□□□ 0.65
CPNE1-215ENST00000437100 NBPF10Q6P3W6 841 aaKnown RBP19.14■□□□□ 0.65
CPNE1-215ENST00000437100 NBPF15Q8N660 670 aa19.14■□□□□ 0.65
CPNE1-215ENST00000437100 EIF5P55010 431 aaKnown RBP19.13■□□□□ 0.65
CPNE1-215ENST00000437100 LRP10Q7Z4F1 713 aa19.13■□□□□ 0.65
CPNE1-215ENST00000437100 RTCBQ9Y3I0 505 aaKnown RBP19.13■□□□□ 0.65
CPNE1-215ENST00000437100 CASZ1Q86V15 1759 aa19.13■□□□□ 0.65
CPNE1-215ENST00000437100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.12■□□□□ 0.65
CPNE1-215ENST00000437100 IL6STP40189 918 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-215ENST00000437100 EXOSC9Q06265 439 aaKnown RBP19.12■□□□□ 0.65
CPNE1-215ENST00000437100 PDIA6Q15084 440 aa19.12■□□□□ 0.65
CPNE1-215ENST00000437100 SMIM5Q71RC9 77 aa19.12■□□□□ 0.65
CPNE1-215ENST00000437100 COL23A1Q86Y22 540 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-215ENST00000437100 FLAD1Q8NFF5 587 aa19.12■□□□□ 0.65
CPNE1-215ENST00000437100 PDGFDQ9GZP0 370 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-215ENST00000437100 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-215ENST00000437100 TWISTNBQ3B726 338 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-215ENST00000437100 COL15A1P39059 1388 aa19.1■□□□□ 0.65
CPNE1-215ENST00000437100 ELL2O00472 640 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-215ENST00000437100 VAMP4O75379 141 aa19.1■□□□□ 0.65
CPNE1-215ENST00000437100 CANXP27824 592 aaKnown RBP19.1■□□□□ 0.65
CPNE1-215ENST00000437100 HDGFL1Q5TGJ6 251 aa19.1■□□□□ 0.65
CPNE1-215ENST00000437100 PHF14O94880 888 aa19.09■□□□□ 0.65
CPNE1-215ENST00000437100 EIF2S2P20042 333 aaKnown RBP19.09■□□□□ 0.65
CPNE1-215ENST00000437100 PIP4K2AP48426 406 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-215ENST00000437100 ARHGEF1Q92888 912 aaKnown RBP19.09■□□□□ 0.65
CPNE1-215ENST00000437100 PROSER3Q2NL68 480 aa19.08■□□□□ 0.64
CPNE1-215ENST00000437100 TRAPPC3LQ5T215 181 aa19.08■□□□□ 0.64
CPNE1-215ENST00000437100 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.64
CPNE1-215ENST00000437100 C4AP0C0L4 1744 aa19.08■□□□□ 0.64
CPNE1-215ENST00000437100 CHPF2Q9P2E5 772 aa19.07■□□□□ 0.64
CPNE1-215ENST00000437100 USP42Q9H9J4 1324 aaKnown RBP19.06■□□□□ 0.64
CPNE1-215ENST00000437100 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
CPNE1-215ENST00000437100 CHMP4AQ9BY43 222 aa19.06■□□□□ 0.64
CPNE1-215ENST00000437100 A0A087WZG4 1122 aa19.05■□□□□ 0.64
CPNE1-215ENST00000437100 CCDC30Q5VVM6 783 aa19.05■□□□□ 0.64
CPNE1-215ENST00000437100 SLC16A10Q8TF71 515 aa19.05■□□□□ 0.64
CPNE1-215ENST00000437100 DBF4Q9UBU7 674 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-215ENST00000437100 ANXA1P04083 346 aa19.04■□□□□ 0.64
CPNE1-215ENST00000437100 NARFQ9UHQ1 456 aa19.04■□□□□ 0.64
CPNE1-215ENST00000437100 RGL2O15211 777 aa19.03■□□□□ 0.64
CPNE1-215ENST00000437100 CAMTA2O94983 1202 aa19.03■□□□□ 0.64
CPNE1-215ENST00000437100 CT47B1P0C2W7 299 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-215ENST00000437100 MYL6BP14649 208 aa19.03■□□□□ 0.64
CPNE1-215ENST00000437100 RFC4P35249 363 aa19.03■□□□□ 0.64
CPNE1-215ENST00000437100 BCL2L12Q9HB09 334 aa19.03■□□□□ 0.64
CPNE1-215ENST00000437100 SRP68Q9UHB9 627 aaKnown RBP19.03■□□□□ 0.64
CPNE1-215ENST00000437100 COL24A1Q17RW2 1714 aa19.03■□□□□ 0.64
CPNE1-215ENST00000437100 SCN7AQ01118 1682 aa19.02■□□□□ 0.64
CPNE1-215ENST00000437100 GYS1P13807 737 aa19.02■□□□□ 0.64
CPNE1-215ENST00000437100 MTFR1LQ9H019 292 aa19.02■□□□□ 0.64
CPNE1-215ENST00000437100 HYPKQ9NX55 129 aa19.02■□□□□ 0.64
CPNE1-215ENST00000437100 TTLL7Q6ZT98 887 aa19.01■□□□□ 0.63
CPNE1-215ENST00000437100 DZIP3Q86Y13 1208 aaKnown RBP19.01■□□□□ 0.63
CPNE1-215ENST00000437100 ZNF428Q96B54 188 aa19.01■□□□□ 0.63
CPNE1-215ENST00000437100 ZNF330Q9Y3S2 320 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-215ENST00000437100 ZBTB7AO95365 584 aa19■□□□□ 0.63
CPNE1-215ENST00000437100 USPL1Q5W0Q7 1092 aa19■□□□□ 0.63
CPNE1-215ENST00000437100 XAGE3Q8WTP9 111 aa19■□□□□ 0.63
CPNE1-215ENST00000437100 SGIP1Q9BQI5 828 aa19■□□□□ 0.63
CPNE1-215ENST00000437100 TBC1D2BQ9UPU7 963 aa19■□□□□ 0.63
CPNE1-215ENST00000437100 BCORQ6W2J9 1755 aa19■□□□□ 0.63
CPNE1-215ENST00000437100 MSH5O43196 834 aa18.99■□□□□ 0.63
CPNE1-215ENST00000437100 MAP3K15Q6ZN16 1313 aa18.99■□□□□ 0.63
CPNE1-215ENST00000437100 ERVV-1B6SEH8 477 aa18.98■□□□□ 0.63
CPNE1-215ENST00000437100 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
CPNE1-215ENST00000437100 ZPR1O75312 459 aa18.98■□□□□ 0.63
CPNE1-215ENST00000437100 PTGER2P43116 358 aa18.98■□□□□ 0.63
CPNE1-215ENST00000437100 FKBP8Q14318 412 aa18.98■□□□□ 0.63
CPNE1-215ENST00000437100 COPS6Q7L5N1 327 aa18.98■□□□□ 0.63
CPNE1-215ENST00000437100 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
CPNE1-215ENST00000437100 STK31Q9BXU1 1019 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms