RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 PRAMEF22A3QJZ6 481 aa18.99■□□□□ 0.63
SKA2-202ENST00000437036 EIF2S2P20042 333 aaKnown RBP18.99■□□□□ 0.63
SKA2-202ENST00000437036 TWISTNBQ3B726 338 aaPredicted RBP18.99■□□□□ 0.63
SKA2-202ENST00000437036 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
SKA2-202ENST00000437036 RREB1Q92766 1687 aa18.98■□□□□ 0.63
SKA2-202ENST00000437036 HDGFL1Q5TGJ6 251 aa18.98■□□□□ 0.63
SKA2-202ENST00000437036 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
SKA2-202ENST00000437036 TFCP2L1Q9NZI6 479 aa18.98■□□□□ 0.63
SKA2-202ENST00000437036 CICQ96RK0 1608 aaPredicted RBP18.97■□□□□ 0.63
SKA2-202ENST00000437036 GNPATO15228 680 aa18.97■□□□□ 0.63
SKA2-202ENST00000437036 SLC15A2Q16348 729 aa18.97■□□□□ 0.63
SKA2-202ENST00000437036 AKT1S1Q96B36 256 aa18.97■□□□□ 0.63
SKA2-202ENST00000437036 RTCBQ9Y3I0 505 aaKnown RBP18.97■□□□□ 0.63
SKA2-202ENST00000437036 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
SKA2-202ENST00000437036 C5P01031 1676 aa18.96■□□□□ 0.63
SKA2-202ENST00000437036 RPS6KA4O75676 772 aa18.96■□□□□ 0.63
SKA2-202ENST00000437036 A1BGP04217 495 aa18.96■□□□□ 0.63
SKA2-202ENST00000437036 CCDC30Q5VVM6 783 aa18.96■□□□□ 0.63
SKA2-202ENST00000437036 INTS5Q6P9B9 1019 aaKnown RBP18.96■□□□□ 0.63
SKA2-202ENST00000437036 TSPYL6Q8N831 410 aa18.96■□□□□ 0.63
SKA2-202ENST00000437036 FLAD1Q8NFF5 587 aa18.96■□□□□ 0.63
SKA2-202ENST00000437036 TJP1Q07157 1748 aa18.96■□□□□ 0.63
SKA2-202ENST00000437036 NUP188Q5SRE5 1749 aa18.95■□□□□ 0.62
SKA2-202ENST00000437036 CANXP27824 592 aaKnown RBP18.95■□□□□ 0.62
SKA2-202ENST00000437036 ZNF827Q17R98 1081 aa18.95■□□□□ 0.62
SKA2-202ENST00000437036 NECTIN2Q92692 538 aa18.95■□□□□ 0.62
SKA2-202ENST00000437036 ANO8Q9HCE9 1232 aaPredicted RBP18.95■□□□□ 0.62
SKA2-202ENST00000437036 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
SKA2-202ENST00000437036 CT47B1P0C2W7 299 aaPredicted RBP18.94■□□□□ 0.62
SKA2-202ENST00000437036 ZBTB1Q9Y2K1 713 aa18.94■□□□□ 0.62
SKA2-202ENST00000437036 TAF1LQ8IZX4 1826 aa18.93■□□□□ 0.62
SKA2-202ENST00000437036 VAMP4O75379 141 aa18.93■□□□□ 0.62
SKA2-202ENST00000437036 ADRA2BP18089 450 aa18.93■□□□□ 0.62
SKA2-202ENST00000437036 SSFA2P28290 1259 aa18.93■□□□□ 0.62
SKA2-202ENST00000437036 IL6STP40189 918 aaPredicted RBP18.93■□□□□ 0.62
SKA2-202ENST00000437036 ZNF428Q96B54 188 aa18.93■□□□□ 0.62
SKA2-202ENST00000437036 STK31Q9BXU1 1019 aa18.93■□□□□ 0.62
SKA2-202ENST00000437036 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
SKA2-202ENST00000437036 COL5A3P25940 1745 aaPredicted RBP18.92■□□□□ 0.62
SKA2-202ENST00000437036 A0A087WZG4 1122 aa18.92■□□□□ 0.62
SKA2-202ENST00000437036 TRAPPC3LQ5T215 181 aa18.92■□□□□ 0.62
SKA2-202ENST00000437036 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
SKA2-202ENST00000437036 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
SKA2-202ENST00000437036 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
SKA2-202ENST00000437036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
SKA2-202ENST00000437036 PHF14O94880 888 aa18.91■□□□□ 0.62
SKA2-202ENST00000437036 MYL6BP14649 208 aa18.91■□□□□ 0.62
SKA2-202ENST00000437036 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
SKA2-202ENST00000437036 MSH5O43196 834 aa18.9■□□□□ 0.62
SKA2-202ENST00000437036 RFC4P35249 363 aa18.9■□□□□ 0.62
SKA2-202ENST00000437036 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
SKA2-202ENST00000437036 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
SKA2-202ENST00000437036 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
SKA2-202ENST00000437036 HYPKQ9NX55 129 aa18.9■□□□□ 0.62
SKA2-202ENST00000437036 CHPF2Q9P2E5 772 aa18.9■□□□□ 0.62
SKA2-202ENST00000437036 PIP4K2AP48426 406 aaPredicted RBP18.89■□□□□ 0.61
SKA2-202ENST00000437036 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.61
SKA2-202ENST00000437036 ARXQ96QS3 562 aa18.89■□□□□ 0.61
SKA2-202ENST00000437036 PDIA6Q15084 440 aa18.88■□□□□ 0.61
SKA2-202ENST00000437036 COL15A1P39059 1388 aa18.88■□□□□ 0.61
SKA2-202ENST00000437036 ZPR1O75312 459 aa18.87■□□□□ 0.61
SKA2-202ENST00000437036 PNPLA7Q6ZV29 1317 aa18.87■□□□□ 0.61
SKA2-202ENST00000437036 MYH14Q7Z406 1995 aaKnown RBP18.87■□□□□ 0.61
SKA2-202ENST00000437036 ARHGEF1Q92888 912 aaKnown RBP18.87■□□□□ 0.61
SKA2-202ENST00000437036 TCERG1O14776 1098 aaKnown RBP18.86■□□□□ 0.61
SKA2-202ENST00000437036 ANXA1P04083 346 aa18.86■□□□□ 0.61
SKA2-202ENST00000437036 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
SKA2-202ENST00000437036 ALDH1L2Q3SY69 923 aa18.86■□□□□ 0.61
SKA2-202ENST00000437036 KIF6Q6ZMV9 814 aa18.86■□□□□ 0.61
SKA2-202ENST00000437036 COL23A1Q86Y22 540 aaPredicted RBP18.86■□□□□ 0.61
SKA2-202ENST00000437036 PSDA5PKW4 1024 aaPredicted RBP18.85■□□□□ 0.61
SKA2-202ENST00000437036 PROSER3Q2NL68 480 aa18.85■□□□□ 0.61
SKA2-202ENST00000437036 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
SKA2-202ENST00000437036 AMIGO3Q86WK7 504 aa18.85■□□□□ 0.61
SKA2-202ENST00000437036 DZIP3Q86Y13 1208 aaKnown RBP18.85■□□□□ 0.61
SKA2-202ENST00000437036 AIMP1Q12904 312 aaKnown RBP18.84■□□□□ 0.61
SKA2-202ENST00000437036 COPS6Q7L5N1 327 aa18.84■□□□□ 0.61
SKA2-202ENST00000437036 SLC16A10Q8TF71 515 aa18.84■□□□□ 0.61
SKA2-202ENST00000437036 XAGE3Q8WTP9 111 aa18.84■□□□□ 0.61
SKA2-202ENST00000437036 NARFQ9UHQ1 456 aa18.84■□□□□ 0.61
SKA2-202ENST00000437036 UBR3Q6ZT12 1888 aa18.84■□□□□ 0.61
SKA2-202ENST00000437036 DDX58O95786 925 aaKnown RBP18.83■□□□□ 0.6
SKA2-202ENST00000437036 SMC4Q9NTJ3 1288 aa18.83■□□□□ 0.6
SKA2-202ENST00000437036 TBC1D2BQ9UPU7 963 aa18.83■□□□□ 0.6
SKA2-202ENST00000437036 LRP10Q7Z4F1 713 aa18.82■□□□□ 0.6
SKA2-202ENST00000437036 SSH1Q8WYL5 1049 aa18.82■□□□□ 0.6
SKA2-202ENST00000437036 ZNF652Q9Y2D9 606 aa18.82■□□□□ 0.6
SKA2-202ENST00000437036 USP42Q9H9J4 1324 aaKnown RBP18.81■□□□□ 0.6
SKA2-202ENST00000437036 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
SKA2-202ENST00000437036 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
SKA2-202ENST00000437036 QSER1Q2KHR3 1735 aa18.8■□□□□ 0.6
SKA2-202ENST00000437036 MAP3K15Q6ZN16 1313 aa18.8■□□□□ 0.6
SKA2-202ENST00000437036 RGL2O15211 777 aa18.8■□□□□ 0.6
SKA2-202ENST00000437036 USPL1Q5W0Q7 1092 aa18.8■□□□□ 0.6
SKA2-202ENST00000437036 TTLL7Q6ZT98 887 aa18.8■□□□□ 0.6
SKA2-202ENST00000437036 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
SKA2-202ENST00000437036 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
SKA2-202ENST00000437036 PHAXQ9H814 394 aaKnown RBP18.8■□□□□ 0.6
SKA2-202ENST00000437036 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
SKA2-202ENST00000437036 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms