RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 ATG3Q9NT62 314 aa19.21■□□□□ 0.67
TMEM40-204ENST00000435218 COG6Q9Y2V7 657 aa19.21■□□□□ 0.67
TMEM40-204ENST00000435218 ERBB4Q15303 1308 aa19.21■□□□□ 0.67
TMEM40-204ENST00000435218 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
TMEM40-204ENST00000435218 EIF2S2P20042 333 aaKnown RBP19.2■□□□□ 0.66
TMEM40-204ENST00000435218 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
TMEM40-204ENST00000435218 FLIIQ13045 1269 aa19.2■□□□□ 0.66
TMEM40-204ENST00000435218 G2E3Q7L622 706 aa19.2■□□□□ 0.66
TMEM40-204ENST00000435218 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
TMEM40-204ENST00000435218 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
TMEM40-204ENST00000435218 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
TMEM40-204ENST00000435218 A0A0G2JS52 829 aa19.19■□□□□ 0.66
TMEM40-204ENST00000435218 MYT1Q01538 1121 aa19.19■□□□□ 0.66
TMEM40-204ENST00000435218 NECTIN2Q92692 538 aa19.19■□□□□ 0.66
TMEM40-204ENST00000435218 DDX21Q9NR30 783 aaKnown RBP eCLIP19.19■□□□□ 0.66
TMEM40-204ENST00000435218 LY75O60449 1722 aa19.18■□□□□ 0.66
TMEM40-204ENST00000435218 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
TMEM40-204ENST00000435218 RREB1Q92766 1687 aa19.18■□□□□ 0.66
TMEM40-204ENST00000435218 INTS3Q68E01 1043 aaKnown RBP19.18■□□□□ 0.66
TMEM40-204ENST00000435218 SEPT12Q8IYM1 358 aa19.18■□□□□ 0.66
TMEM40-204ENST00000435218 TMEM57Q8N5G2 664 aa19.18■□□□□ 0.66
TMEM40-204ENST00000435218 TEX13AQ9BXU3 409 aaPredicted RBP19.18■□□□□ 0.66
TMEM40-204ENST00000435218 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
TMEM40-204ENST00000435218 RBM6P78332 1123 aaKnown RBP19.17■□□□□ 0.66
TMEM40-204ENST00000435218 PDIA6Q15084 440 aa19.17■□□□□ 0.66
TMEM40-204ENST00000435218 USP16Q9Y5T5 823 aa19.17■□□□□ 0.66
TMEM40-204ENST00000435218 ARFGEF2Q9Y6D5 1785 aa19.16■□□□□ 0.66
TMEM40-204ENST00000435218 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
TMEM40-204ENST00000435218 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
TMEM40-204ENST00000435218 NUP188Q5SRE5 1749 aa19.16■□□□□ 0.66
TMEM40-204ENST00000435218 PTCD1O75127 700 aaKnown RBP19.15■□□□□ 0.66
TMEM40-204ENST00000435218 FKBP5Q13451 457 aaPredicted RBP19.15■□□□□ 0.66
TMEM40-204ENST00000435218 ITPRIPQ8IWB1 547 aa19.15■□□□□ 0.66
TMEM40-204ENST00000435218 ACSBG1Q96GR2 724 aa19.15■□□□□ 0.66
TMEM40-204ENST00000435218 CCDC136Q96JN2 1154 aa19.15■□□□□ 0.66
TMEM40-204ENST00000435218 PHAXQ9H814 394 aaKnown RBP19.15■□□□□ 0.66
TMEM40-204ENST00000435218 LRP10Q7Z4F1 713 aa19.14■□□□□ 0.65
TMEM40-204ENST00000435218 SMARCC1Q92922 1105 aaPredicted RBP19.14■□□□□ 0.65
TMEM40-204ENST00000435218 TAF1LQ8IZX4 1826 aa19.13■□□□□ 0.65
TMEM40-204ENST00000435218 PROSER3Q2NL68 480 aa19.13■□□□□ 0.65
TMEM40-204ENST00000435218 CCT4P50991 539 aaKnown RBP19.12■□□□□ 0.65
TMEM40-204ENST00000435218 ATP10DQ9P241 1426 aa19.12■□□□□ 0.65
TMEM40-204ENST00000435218 B4GALNT3Q6L9W6 998 aa19.11■□□□□ 0.65
TMEM40-204ENST00000435218 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
TMEM40-204ENST00000435218 AFDNP55196 1824 aaKnown RBP19.11■□□□□ 0.65
TMEM40-204ENST00000435218 ADCY9O60503 1353 aa19.11■□□□□ 0.65
TMEM40-204ENST00000435218 ZBTB7BO15156 539 aaPredicted RBP19.1■□□□□ 0.65
TMEM40-204ENST00000435218 KCNQ2O43526 872 aa19.1■□□□□ 0.65
TMEM40-204ENST00000435218 ANXA1P04083 346 aa19.1■□□□□ 0.65
TMEM40-204ENST00000435218 SLC4A9Q96Q91 983 aa19.1■□□□□ 0.65
TMEM40-204ENST00000435218 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
TMEM40-204ENST00000435218 PALLDQ8WX93 1383 aa19.1■□□□□ 0.65
TMEM40-204ENST00000435218 IBTKQ9P2D0 1353 aaPredicted RBP19.1■□□□□ 0.65
TMEM40-204ENST00000435218 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
TMEM40-204ENST00000435218 DDX58O95786 925 aaKnown RBP19.1■□□□□ 0.65
TMEM40-204ENST00000435218 F6X3S4 739 aa19.09■□□□□ 0.65
TMEM40-204ENST00000435218 STARD3NLO95772 234 aa19.09■□□□□ 0.65
TMEM40-204ENST00000435218 KSR2Q6VAB6 950 aa19.09■□□□□ 0.65
TMEM40-204ENST00000435218 KRT27Q7Z3Y8 459 aa19.09■□□□□ 0.65
TMEM40-204ENST00000435218 DNAJC10Q8IXB1 793 aa19.09■□□□□ 0.65
TMEM40-204ENST00000435218 NBPF26B4DH59 902 aa19.08■□□□□ 0.64
TMEM40-204ENST00000435218 NBPF14Q5TI25 921 aa19.08■□□□□ 0.64
TMEM40-204ENST00000435218 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.64
TMEM40-204ENST00000435218 NBPF15Q8N660 670 aa19.08■□□□□ 0.64
TMEM40-204ENST00000435218 DNAAF4Q8WXU2 420 aa19.08■□□□□ 0.64
TMEM40-204ENST00000435218 RGS17Q9UGC6 210 aaPredicted RBP19.08■□□□□ 0.64
TMEM40-204ENST00000435218 ANKRD36CQ5JPF3 1778 aa19.07■□□□□ 0.64
TMEM40-204ENST00000435218 LOC102724428A0A0B4J2F2 783 aa19.07■□□□□ 0.64
TMEM40-204ENST00000435218 PI4KAP2A4QPH2 592 aa19.07■□□□□ 0.64
TMEM40-204ENST00000435218 MYL6BP14649 208 aa19.07■□□□□ 0.64
TMEM40-204ENST00000435218 SIK1P57059 783 aa19.07■□□□□ 0.64
TMEM40-204ENST00000435218 FAM196AQ6ZSG2 479 aa19.07■□□□□ 0.64
TMEM40-204ENST00000435218 PI4KAP1Q8N8J0 262 aa19.07■□□□□ 0.64
TMEM40-204ENST00000435218 CYP19A1P11511 503 aaPredicted RBP19.06■□□□□ 0.64
TMEM40-204ENST00000435218 RXRBP28702 533 aa19.06■□□□□ 0.64
TMEM40-204ENST00000435218 SLC4A10Q6U841 1118 aa19.05■□□□□ 0.64
TMEM40-204ENST00000435218 COPS6Q7L5N1 327 aa19.05■□□□□ 0.64
TMEM40-204ENST00000435218 XAGE3Q8WTP9 111 aa19.05■□□□□ 0.64
TMEM40-204ENST00000435218 NUP98P52948 1817 aa19.05■□□□□ 0.64
TMEM40-204ENST00000435218 A1BGP04217 495 aa19.05■□□□□ 0.64
TMEM40-204ENST00000435218 FAM182BQ5T319 152 aa19.05■□□□□ 0.64
TMEM40-204ENST00000435218 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
TMEM40-204ENST00000435218 BEND3Q5T5X7 828 aa19.04■□□□□ 0.64
TMEM40-204ENST00000435218 BCL11BQ9C0K0 894 aaPredicted RBP19.04■□□□□ 0.64
TMEM40-204ENST00000435218 MAP3K2Q9Y2U5 619 aa19.04■□□□□ 0.64
TMEM40-204ENST00000435218 PCDHB15Q9Y5E8 787 aa19.04■□□□□ 0.64
TMEM40-204ENST00000435218 RGPD3A6NKT7 1758 aaPredicted RBP19.03■□□□□ 0.64
TMEM40-204ENST00000435218 RGPD4Q7Z3J3 1758 aa19.03■□□□□ 0.64
TMEM40-204ENST00000435218 ATP6V1AP38606 617 aa19.03■□□□□ 0.64
TMEM40-204ENST00000435218 ANKRD13DQ6ZTN6 518 aa19.03■□□□□ 0.64
TMEM40-204ENST00000435218 SRCIN1Q9C0H9 1055 aa19.03■□□□□ 0.64
TMEM40-204ENST00000435218 EP400Q96L91 3159 aa19.03■□□□□ 0.64
TMEM40-204ENST00000435218 ALDH1L1O75891 902 aa19.02■□□□□ 0.64
TMEM40-204ENST00000435218 CENPQQ7L2Z9 268 aaPredicted RBP19.02■□□□□ 0.64
TMEM40-204ENST00000435218 PTF1AQ7RTS3 328 aa19.02■□□□□ 0.64
TMEM40-204ENST00000435218 PLBD2Q8NHP8 589 aa19.02■□□□□ 0.64
TMEM40-204ENST00000435218 BCORQ6W2J9 1755 aa19.02■□□□□ 0.64
TMEM40-204ENST00000435218 TNS1Q9HBL0 1735 aaKnown RBP19.01■□□□□ 0.63
TMEM40-204ENST00000435218 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
TMEM40-204ENST00000435218 AIMP1Q12904 312 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms