RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 COL23A1Q86Y22 540 aaPredicted RBP22.74■■□□□ 1.23
CCDC144A-209ENST00000436374 VSIG10Q8N0Z9 540 aa22.74■■□□□ 1.23
CCDC144A-209ENST00000436374 TEX13AQ9BXU3 409 aaPredicted RBP22.74■■□□□ 1.23
CCDC144A-209ENST00000436374 RCAN3Q9UKA8 241 aa22.74■■□□□ 1.23
CCDC144A-209ENST00000436374 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
CCDC144A-209ENST00000436374 SNRPA1P09661 255 aaKnown RBP22.72■■□□□ 1.23
CCDC144A-209ENST00000436374 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
CCDC144A-209ENST00000436374 KDM3BQ7LBC6 1761 aa22.71■■□□□ 1.23
CCDC144A-209ENST00000436374 YY1P25490 414 aa22.71■■□□□ 1.23
CCDC144A-209ENST00000436374 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.71■■□□□ 1.23
CCDC144A-209ENST00000436374 HEG1Q9ULI3 1381 aa22.71■■□□□ 1.23
CCDC144A-209ENST00000436374 CCDC30Q5VVM6 783 aa22.7■■□□□ 1.22
CCDC144A-209ENST00000436374 AMIGO3Q86WK7 504 aa22.7■■□□□ 1.22
CCDC144A-209ENST00000436374 UBR3Q6ZT12 1888 aa22.7■■□□□ 1.22
CCDC144A-209ENST00000436374 VIRMAQ69YN4 1812 aaKnown RBP22.69■■□□□ 1.22
CCDC144A-209ENST00000436374 DCAF8L1A6NGE4 600 aa22.69■■□□□ 1.22
CCDC144A-209ENST00000436374 MSH5O43196 834 aa22.69■■□□□ 1.22
CCDC144A-209ENST00000436374 VAMP4O75379 141 aa22.69■■□□□ 1.22
CCDC144A-209ENST00000436374 C8orf58Q8NAV2 365 aa22.69■■□□□ 1.22
CCDC144A-209ENST00000436374 UTRNP46939 3433 aa22.69■■□□□ 1.22
CCDC144A-209ENST00000436374 GIGYF1O75420 1035 aaPredicted RBP22.68■■□□□ 1.22
CCDC144A-209ENST00000436374 SLC39A6Q13433 755 aa22.68■■□□□ 1.22
CCDC144A-209ENST00000436374 SMIM5Q71RC9 77 aa22.68■■□□□ 1.22
CCDC144A-209ENST00000436374 STK31Q9BXU1 1019 aa22.68■■□□□ 1.22
CCDC144A-209ENST00000436374 ATG3Q9NT62 314 aa22.68■■□□□ 1.22
CCDC144A-209ENST00000436374 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
CCDC144A-209ENST00000436374 POLD1P28340 1107 aa22.67■■□□□ 1.22
CCDC144A-209ENST00000436374 ZNF496Q96IT1 587 aaPredicted RBP22.67■■□□□ 1.22
CCDC144A-209ENST00000436374 RARSP54136 660 aaKnown RBP22.66■■□□□ 1.22
CCDC144A-209ENST00000436374 BRPF1P55201 1214 aaPredicted RBP22.66■■□□□ 1.22
CCDC144A-209ENST00000436374 ERBB4Q15303 1308 aa22.65■■□□□ 1.22
CCDC144A-209ENST00000436374 KIF16BQ96L93 1317 aa22.65■■□□□ 1.22
CCDC144A-209ENST00000436374 LOC102724428A0A0B4J2F2 783 aa22.65■■□□□ 1.22
CCDC144A-209ENST00000436374 SIK1P57059 783 aa22.65■■□□□ 1.22
CCDC144A-209ENST00000436374 HDGFL1Q5TGJ6 251 aa22.65■■□□□ 1.22
CCDC144A-209ENST00000436374 MSL1Q68DK7 614 aa22.65■■□□□ 1.22
CCDC144A-209ENST00000436374 ELL2O00472 640 aaPredicted RBP22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 KCNQ3O43525 872 aa22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 STARD3NLO95772 234 aa22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 ITPK1Q13572 414 aa22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 KLHL34Q8N239 644 aa22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 TSPYL6Q8N831 410 aa22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 LINC00116Q8NCU8 138 aa22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 AK7Q96M32 723 aa22.64■■□□□ 1.21
CCDC144A-209ENST00000436374 CHD4Q14839 1912 aa22.63■■□□□ 1.21
CCDC144A-209ENST00000436374 PTCD1O75127 700 aaKnown RBP22.63■■□□□ 1.21
CCDC144A-209ENST00000436374 MS4A1P11836 297 aa22.63■■□□□ 1.21
CCDC144A-209ENST00000436374 ATP6V1AP38606 617 aa22.63■■□□□ 1.21
CCDC144A-209ENST00000436374 FLAD1Q8NFF5 587 aa22.63■■□□□ 1.21
CCDC144A-209ENST00000436374 RBM42Q9BTD8 480 aaKnown RBP22.63■■□□□ 1.21
CCDC144A-209ENST00000436374 SMC4Q9NTJ3 1288 aa22.63■■□□□ 1.21
CCDC144A-209ENST00000436374 KCPQ6ZWJ8 1503 aa22.62■■□□□ 1.21
CCDC144A-209ENST00000436374 NLGN2Q8NFZ4 835 aa22.62■■□□□ 1.21
CCDC144A-209ENST00000436374 DBF4Q9UBU7 674 aaPredicted RBP22.62■■□□□ 1.21
CCDC144A-209ENST00000436374 UBR2Q8IWV8 1755 aa22.61■■□□□ 1.21
CCDC144A-209ENST00000436374 SLC4A9Q96Q91 983 aa22.6■■□□□ 1.21
CCDC144A-209ENST00000436374 CANXP27824 592 aaKnown RBP22.59■■□□□ 1.21
CCDC144A-209ENST00000436374 KRT24Q2M2I5 525 aa22.59■■□□□ 1.21
CCDC144A-209ENST00000436374 SSH1Q8WYL5 1049 aa22.59■■□□□ 1.21
CCDC144A-209ENST00000436374 HYPKQ9NX55 129 aa22.59■■□□□ 1.21
CCDC144A-209ENST00000436374 PHF14O94880 888 aa22.58■■□□□ 1.21
CCDC144A-209ENST00000436374 EIF2S2P20042 333 aaKnown RBP22.58■■□□□ 1.21
CCDC144A-209ENST00000436374 ARHGAP45Q92619 1136 aa22.58■■□□□ 1.21
CCDC144A-209ENST00000436374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.57■■□□□ 1.2
CCDC144A-209ENST00000436374 ZNF831Q5JPB2 1677 aa22.57■■□□□ 1.2
CCDC144A-209ENST00000436374 COL5A3P25940 1745 aaPredicted RBP22.57■■□□□ 1.2
CCDC144A-209ENST00000436374 PTPRCP08575 1304 aa22.57■■□□□ 1.2
CCDC144A-209ENST00000436374 SLC4A2P04920 1241 aa22.56■■□□□ 1.2
CCDC144A-209ENST00000436374 DDX21Q9NR30 783 aaKnown RBP eCLIP22.56■■□□□ 1.2
CCDC144A-209ENST00000436374 RNF123Q5XPI4 1314 aa22.56■■□□□ 1.2
CCDC144A-209ENST00000436374 NEFLP07196 543 aa22.55■■□□□ 1.2
CCDC144A-209ENST00000436374 NPM2Q86SE8 214 aaKnown RBP22.55■■□□□ 1.2
CCDC144A-209ENST00000436374 MRPL50Q8N5N7 158 aaKnown RBP22.55■■□□□ 1.2
CCDC144A-209ENST00000436374 MYH14Q7Z406 1995 aaKnown RBP22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 CICQ96RK0 1608 aaPredicted RBP22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 SSFA2P28290 1259 aa22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 RRP1P56182 461 aaKnown RBP22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 GPR162Q16538 588 aa22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 ZKSCAN2Q63HK3 967 aa22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 API5Q9BZZ5 524 aaKnown RBP22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 SUPT16HQ9Y5B9 1047 aaKnown RBP22.54■■□□□ 1.2
CCDC144A-209ENST00000436374 GNPATO15228 680 aa22.53■■□□□ 1.2
CCDC144A-209ENST00000436374 USP16Q9Y5T5 823 aa22.53■■□□□ 1.2
CCDC144A-209ENST00000436374 BCAR3O75815 825 aa22.52■■□□□ 1.2
CCDC144A-209ENST00000436374 DDX58O95786 925 aaKnown RBP22.52■■□□□ 1.2
CCDC144A-209ENST00000436374 LAMB4A4D0S4 1761 aa22.51■■□□□ 1.19
CCDC144A-209ENST00000436374 CYP19A1P11511 503 aaPredicted RBP22.51■■□□□ 1.19
CCDC144A-209ENST00000436374 PDE3AQ14432 1141 aa22.51■■□□□ 1.19
CCDC144A-209ENST00000436374 DNAJC10Q8IXB1 793 aa22.51■■□□□ 1.19
CCDC144A-209ENST00000436374 PELP1Q8IZL8 1130 aaKnown RBP22.51■■□□□ 1.19
CCDC144A-209ENST00000436374 CHPF2Q9P2E5 772 aa22.51■■□□□ 1.19
CCDC144A-209ENST00000436374 YBX3P16989 372 aaKnown RBP eCLIP22.5■■□□□ 1.19
CCDC144A-209ENST00000436374 RC3H1Q5TC82 1133 aaKnown RBP22.5■■□□□ 1.19
CCDC144A-209ENST00000436374 FRAT1Q92837 279 aaPredicted RBP22.5■■□□□ 1.19
CCDC144A-209ENST00000436374 BCL2L13Q9BXK5 485 aa22.5■■□□□ 1.19
CCDC144A-209ENST00000436374 RTCBQ9Y3I0 505 aaKnown RBP22.5■■□□□ 1.19
CCDC144A-209ENST00000436374 ATF7IPQ6VMQ6 1270 aa22.49■■□□□ 1.19
CCDC144A-209ENST00000436374 ZNF784Q8NCA9 323 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms