RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 RIMS2Q9UQ26 1411 aa9.76□□□□□ -0.85
GTF2A1-202ENST00000434192 J3QL48 77 aa9.76□□□□□ -0.85
GTF2A1-202ENST00000434192 SH3BP2P78314 561 aa9.76□□□□□ -0.85
GTF2A1-202ENST00000434192 DDRGK1Q96HY6 314 aa9.76□□□□□ -0.85
GTF2A1-202ENST00000434192 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
GTF2A1-202ENST00000434192 TMEM2Q9UHN6 1383 aa9.75□□□□□ -0.85
GTF2A1-202ENST00000434192 EHBP1Q8NDI1 1231 aa9.75□□□□□ -0.85
GTF2A1-202ENST00000434192 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
GTF2A1-202ENST00000434192 KNDC1Q76NI1 1749 aa9.75□□□□□ -0.85
GTF2A1-202ENST00000434192 ARHGEF28Q8N1W1 1705 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-202ENST00000434192 XRN1Q8IZH2 1706 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-202ENST00000434192 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
GTF2A1-202ENST00000434192 SMPD1P17405 629 aa9.74□□□□□ -0.85
GTF2A1-202ENST00000434192 ZNF787Q6DD87 383 aa9.74□□□□□ -0.85
GTF2A1-202ENST00000434192 ROCK2O75116 1388 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-202ENST00000434192 ASXL1Q8IXJ9 1541 aa9.73□□□□□ -0.85
GTF2A1-202ENST00000434192 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
GTF2A1-202ENST00000434192 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-202ENST00000434192 NBPF8Q3BBV2 869 aa9.73□□□□□ -0.85
GTF2A1-202ENST00000434192 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-202ENST00000434192 QRICH2Q9H0J4 1663 aa9.73□□□□□ -0.85
GTF2A1-202ENST00000434192 GPRASP1Q5JY77 1395 aa9.73□□□□□ -0.85
GTF2A1-202ENST00000434192 NKTRP30414 1462 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 ADGRB1O14514 1584 aa9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 ALDH1A1P00352 501 aa9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 F12P00748 615 aaPredicted RBP9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 SH3D19Q5HYK7 790 aa9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 HELBQ8NG08 1087 aaPredicted RBP9.72□□□□□ -0.85
GTF2A1-202ENST00000434192 AVPP01185 164 aa9.71□□□□□ -0.86
GTF2A1-202ENST00000434192 TPRNQ4KMQ1 711 aa9.71□□□□□ -0.86
GTF2A1-202ENST00000434192 ADGRF5Q8IZF2 1346 aa9.71□□□□□ -0.86
GTF2A1-202ENST00000434192 POTECB2RU33 542 aa9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 AXIN1O15169 862 aa9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 SIAH2O43255 324 aa9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 LTKP29376 864 aa9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 DACH1Q9UI36 760 aa9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 EID1Q9Y6B2 187 aa9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 USP47Q96K76 1375 aa9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.7□□□□□ -0.86
GTF2A1-202ENST00000434192 TXNDC2Q86VQ3 553 aa9.69□□□□□ -0.86
GTF2A1-202ENST00000434192 NALCNQ8IZF0 1738 aa9.69□□□□□ -0.86
GTF2A1-202ENST00000434192 HPS1Q92902 700 aa9.69□□□□□ -0.86
GTF2A1-202ENST00000434192 PLEKHG1Q9ULL1 1385 aa9.69□□□□□ -0.86
GTF2A1-202ENST00000434192 ROBO1Q9Y6N7 1651 aa9.69□□□□□ -0.86
GTF2A1-202ENST00000434192 EIF3AQ14152 1382 aaKnown RBP9.68□□□□□ -0.86
GTF2A1-202ENST00000434192 CTDSPL2Q05D32 466 aa9.68□□□□□ -0.86
GTF2A1-202ENST00000434192 CARD11Q9BXL7 1154 aa9.68□□□□□ -0.86
GTF2A1-202ENST00000434192 EIF4G2P78344 907 aaKnown RBP eCLIP9.67□□□□□ -0.86
GTF2A1-202ENST00000434192 CTC1Q2NKJ3 1217 aa9.67□□□□□ -0.86
GTF2A1-202ENST00000434192 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
GTF2A1-202ENST00000434192 IL27Q8NEV9 243 aa9.67□□□□□ -0.86
GTF2A1-202ENST00000434192 FOXJ1Q92949 421 aa9.67□□□□□ -0.86
GTF2A1-202ENST00000434192 PHLPP1O60346 1717 aa9.66□□□□□ -0.86
GTF2A1-202ENST00000434192 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
GTF2A1-202ENST00000434192 TLL2Q9Y6L7 1015 aa9.66□□□□□ -0.86
GTF2A1-202ENST00000434192 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
GTF2A1-202ENST00000434192 DLC1Q96QB1 1528 aa9.66□□□□□ -0.86
GTF2A1-202ENST00000434192 ADAMTS13Q76LX8 1427 aa9.65□□□□□ -0.86
GTF2A1-202ENST00000434192 VARSP26640 1264 aaKnown RBP9.65□□□□□ -0.86
GTF2A1-202ENST00000434192 AGERQ15109 404 aa9.65□□□□□ -0.86
GTF2A1-202ENST00000434192 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.86
GTF2A1-202ENST00000434192 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
GTF2A1-202ENST00000434192 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
GTF2A1-202ENST00000434192 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
GTF2A1-202ENST00000434192 NBPF1Q3BBV0 1214 aa9.64□□□□□ -0.87
GTF2A1-202ENST00000434192 LRRN4Q8WUT4 740 aa9.64□□□□□ -0.87
GTF2A1-202ENST00000434192 C14orf93Q9H972 538 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-202ENST00000434192 YTHDC2Q9H6S0 1430 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-202ENST00000434192 MED1Q15648 1581 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-202ENST00000434192 HSPA5P11021 654 aaKnown RBP9.63□□□□□ -0.87
GTF2A1-202ENST00000434192 NHSL1Q5SYE7 1610 aa9.63□□□□□ -0.87
GTF2A1-202ENST00000434192 PIK3R4Q99570 1358 aa9.63□□□□□ -0.87
GTF2A1-202ENST00000434192 MYOM1P52179 1685 aa9.62□□□□□ -0.87
GTF2A1-202ENST00000434192 AP1G2O75843 785 aa9.62□□□□□ -0.87
GTF2A1-202ENST00000434192 PPP2R2DQ66LE6 453 aa9.62□□□□□ -0.87
GTF2A1-202ENST00000434192 TECPR2O15040 1411 aa9.62□□□□□ -0.87
GTF2A1-202ENST00000434192 TOM1O60784 492 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 ARID5BQ14865 1188 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 ARMC2Q8NEN0 867 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 GMPR2Q9P2T1 348 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 PTCH1Q13635 1447 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 ADGRB2O60241 1585 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 LRPPRCP42704 1394 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 SBNO2Q9Y2G9 1366 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 SHPRHQ149N8 1683 aa9.61□□□□□ -0.87
GTF2A1-202ENST00000434192 RGPD8O14715 1765 aaPredicted RBP9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 KCNA6P17658 529 aa9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 BPHLQ86WA6 291 aaPredicted RBP9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 PCMTD1Q96MG8 357 aaPredicted RBP9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 METP08581 1390 aa9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 TMEM94Q12767 1356 aa9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 COL16A1Q07092 1604 aaPredicted RBP9.6□□□□□ -0.87
GTF2A1-202ENST00000434192 NCOA3Q9Y6Q9 1424 aa9.59□□□□□ -0.87
GTF2A1-202ENST00000434192 ATP13A2Q9NQ11 1180 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms