RNA–Protein interactions for RNA: ENST00000436280.5

GPN1-204, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2

Gene GPN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-204ENST00000436280 UTRNP46939 3433 aa18.56■□□□□ 0.56
GPN1-204ENST00000436280 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
GPN1-204ENST00000436280 ZBTB1Q9Y2K1 713 aa18.56■□□□□ 0.56
GPN1-204ENST00000436280 COL15A1P39059 1388 aa18.55■□□□□ 0.56
GPN1-204ENST00000436280 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
GPN1-204ENST00000436280 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
GPN1-204ENST00000436280 DCTN1Q14203 1278 aa18.54■□□□□ 0.56
GPN1-204ENST00000436280 NFE2L2Q16236 605 aa18.54■□□□□ 0.56
GPN1-204ENST00000436280 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
GPN1-204ENST00000436280 A0A087WZG4 1122 aa18.53■□□□□ 0.56
GPN1-204ENST00000436280 FKBP8Q14318 412 aa18.53■□□□□ 0.56
GPN1-204ENST00000436280 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
GPN1-204ENST00000436280 USPL1Q5W0Q7 1092 aa18.53■□□□□ 0.56
GPN1-204ENST00000436280 YBX3P16989 372 aaKnown RBP eCLIP18.52■□□□□ 0.562e-11■■■■□ 20.9
GPN1-204ENST00000436280 TGFB2P61812 414 aa18.52■□□□□ 0.56
GPN1-204ENST00000436280 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.56
GPN1-204ENST00000436280 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
GPN1-204ENST00000436280 KCNQ3O43525 872 aa18.51■□□□□ 0.55
GPN1-204ENST00000436280 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
GPN1-204ENST00000436280 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
GPN1-204ENST00000436280 SNRPA1P09661 255 aaKnown RBP18.5■□□□□ 0.55
GPN1-204ENST00000436280 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
GPN1-204ENST00000436280 EIF5P55010 431 aaKnown RBP18.5■□□□□ 0.55
GPN1-204ENST00000436280 PRKRIP1Q9H875 184 aaPredicted RBP18.5■□□□□ 0.55
GPN1-204ENST00000436280 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
GPN1-204ENST00000436280 ZNF330Q9Y3S2 320 aaPredicted RBP18.49■□□□□ 0.55
GPN1-204ENST00000436280 GOLGB1Q14789 3259 aaKnown RBP18.48■□□□□ 0.55
GPN1-204ENST00000436280 TM4SF1P30408 202 aa18.48■□□□□ 0.55
GPN1-204ENST00000436280 DDR1Q08345 913 aa18.48■□□□□ 0.55
GPN1-204ENST00000436280 PXDNLA1KZ92 1463 aa18.47■□□□□ 0.55
GPN1-204ENST00000436280 KIAA1551Q9HCM1 1747 aa18.47■□□□□ 0.55
GPN1-204ENST00000436280 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
GPN1-204ENST00000436280 A1BGP04217 495 aa18.47■□□□□ 0.55
GPN1-204ENST00000436280 LMOD3Q0VAK6 560 aa18.47■□□□□ 0.55
GPN1-204ENST00000436280 USP16Q9Y5T5 823 aa18.46■□□□□ 0.55
GPN1-204ENST00000436280 A0A0G2JLW4 131 aa18.45■□□□□ 0.54
GPN1-204ENST00000436280 RIPK4P57078 832 aa18.45■□□□□ 0.54
GPN1-204ENST00000436280 NFIXQ14938 502 aa18.45■□□□□ 0.54
GPN1-204ENST00000436280 BCL2L12Q9HB09 334 aa18.45■□□□□ 0.54
GPN1-204ENST00000436280 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
GPN1-204ENST00000436280 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
GPN1-204ENST00000436280 N4BP2Q86UW6 1770 aaPredicted RBP18.45■□□□□ 0.54
GPN1-204ENST00000436280 ZNF784Q8NCA9 323 aaPredicted RBP18.44■□□□□ 0.54
GPN1-204ENST00000436280 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
GPN1-204ENST00000436280 PRAMEF22A3QJZ6 481 aa18.43■□□□□ 0.54
GPN1-204ENST00000436280 DPEP1P16444 411 aa18.43■□□□□ 0.54
GPN1-204ENST00000436280 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
GPN1-204ENST00000436280 RUNDC1Q96C34 613 aa18.43■□□□□ 0.54
GPN1-204ENST00000436280 THUMPD2Q9BTF0 503 aaKnown RBP18.43■□□□□ 0.54
GPN1-204ENST00000436280 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
GPN1-204ENST00000436280 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
GPN1-204ENST00000436280 SERPINB2P05120 415 aa18.42■□□□□ 0.54
GPN1-204ENST00000436280 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
GPN1-204ENST00000436280 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
GPN1-204ENST00000436280 KDM3BQ7LBC6 1761 aa18.41■□□□□ 0.54
GPN1-204ENST00000436280 BICDL1Q6ZP65 573 aa18.41■□□□□ 0.54
GPN1-204ENST00000436280 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
GPN1-204ENST00000436280 PIM2Q9P1W9 311 aa18.41■□□□□ 0.54
GPN1-204ENST00000436280 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
GPN1-204ENST00000436280 LAMB4A4D0S4 1761 aa18.4■□□□□ 0.54
GPN1-204ENST00000436280 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
GPN1-204ENST00000436280 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
GPN1-204ENST00000436280 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
GPN1-204ENST00000436280 ADAMTS8Q9UP79 889 aa18.4■□□□□ 0.54
GPN1-204ENST00000436280 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
GPN1-204ENST00000436280 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.53
GPN1-204ENST00000436280 CAMTA2O94983 1202 aa18.39■□□□□ 0.53
GPN1-204ENST00000436280 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
GPN1-204ENST00000436280 TBC1D9BQ66K14 1250 aa18.39■□□□□ 0.53
GPN1-204ENST00000436280 SETDB2Q96T68 719 aa18.39■□□□□ 0.53
GPN1-204ENST00000436280 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
GPN1-204ENST00000436280 CARMIL3Q8ND23 1372 aa18.39■□□□□ 0.53
GPN1-204ENST00000436280 KCNA3P22001 575 aa18.38■□□□□ 0.53
GPN1-204ENST00000436280 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
GPN1-204ENST00000436280 DALRD3Q5D0E6 543 aaKnown RBP18.38■□□□□ 0.53
GPN1-204ENST00000436280 CLEC4GQ6UXB4 293 aa18.38■□□□□ 0.53
GPN1-204ENST00000436280 RRP7AQ9Y3A4 280 aaKnown RBP18.38■□□□□ 0.53
GPN1-204ENST00000436280 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
GPN1-204ENST00000436280 BCORQ6W2J9 1755 aa18.37■□□□□ 0.53
GPN1-204ENST00000436280 NBPF26B4DH59 902 aa18.37■□□□□ 0.53
GPN1-204ENST00000436280 RGL2O15211 777 aa18.37■□□□□ 0.53
GPN1-204ENST00000436280 NBPF10Q6P3W6 841 aaKnown RBP18.37■□□□□ 0.53
GPN1-204ENST00000436280 NBPF15Q8N660 670 aa18.37■□□□□ 0.53
GPN1-204ENST00000436280 NPHP1O15259 732 aa18.36■□□□□ 0.53
GPN1-204ENST00000436280 CHRNA5P30532 468 aa18.36■□□□□ 0.53
GPN1-204ENST00000436280 PDZRN3Q9UPQ7 1066 aa18.35■□□□□ 0.53
GPN1-204ENST00000436280 ARHGAP27Q6ZUM4 889 aa18.34■□□□□ 0.53
GPN1-204ENST00000436280 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
GPN1-204ENST00000436280 ARFGEF1Q9Y6D6 1849 aa18.34■□□□□ 0.53
GPN1-204ENST00000436280 ERBB4Q15303 1308 aa18.33■□□□□ 0.53
GPN1-204ENST00000436280 H0YIN7 160 aa18.33■□□□□ 0.52
GPN1-204ENST00000436280 PDE6BP35913 854 aa18.33■□□□□ 0.52
GPN1-204ENST00000436280 ST5P78524 1137 aa18.33■□□□□ 0.52
GPN1-204ENST00000436280 PRR5LQ6MZQ0 368 aa18.33■□□□□ 0.52
GPN1-204ENST00000436280 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
GPN1-204ENST00000436280 TRIM35Q9UPQ4 493 aa18.33■□□□□ 0.52
GPN1-204ENST00000436280 DLEC1Q9Y238 1755 aa18.32■□□□□ 0.52
GPN1-204ENST00000436280 C2CD5Q86YS7 1000 aa18.32■□□□□ 0.52
GPN1-204ENST00000436280 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
GPN1-204ENST00000436280 ADCY9O60503 1353 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms